Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10230

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,373,940	+		CA264_10225	0.22	-0.1
2,373,941	-		CA264_10225	0.22	+0.3
2,374,001	-		CA264_10225	0.28	+0.5
2,374,004	-		CA264_10225	0.28	-0.2
2,374,051	-		CA264_10225	0.33	-0.0
2,374,094	+		CA264_10225	0.37	-0.7
2,374,096	+		CA264_10225	0.37	-0.1
2,374,097	-		CA264_10225	0.37	+0.1
2,374,097	-		CA264_10225	0.37	-1.2
2,374,097	-		CA264_10225	0.37	-0.2
2,374,106	+		CA264_10225	0.38	-0.5
2,374,107	-		CA264_10225	0.38	+0.0
2,374,112	-		CA264_10225	0.39	-1.4
2,374,120	+		CA264_10225	0.39	-0.8
2,374,135	+		CA264_10225	0.41	-1.6
2,374,177	+		CA264_10225	0.45	-1.3
2,374,178	-		CA264_10225	0.45	+1.0
2,374,178	-		CA264_10225	0.45	+0.2
2,374,190	+		CA264_10225	0.46	-0.3
2,374,190	+		CA264_10225	0.46	-0.3
2,374,191	-		CA264_10225	0.46	-1.6
2,374,191	-		CA264_10225	0.46	-0.5
2,374,191	-		CA264_10225	0.46	-0.1
2,374,191	-		CA264_10225	0.46	-0.8
2,374,195	+		CA264_10225	0.46	+0.2
2,374,195	+		CA264_10225	0.46	+0.1
2,374,195	+		CA264_10225	0.46	+0.1
2,374,196	-		CA264_10225	0.47	+2.2
2,374,197	+		CA264_10225	0.47	+1.5
2,374,197	+		CA264_10225	0.47	-0.0
2,374,198	-		CA264_10225	0.47	+1.1
2,374,212	-		CA264_10225	0.48	+1.1
2,374,221	+		CA264_10225	0.49	+0.1
2,374,221	+		CA264_10225	0.49	-0.6
2,374,221	+		CA264_10225	0.49	+0.8
2,374,221	+		CA264_10225	0.49	-0.2
2,374,221	+		CA264_10225	0.49	+0.1
2,374,222	-		CA264_10225	0.49	-1.0
2,374,223	+		CA264_10225	0.49	-0.5
2,374,228	+		CA264_10225	0.50	+0.9
2,374,229	-		CA264_10225	0.50	-1.6
2,374,283	+		CA264_10225	0.55	+0.8
2,374,284	-		CA264_10225	0.55	-0.5
2,374,284	-		CA264_10225	0.55	-0.0
2,374,312	+		CA264_10225	0.58	-1.2
2,374,312	+		CA264_10225	0.58	+0.3
2,374,330	+		CA264_10225	0.59	-1.4
2,374,331	-		CA264_10225	0.59	+0.7
2,374,338	+		CA264_10225	0.60	-0.3
2,374,342	+		CA264_10225	0.60	+0.1
2,374,342	+		CA264_10225	0.60	-0.1
2,374,360	+		CA264_10225	0.62	+0.1
2,374,361	-		CA264_10225	0.62	+0.3
2,374,420	+		CA264_10225	0.68	+0.2
2,374,451	+		CA264_10225	0.71	-0.4
2,374,482	-		CA264_10225	0.74	+0.4
2,374,482	-		CA264_10225	0.74	-0.2
2,374,482	-		CA264_10225	0.74	-0.2
2,374,501	+		CA264_10225	0.76	-0.7
2,374,501	+		CA264_10225	0.76	+0.7
2,374,587	+		CA264_10225	0.84	-2.5
2,374,592	+		CA264_10225	0.84	-0.5
2,374,593	-		CA264_10225	0.84	+0.4
2,374,595	+		CA264_10225	0.85	-0.6
2,374,607	-		CA264_10225	0.86	-0.1
2,374,647	+		CA264_10225	0.90	+0.6
2,374,647	+		CA264_10225	0.90	-0.9
2,374,647	+		CA264_10225	0.90	+0.2
2,374,647	+		CA264_10225	0.90	-0.4
2,374,648	-		CA264_10225	0.90	-0.1
2,374,648	-		CA264_10225	0.90	+1.1
2,374,648	-		CA264_10225	0.90	-0.2
2,374,656	+				-0.1
2,374,657	-				+0.4
2,374,683	+				-1.7
2,374,688	+				-1.1
2,374,689	-				+0.3
2,374,722	+				-0.0
2,374,723	-				+0.7
2,374,723	-				-0.8
2,374,723	-				+0.5
2,374,723	-				-0.9
2,374,774	-				-0.1
2,374,774	-				-0.8
2,374,774	-				-0.1
2,374,775	+				+0.4
2,374,823	-				+0.0
2,374,846	+				-0.3
