Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0137 and EX28DRAFT_0138 are separated by 58 nucleotides EX28DRAFT_0138 and EX28DRAFT_0139 are separated by 159 nucleotides
EX28DRAFT_0137: EX28DRAFT_0137 - Thermolysin metallopeptidase, alpha-helical domain/Thermolysin metallopeptidase, catalytic domain, at 80,460 to 81,479
_0137
EX28DRAFT_0138: EX28DRAFT_0138 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 81,538 to 82,911
_0138
EX28DRAFT_0139: EX28DRAFT_0139 - inosine-5'-monophosphate dehydrogenase, at 83,071 to 84,537
_0139
Position (kb) 81
82
83 Strain fitness (log2 ratio) -1
0
1
2 at 80.605 kb on + strand, within EX28DRAFT_0137 at 80.662 kb on + strand, within EX28DRAFT_0137 at 80.890 kb on + strand, within EX28DRAFT_0137 at 80.891 kb on - strand, within EX28DRAFT_0137 at 80.956 kb on + strand, within EX28DRAFT_0137 at 81.040 kb on - strand, within EX28DRAFT_0137 at 81.109 kb on + strand, within EX28DRAFT_0137 at 81.141 kb on - strand, within EX28DRAFT_0137 at 81.141 kb on - strand, within EX28DRAFT_0137 at 81.191 kb on + strand, within EX28DRAFT_0137 at 81.192 kb on - strand, within EX28DRAFT_0137 at 81.196 kb on - strand, within EX28DRAFT_0137 at 81.199 kb on + strand, within EX28DRAFT_0137 at 81.200 kb on - strand, within EX28DRAFT_0137 at 81.200 kb on - strand, within EX28DRAFT_0137 at 81.200 kb on - strand, within EX28DRAFT_0137 at 81.205 kb on + strand, within EX28DRAFT_0137 at 81.206 kb on - strand, within EX28DRAFT_0137 at 81.206 kb on - strand, within EX28DRAFT_0137 at 81.385 kb on - strand at 81.446 kb on + strand at 81.446 kb on + strand at 81.447 kb on - strand at 81.448 kb on + strand at 81.448 kb on + strand at 81.449 kb on - strand at 81.506 kb on + strand at 81.515 kb on + strand at 81.515 kb on + strand at 81.516 kb on - strand at 81.516 kb on - strand at 81.516 kb on - strand at 81.516 kb on - strand at 81.517 kb on + strand at 81.517 kb on + strand at 81.517 kb on + strand at 81.517 kb on + strand at 81.517 kb on + strand at 81.517 kb on + strand at 81.518 kb on - strand at 81.518 kb on - strand at 81.518 kb on - strand at 81.518 kb on - strand at 81.520 kb on + strand at 81.520 kb on + strand at 81.520 kb on + strand at 81.521 kb on - strand at 81.521 kb on - strand at 81.524 kb on + strand at 81.643 kb on + strand at 81.644 kb on - strand at 81.693 kb on + strand, within EX28DRAFT_0138 at 81.694 kb on - strand, within EX28DRAFT_0138 at 81.910 kb on - strand, within EX28DRAFT_0138 at 81.910 kb on - strand, within EX28DRAFT_0138 at 82.052 kb on + strand, within EX28DRAFT_0138 at 82.053 kb on - strand, within EX28DRAFT_0138 