Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1744 and EX28DRAFT_1745 are separated by 151 nucleotides EX28DRAFT_1745 and EX28DRAFT_1746 overlap by 23 nucleotides EX28DRAFT_1746 and EX28DRAFT_1747 are separated by 297 nucleotides
EX28DRAFT_1744: EX28DRAFT_1744 - NAD+ synthetase, at 1,758,721 to 1,759,548
_1744
EX28DRAFT_1745: EX28DRAFT_1745 - GIY-YIG catalytic domain, at 1,759,700 to 1,760,605
_1745
EX28DRAFT_1746: EX28DRAFT_1746 - Uncharacterized protein conserved in bacteria, at 1,760,583 to 1,761,140
_1746
EX28DRAFT_1747: EX28DRAFT_1747 - P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein, at 1,761,438 to 1,761,932
_1747
Position (kb)
1759
1760
1761 Strain fitness (log2 ratio)
-1
0
1
2 at 1758.701 kb on + strand at 1759.715 kb on - strand at 1759.724 kb on + strand at 1759.725 kb on - strand at 1759.725 kb on - strand at 1759.778 kb on + strand at 1759.778 kb on + strand at 1759.779 kb on - strand at 1759.839 kb on - strand, within EX28DRAFT_1745 at 1759.874 kb on + strand, within EX28DRAFT_1745 at 1759.875 kb on - strand, within EX28DRAFT_1745 at 1759.911 kb on + strand, within EX28DRAFT_1745 at 1760.022 kb on + strand, within EX28DRAFT_1745 at 1760.023 kb on - strand, within EX28DRAFT_1745 at 1760.088 kb on + strand, within EX28DRAFT_1745 at 1760.114 kb on + strand, within EX28DRAFT_1745 at 1760.225 kb on + strand, within EX28DRAFT_1745 at 1760.225 kb on + strand, within EX28DRAFT_1745 at 1760.235 kb on + strand, within EX28DRAFT_1745 at 1760.236 kb on - strand, within EX28DRAFT_1745 at 1760.403 kb on + strand, within EX28DRAFT_1745 at 1760.533 kb on + strand at 1760.545 kb on + strand at 1760.577 kb on + strand at 1760.578 kb on - strand at 1760.578 kb on - strand at 1760.619 kb on + strand at 1760.619 kb on + strand at 1760.620 kb on - strand at 1760.651 kb on + strand, within EX28DRAFT_1746 at 1760.822 kb on + strand, within EX28DRAFT_1746 at 1761.120 kb on - strand at 1761.461 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,758,701 + +0.3 1,759,715 - -1.0 1,759,724 + +0.4 1,759,725 - -0.2 1,759,725 - +0.3 1,759,778 + -0.3 1,759,778 + -0.2 1,759,779 - -0.1 1,759,839 - EX28DRAFT_1745 0.15 -0.4 1,759,874 + EX28DRAFT_1745 0.19 -0.0 1,759,875 - EX28DRAFT_1745 0.19 +0.2 1,759,911 + EX28DRAFT_1745 0.23 -0.2 1,760,022 + EX28DRAFT_1745 0.36 -0.5 1,760,023 - EX28DRAFT_1745 0.36 -0.6 1,760,088 + EX28DRAFT_1745 0.43 +0.3 1,760,114 + EX28DRAFT_1745 0.46 +0.5 1,760,225 + EX28DRAFT_1745 0.58 +1.4 1,760,225 + EX28DRAFT_1745 0.58 +1.6 1,760,235 + EX28DRAFT_1745 0.59 +0.3 1,760,236 - EX28DRAFT_1745 0.59 +0.3 1,760,403 + EX28DRAFT_1745 0.78 +1.7 1,760,533 + -0.5 1,760,545 + -0.2 1,760,577 + -0.1 1,760,578 - +2.2 1,760,578 - -1.1 1,760,619 + -0.1 1,760,619 + +0.0 1,760,620 - +1.5 1,760,651 + EX28DRAFT_1746 0.12 -0.3 1,760,822 + EX28DRAFT_1746 0.43 -0.4 1,761,120 - +0.2 1,761,461 + -0.3
Or see this region's nucleotide sequence