2,374,846	+				+0.0
2,374,846	+				-0.9
2,374,847	-				-0.7
2,374,847	-				-0.8
2,374,864	-				-0.0
2,374,864	-				-0.1
2,374,866	+				-0.1
2,374,867	-				-0.3
2,374,867	-				+0.2
2,374,869	+				+0.6
2,374,869	+				+0.5
2,374,870	-				-0.7
2,374,880	-				-1.1
2,374,908	+				-0.2
2,374,917	+				+1.3
2,374,920	-				+1.1
2,374,947	-				-0.1
2,375,072	-		CA264_10230	0.13	+0.2
2,375,072	-		CA264_10230	0.13	+0.1
2,375,152	+		CA264_10230	0.21	-0.3
2,375,152	+		CA264_10230	0.21	-0.4
2,375,152	+		CA264_10230	0.21	-0.1
2,375,155	-		CA264_10230	0.21	-0.2
2,375,161	-		CA264_10230	0.22	-0.2
2,375,161	-		CA264_10230	0.22	+0.2
2,375,171	-		CA264_10230	0.23	+1.6
2,375,217	+		CA264_10230	0.27	+0.9
2,375,254	-		CA264_10230	0.31	-0.6
2,375,265	+		CA264_10230	0.32	+0.0
2,375,371	-		CA264_10230	0.42	-0.8
2,375,373	+		CA264_10230	0.43	-0.2
2,375,374	-		CA264_10230	0.43	-0.6
2,375,374	-		CA264_10230	0.43	-0.4
2,375,374	-		CA264_10230	0.43	+0.1
2,375,414	+		CA264_10230	0.47	+0.3
2,375,415	-		CA264_10230	0.47	+0.3
2,375,507	+		CA264_10230	0.56	+0.1
2,375,511	+		CA264_10230	0.56	+0.3
2,375,532	+		CA264_10230	0.58	-0.2
2,375,560	-		CA264_10230	0.61	-0.2
2,375,609	+		CA264_10230	0.66	+1.0
2,375,614	+		CA264_10230	0.66	+0.2
2,375,621	-		CA264_10230	0.67	-0.1
2,375,664	+		CA264_10230	0.71	+0.1
2,375,665	-		CA264_10230	0.71	-0.3
2,375,665	-		CA264_10230	0.71	+0.5
2,375,678	-		CA264_10230	0.73	+0.6
2,375,678	-		CA264_10230	0.73	+0.6
2,375,686	+		CA264_10230	0.73	-0.1
2,375,718	+		CA264_10230	0.76	+0.0
2,375,719	-		CA264_10230	0.77	-1.3
2,375,719	-		CA264_10230	0.77	+1.4
2,375,754	-		CA264_10230	0.80	-0.8
2,375,935	+				+0.2
2,375,935	+				+1.2
2,375,960	+				+0.1
2,375,982	-				+1.2
2,376,000	+				-1.7
2,376,000	+				-0.6
2,376,000	+				-0.2
2,376,000	+				-0.2
2,376,001	-				+0.7
2,376,001	-				+1.7
2,376,022	+				+0.2
2,376,022	+				+0.0
2,376,022	+				+2.1
2,376,022	+				-0.1
2,376,022	+				+0.0
2,376,023	-				+0.0
2,376,023	-				-0.0
2,376,057	+				-0.9
2,376,057	+				-0.3
2,376,057	+				+0.4
2,376,063	+				-1.6
2,376,064	-				+1.2
2,376,064	-				+0.4
2,376,066	-				+0.5
2,376,102	-				-0.2
2,376,122	+				+0.1
2,376,123	-				+0.3
2,376,153	-				-0.2
2,376,157	+				+0.6
2,376,157	+				+0.3
2,376,262	+				+0.3
2,376,263	-				-0.5
2,376,325	-				+2.2
2,376,330	-				+1.2
2,376,344	+				-0.4
2,376,345	-				-0.1
2,376,461	-				-1.4
2,376,461	-				+1.2
2,376,471	-		CA264_10235	0.10	+1.9
2,376,495	+		CA264_10235	0.11	-0.0
2,376,502	+		CA264_10235	0.11	-0.1
2,376,549	-		CA264_10235	0.13	-0.5
2,376,580	+		CA264_10235	0.14	+0.5
2,376,581	-		CA264_10235	0.14	-0.9
2,376,605	-		CA264_10235	0.14	-0.6
2,376,636	-		CA264_10235	0.15	-0.1
2,376,636	-		CA264_10235	0.15	-0.1
2,376,638	-		CA264_10235	0.15	+1.4
2,376,644	+		CA264_10235	0.16	-0.8
2,376,764	-		CA264_10235	0.19	-0.2
2,376,861	+		CA264_10235	0.22	-0.2
2,376,862	-		CA264_10235	0.22	-0.6
2,376,873	-		CA264_10235	0.23	-0.0
2,376,888	+		CA264_10235	0.23	-0.2
2,376,888	+		CA264_10235	0.23	+1.0