Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20770

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
12,876	-		CA264_20760	0.79	+0.4
12,931	-		CA264_20760	0.86	-1.2
12,931	-		CA264_20760	0.86	+0.3
12,953	+		CA264_20760	0.89	+0.1
12,954	-		CA264_20760	0.89	+0.4
12,954	-		CA264_20760	0.89	-2.3
12,956	+		CA264_20760	0.89	-0.1
12,957	-		CA264_20760	0.89	+1.1
12,957	-		CA264_20760	0.89	-0.8
12,972	-				-0.2
12,972	-				-0.6
12,975	-				-0.2
12,978	+				+0.2
13,012	-				-0.4
13,012	-				-0.1
13,012	-				+0.3
13,012	-				-0.2
13,016	+				-0.8
13,111	+		CA264_20765	0.11	+0.4
13,119	+		CA264_20765	0.12	-0.5
13,170	+		CA264_20765	0.19	+0.3
13,202	+		CA264_20765	0.23	+0.4
13,203	-		CA264_20765	0.23	+0.6
13,264	+		CA264_20765	0.31	-0.7
13,267	+		CA264_20765	0.31	+0.1
13,267	+		CA264_20765	0.31	+0.0
13,267	+		CA264_20765	0.31	-1.1
13,268	-		CA264_20765	0.31	+0.6
13,302	+		CA264_20765	0.36	-0.2
13,302	+		CA264_20765	0.36	-0.4
13,303	-		CA264_20765	0.36	+0.5
13,354	-		CA264_20765	0.43	+0.1
13,354	-		CA264_20765	0.43	-0.5
13,354	-		CA264_20765	0.43	-0.1
13,411	-		CA264_20765	0.50	-0.5
13,422	+		CA264_20765	0.52	-0.6
13,423	-		CA264_20765	0.52	+0.1
13,446	-		CA264_20765	0.55	-0.5
13,450	+		CA264_20765	0.55	-0.6
13,523	+		CA264_20765	0.65	+0.6
13,523	+		CA264_20765	0.65	-0.4
13,524	-		CA264_20765	0.65	+0.3
13,524	-		CA264_20765	0.65	-1.1
13,524	-		CA264_20765	0.65	-1.6
13,524	-		CA264_20765	0.65	+0.1
13,524	-		CA264_20765	0.65	+0.3
13,524	-		CA264_20765	0.65	-0.7
13,525	+		CA264_20765	0.65	+0.4
13,526	-		CA264_20765	0.65	-0.7
13,543	+		CA264_20765	0.68	-0.7
13,545	+		CA264_20765	0.68	-0.2
13,545	+		CA264_20765	0.68	-0.4
13,546	-		CA264_20765	0.68	-0.1
13,546	-		CA264_20765	0.68	+0.6
13,546	-		CA264_20765	0.68	-1.1
13,560	-		CA264_20765	0.70	-0.2
13,742	-				-0.6
13,768	+				-0.1
13,790	-				+0.3
13,790	-				-0.1
13,883	+				+0.1
13,884	-				+0.3
13,884	-				-0.3
13,896	-				-0.6
13,896	-				+1.4
13,896	-				+0.8
13,928	-				-0.1
13,953	+				-0.2
13,954	-				-1.3
13,960	+				+0.7
13,961	-				-0.3
13,964	+				+0.7
13,964	+				-0.1
13,965	-				-1.5
14,010	-		CA264_20770	0.11	+0.1
14,041	+		CA264_20770	0.13	+0.8
14,271	-		CA264_20770	0.24	-0.8
14,273	+		CA264_20770	0.24	-1.4
14,274	-		CA264_20770	0.24	-0.0
14,274	-		CA264_20770	0.24	+0.4
14,400	+		CA264_20770	0.31	+0.3
14,401	-		CA264_20770	0.31	-0.1
14,401	-		CA264_20770	0.31	+0.3
14,405	+		CA264_20770	0.31	+0.6
14,405	+		CA264_20770	0.31	-0.0
14,425	+		CA264_20770	0.32	-0.5
14,441	-		CA264_20770	0.33	-0.2
14,447	-		CA264_20770	0.33	+0.9
14,447	-		CA264_20770	0.33	-0.3
14,612	+		CA264_20770	0.42	+0.7
14,614	+		CA264_20770	0.42	-0.1
