Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2231 and EX28DRAFT_2232 overlap by 1 nucleotides EX28DRAFT_2232 and EX28DRAFT_2233 are separated by 178 nucleotides EX28DRAFT_2233 and EX28DRAFT_2234 are separated by 127 nucleotides EX28DRAFT_2234 and EX28DRAFT_2235 are separated by 67 nucleotides
EX28DRAFT_2231: EX28DRAFT_2231 - molybdate ABC transporter, permease protein, at 2,255,234 to 2,255,923
_2231
EX28DRAFT_2232: EX28DRAFT_2232 - molybdenum ABC transporter, periplasmic molybdate-binding protein, at 2,255,923 to 2,256,696
_2232
EX28DRAFT_2233: EX28DRAFT_2233 - Protein of unknown function (DUF2592), at 2,256,875 to 2,257,024
_2233
EX28DRAFT_2234: EX28DRAFT_2234 - ModE molybdate transport repressor domain/molybdenum-pterin binding domain, at 2,257,152 to 2,257,940
_2234
EX28DRAFT_2235: EX28DRAFT_2235 - ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA, at 2,258,008 to 2,259,480
_2235
Position (kb)
2256
2257
2258 Strain fitness (log2 ratio)
-1
0
1 at 2255.879 kb on + strand at 2255.880 kb on - strand at 2255.918 kb on + strand at 2255.919 kb on - strand at 2256.012 kb on + strand, within EX28DRAFT_2232 at 2256.038 kb on + strand, within EX28DRAFT_2232 at 2256.085 kb on + strand, within EX28DRAFT_2232 at 2256.085 kb on + strand, within EX28DRAFT_2232 at 2256.094 kb on - strand, within EX28DRAFT_2232 at 2256.487 kb on + strand, within EX28DRAFT_2232 at 2256.555 kb on - strand, within EX28DRAFT_2232 at 2256.555 kb on - strand, within EX28DRAFT_2232 at 2256.679 kb on + strand at 2256.701 kb on - strand at 2256.719 kb on + strand at 2256.734 kb on - strand at 2256.765 kb on + strand at 2256.807 kb on + strand at 2256.808 kb on - strand at 2256.808 kb on - strand at 2256.808 kb on - strand at 2256.808 kb on - strand at 2256.890 kb on - strand, within EX28DRAFT_2233 at 2256.945 kb on + strand, within EX28DRAFT_2233 at 2256.980 kb on + strand, within EX28DRAFT_2233 at 2257.019 kb on + strand at 2257.128 kb on + strand at 2257.128 kb on + strand at 2257.214 kb on + strand at 2257.234 kb on + strand, within EX28DRAFT_2234 at 2257.417 kb on - strand, within EX28DRAFT_2234 at 2257.579 kb on + strand, within EX28DRAFT_2234 at 2257.579 kb on + strand, within EX28DRAFT_2234 at 2257.579 kb on + strand, within EX28DRAFT_2234 at 2257.580 kb on - strand, within EX28DRAFT_2234 at 2257.590 kb on - strand, within EX28DRAFT_2234 at 2257.676 kb on + strand, within EX28DRAFT_2234 at 2257.873 kb on + strand at 2257.874 kb on - strand at 2257.978 kb on + strand at 2257.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,255,879 + -1.4 2,255,880 - +0.3 2,255,918 + +0.3 2,255,919 - -0.4 2,256,012 + EX28DRAFT_2232 0.11 -0.8 2,256,038 + EX28DRAFT_2232 0.15 +0.5 2,256,085 + EX28DRAFT_2232 0.21 -1.4 2,256,085 + EX28DRAFT_2232 0.21 +1.3 2,256,094 - EX28DRAFT_2232 0.22 -0.1 2,256,487 + EX28DRAFT_2232 0.73 -0.1 2,256,555 - EX28DRAFT_2232 0.82 +0.4 2,256,555 - EX28DRAFT_2232 0.82 +0.2 2,256,679 + +0.3 2,256,701 - +0.3 2,256,719 + +0.4 2,256,734 - -0.7 2,256,765 + -0.4 2,256,807 + -0.8 2,256,808 - +0.2 2,256,808 - +0.9 2,256,808 - +0.0 2,256,808 - -0.2 2,256,890 - EX28DRAFT_2233 0.10 +0.6 2,256,945 + EX28DRAFT_2233 0.47 -0.0 2,256,980 + EX28DRAFT_2233 0.70 +0.4 2,257,019 + -0.0 2,257,128 + -0.3 2,257,128 + -0.0 2,257,214 + -0.5 2,257,234 + EX28DRAFT_2234 0.10 +0.1 2,257,417 - EX28DRAFT_2234 0.34 +0.5 2,257,579 + EX28DRAFT_2234 0.54 +0.2 2,257,579 + EX28DRAFT_2234 0.54 -0.9 2,257,579 + EX28DRAFT_2234 0.54 +0.3 2,257,580 - EX28DRAFT_2234 0.54 -0.0 2,257,590 - EX28DRAFT_2234 0.56 +0.2 2,257,676 + EX28DRAFT_2234 0.66 -0.3 2,257,873 + +0.6 2,257,874 - +0.5 2,257,978 + -0.3 2,257,983 - -0.5
Or see this region's nucleotide sequence