Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0569 and EX28DRAFT_0570 are separated by 141 nucleotides EX28DRAFT_0570 and EX28DRAFT_0571 are separated by 54 nucleotides EX28DRAFT_0571 and EX28DRAFT_0572 are separated by 164 nucleotides
EX28DRAFT_0569: EX28DRAFT_0569 - Transcriptional regulator, at 565,920 to 566,840
_0569
EX28DRAFT_0570: EX28DRAFT_0570 - Putative translation initiation inhibitor, yjgF family, at 566,982 to 567,383
_0570
EX28DRAFT_0571: EX28DRAFT_0571 - tRNA, at 567,438 to 567,513
_0571
EX28DRAFT_0572: EX28DRAFT_0572 - TonB-dependent siderophore receptor, at 567,678 to 569,867
_0572
Position (kb) 566
567
568 Strain fitness (log2 ratio) -1
0
1
2
3 at 566.027 kb on - strand, within EX28DRAFT_0569 at 566.062 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.183 kb on - strand, within EX28DRAFT_0569 at 566.202 kb on - strand, within EX28DRAFT_0569 at 566.268 kb on + strand, within EX28DRAFT_0569 at 566.330 kb on - strand, within EX28DRAFT_0569 at 566.553 kb on + strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.644 kb on + strand, within EX28DRAFT_0569 at 566.645 kb on - strand, within EX28DRAFT_0569 at 566.732 kb on + strand, within EX28DRAFT_0569 at 566.759 kb on + strand at 566.759 kb on + strand at 566.759 kb on + strand at 566.760 kb on - strand at 566.760 kb on - strand at 566.876 kb on + strand at 566.939 kb on + strand at 566.939 kb on + strand at 566.940 kb on - strand at 566.975 kb on + strand at 567.027 kb on + strand, within EX28DRAFT_0570 at 567.173 kb on + strand, within EX28DRAFT_0570 at 567.202 kb on + strand, within EX28DRAFT_0570 at 567.202 kb on + strand, within EX28DRAFT_0570 at 567.203 kb on - strand, within EX28DRAFT_0570 at 567.252 kb on - strand, within EX28DRAFT_0570 at 567.292 kb on - strand, within EX28DRAFT_0570 at 567.327 kb on + strand, within EX28DRAFT_0570 at 567.639 kb on + strand at 567.695 kb on - strand at 567.727 kb on + strand at 567.727 kb on + strand at 567.728 kb on - strand at 567.732 kb on - strand at 567.800 kb on - strand at 567.881 kb on + strand at 568.102 kb on + strand, within EX28DRAFT_0572 at 568.208 kb on - strand, within EX28DRAFT_0572 at 568.346 kb on - strand, within EX28DRAFT_0572
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 566,027 - EX28DRAFT_0569 0.12 -0.8 566,062 - EX28DRAFT_0569 0.15 +0.2 566,105 - EX28DRAFT_0569 0.20 -0.3 566,105 - EX28DRAFT_0569 0.20 -0.8 566,105 - EX28DRAFT_0569 0.20 +3.0 566,105 - EX28DRAFT_0569 0.20 +0.7 566,182 + EX28DRAFT_0569 0.28 -0.1 566,182 + EX28DRAFT_0569 0.28 -0.3 566,182 + EX28DRAFT_0569 0.28 +0.1 566,183 - EX28DRAFT_0569 0.29 -0.6 566,202 - EX28DRAFT_0569 0.31 -0.3 566,268 + EX28DRAFT_0569 0.38 +0.2 566,330 - EX28DRAFT_0569 0.45 -1.2 566,553 + EX28DRAFT_0569 0.69 +0.1 566,554 - EX28DRAFT_0569 0.69 -0.2 566,554 - EX28DRAFT_0569 0.69 +0.2 566,554 - EX28DRAFT_0569 0.69 +0.7 566,644 + EX28DRAFT_0569 0.79 +0.2 566,645 - EX28DRAFT_0569 0.79 -0.1 566,732 + EX28DRAFT_0569 0.88 +0.1 566,759 + +0.4 566,759 + -0.0 566,759 + -0.2 566,760 - +0.4 566,760 - +0.6 566,876 + -0.6 566,939 + +0.1 566,939 + -1.0 566,940 - +0.1 566,975 + -0.5 567,027 + EX28DRAFT_0570 0.11 +0.6 567,173 + EX28DRAFT_0570 0.48 +0.2 567,202 + EX28DRAFT_0570 0.55 +0.2 567,202 + EX28DRAFT_0570 0.55 -0.4 567,203 - EX28DRAFT_0570 0.55 +0.6 567,252 - EX28DRAFT_0570 0.67 -0.6 567,292 - EX28DRAFT_0570 0.77 +0.0 567,327 + EX28DRAFT_0570 0.86 +0.9 567,639 + +0.1 567,695 - +0.3 567,727 + +0.2 567,727 + -0.7 567,728 - +0.2 567,732 - -0.3 567,800 - -0.3 567,881 + +0.3 568,102 + EX28DRAFT_0572 0.19 -0.3 568,208 - EX28DRAFT_0572 0.24 -0.2 568,346 - EX28DRAFT_0572 0.31 -1.0
Or see this region's nucleotide sequence