14,615	-		CA264_20770	0.42	+1.0
14,634	+		CA264_20770	0.43	-0.3
14,683	-		CA264_20770	0.45	+0.0
14,713	+		CA264_20770	0.47	+0.6
14,714	-		CA264_20770	0.47	-0.6
14,715	+		CA264_20770	0.47	-0.3
14,716	-		CA264_20770	0.47	+0.9
14,725	+		CA264_20770	0.47	-0.2
14,759	-		CA264_20770	0.49	-0.3
14,827	+		CA264_20770	0.53	+0.1
14,913	-		CA264_20770	0.57	-0.2
14,927	-		CA264_20770	0.58	+0.2
15,096	+		CA264_20770	0.66	+0.1
15,097	-		CA264_20770	0.66	+0.2
15,097	-		CA264_20770	0.66	-1.2
15,097	-		CA264_20770	0.66	-0.5
15,142	+		CA264_20770	0.69	-0.2
15,143	-		CA264_20770	0.69	-0.7
15,148	-		CA264_20770	0.69	+0.3
15,188	+		CA264_20770	0.71	-0.2
15,188	+		CA264_20770	0.71	+0.7
15,189	-		CA264_20770	0.71	-0.1
15,199	-		CA264_20770	0.72	-0.1
15,205	+		CA264_20770	0.72	-0.1
15,239	+		CA264_20770	0.74	-0.3
15,352	-		CA264_20770	0.79	-0.2
15,432	-		CA264_20770	0.83	-1.0
15,441	-		CA264_20770	0.84	+0.1
15,492	+		CA264_20770	0.86	-0.1
15,514	+		CA264_20770	0.88	-0.8
15,659	-				+0.2
15,708	-				-0.0
15,737	+				-2.5
15,822	+				+0.1
15,829	-				-1.4
15,852	+				-0.6
15,852	+				-0.6
15,853	-				-1.0
15,853	-				+0.4
15,856	+				-0.1
15,889	+				-0.3
15,890	-				+1.4
15,905	-				+0.1
15,916	+		CA264_20775	0.11	-0.6
15,917	-		CA264_20775	0.11	-0.2
15,917	-		CA264_20775	0.11	-0.1
15,928	+		CA264_20775	0.13	-0.1
15,983	-		CA264_20775	0.22	+0.3
16,066	+		CA264_20775	0.36	+0.7
16,066	+		CA264_20775	0.36	+0.2
16,067	-		CA264_20775	0.36	+0.7
16,087	+		CA264_20775	0.39	+0.7
16,088	-		CA264_20775	0.40	+0.4
16,088	-		CA264_20775	0.40	-0.4
16,088	-		CA264_20775	0.40	-1.3
16,144	+		CA264_20775	0.49	+0.3
16,144	+		CA264_20775	0.49	-0.6
16,145	-		CA264_20775	0.49	-1.3
16,145	-		CA264_20775	0.49	-0.8
16,207	+		CA264_20775	0.59	-0.6
16,207	+		CA264_20775	0.59	+0.3
16,208	-		CA264_20775	0.59	-0.3
16,312	+		CA264_20775	0.77	-0.5
16,312	+		CA264_20775	0.77	+0.9
16,312	+		CA264_20775	0.77	-2.0
16,313	-		CA264_20775	0.77	+0.5
16,313	-		CA264_20775	0.77	-0.3
16,365	-		CA264_20775	0.86	+0.2
16,367	-		CA264_20775	0.86	-0.9
16,396	+				-0.4
16,397	-				-0.5
16,430	+				-0.3
16,431	-				+0.1
16,453	+				+0.4
16,453	+				-0.2
16,462	+				+0.4
16,525	+				-1.3
16,526	-				-0.1
16,526	-				-0.6
16,548	+				+0.4
16,549	-				-0.3
16,552	+				+0.1
16,553	-				-0.6
16,553	-				+0.3
16,553	-				-0.9
16,557	-				-0.0
16,592	+				+1.7
16,641	-				-0.9
16,670	+				+0.6
16,670	+				-0.1
16,670	+				-0.7
16,686	+				-0.1
16,686	+				+0.2
16,697	+				-0.6
16,698	-				+0.4
16,734	+				-0.5
16,734	+				-0.8
16,735	-				-0.4
16,735	-				-0.6
16,735	-				-0.7
16,735	-				-0.3
16,741	-				-0.3
16,745	+				-1.3