at 82.310 kb on - strand, within EX28DRAFT_0138 at 82.312 kb on + strand, within EX28DRAFT_0138 at 82.312 kb on + strand, within EX28DRAFT_0138 at 82.313 kb on - strand, within EX28DRAFT_0138 at 82.357 kb on + strand, within EX28DRAFT_0138 at 82.358 kb on - strand, within EX28DRAFT_0138 at 82.358 kb on - strand, within EX28DRAFT_0138 at 82.358 kb on - strand, within EX28DRAFT_0138 at 82.521 kb on - strand, within EX28DRAFT_0138 at 82.572 kb on - strand, within EX28DRAFT_0138 at 82.646 kb on + strand, within EX28DRAFT_0138 at 82.646 kb on + strand, within EX28DRAFT_0138 at 82.646 kb on + strand, within EX28DRAFT_0138 at 82.770 kb on - strand, within EX28DRAFT_0138 at 82.943 kb on + strand at 82.944 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 80,605 + EX28DRAFT_0137 0.14 -0.2 80,662 + EX28DRAFT_0137 0.20 -1.1 80,890 + EX28DRAFT_0137 0.42 -0.8 80,891 - EX28DRAFT_0137 0.42 +0.3 80,956 + EX28DRAFT_0137 0.49 -0.2 81,040 - EX28DRAFT_0137 0.57 +0.6 81,109 + EX28DRAFT_0137 0.64 -0.5 81,141 - EX28DRAFT_0137 0.67 -0.3 81,141 - EX28DRAFT_0137 0.67 +1.4 81,191 + EX28DRAFT_0137 0.72 +1.2 81,192 - EX28DRAFT_0137 0.72 +1.2 81,196 - EX28DRAFT_0137 0.72 -0.3 81,199 + EX28DRAFT_0137 0.72 -0.1 81,200 - EX28DRAFT_0137 0.73 +0.3 81,200 - EX28DRAFT_0137 0.73 -0.6 81,200 - EX28DRAFT_0137 0.73 +0.4 81,205 + EX28DRAFT_0137 0.73 +0.9 81,206 - EX28DRAFT_0137 0.73 -1.3 81,206 - EX28DRAFT_0137 0.73 -0.3 81,385 - +0.4 81,446 + +0.2 81,446 + +2.0 81,447 - +0.1 81,448 + -1.1 81,448 + +0.7 81,449 - -1.3 81,506 + +0.6 81,515 + -0.3 81,515 + -0.5 81,516 - +0.4 81,516 - +0.3 81,516 - +0.7 81,516 - -1.0 81,517 + -0.4 81,517 + -0.5 81,517 + -0.1 81,517 + +0.1 81,517 + +0.6 81,517 + -1.0 81,518 - -0.5 81,518 - -0.0 81,518 - -0.2 81,518 - -1.6 81,520 + +0.0 81,520 + +0.1 81,520 + -0.5 81,521 - -0.0 81,521 - +0.3 81,524 + +0.2 81,643 + -0.6 81,644 - -0.5 81,693 + EX28DRAFT_0138 0.11 -0.2 81,694 - EX28DRAFT_0138 0.11 +0.3 81,910 - EX28DRAFT_0138 0.27 +0.2 81,910 - EX28DRAFT_0138 0.27 -0.2 82,052 + EX28DRAFT_0138 0.37 -1.1 82,053 - EX28DRAFT_0138 0.37 +0.4 82,310 - EX28DRAFT_0138 0.56 -0.8 82,312 + EX28DRAFT_0138 0.56 -0.6 82,312 + EX28DRAFT_0138 0.56 -0.0 82,313 - EX28DRAFT_0138 0.56 -0.5 82,357 + EX28DRAFT_0138 0.60 -0.0 82,358 - EX28DRAFT_0138 0.60 -0.2 82,358 - EX28DRAFT_0138 0.60 +0.0 82,358 - EX28DRAFT_0138 0.60 -1.1 82,521 - EX28DRAFT_0138 0.72 -0.4 82,572 - EX28DRAFT_0138 0.75 -1.5 82,646 + EX28DRAFT_0138 0.81 -0.5 82,646 + EX28DRAFT_0138 0.81 -0.3 82,646 + EX28DRAFT_0138 0.81 +0.3 82,770 - EX28DRAFT_0138 0.90 +0.7 82,943 + -0.3 82,944 - -0.6
Or see this region's nucleotide sequence