Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2912

Experiment: KB with Nitrofurantoin 31.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 31.25 ug/ml
3,494,325	+		Psyr_2911	0.74	+0.3
3,494,385	+		Psyr_2911	0.78	-0.5
3,494,385	+		Psyr_2911	0.78	+1.3
3,494,386	-		Psyr_2911	0.78	+1.4
3,494,386	-		Psyr_2911	0.78	+0.1
3,494,386	-		Psyr_2911	0.78	+0.9
3,494,402	-		Psyr_2911	0.79	-0.7
3,494,461	+		Psyr_2911	0.83	-0.7
3,494,461	+		Psyr_2911	0.83	-1.3
3,494,483	-		Psyr_2911	0.85	-0.0
3,494,517	+		Psyr_2911	0.87	-0.1
3,494,682	+				+1.1
3,494,682	+				+0.1
3,494,682	+				-2.4
3,494,682	+				+1.3
3,494,683	-				+0.3
3,494,683	-				-1.6
3,494,683	-				-0.9
3,494,683	-				+1.3
3,494,683	-				-1.3
3,494,683	-				+0.4
3,494,683	-				-0.6
3,494,704	+				-0.8
3,494,704	+				+0.5
3,494,705	-				+1.7
3,494,790	+				+0.3
3,494,792	+				+0.7
3,494,793	-				+0.3
3,494,843	-				-1.1
3,495,044	+				-0.7
3,495,071	+				+0.0
3,495,075	+				-0.3
3,495,076	-				+1.0
3,495,077	+				-0.8
3,495,104	+				+0.1
3,495,104	+				-1.4
3,495,214	+				+0.1
3,495,602	-		Psyr_2912	0.29	+1.7
3,495,704	-		Psyr_2912	0.39	-1.9
3,495,920	-		Psyr_2912	0.60	-0.9
3,496,404	-				-1.0
3,496,407	-				+0.1
3,496,585	+				-1.3
3,496,586	-				-0.6
3,496,588	+				+0.5
3,496,631	+				-0.3
3,496,631	+				-0.2
3,496,632	-				-3.7
3,497,050	+		Psyr_2913	0.45	-2.7
3,497,050	+		Psyr_2913	0.45	-2.7
3,497,050	+		Psyr_2913	0.45	-0.9
3,497,050	+		Psyr_2913	0.45	-1.4
3,497,050	+		Psyr_2913	0.45	-3.5
3,497,050	+		Psyr_2913	0.45	-2.1
3,497,051	-		Psyr_2913	0.45	-2.1
3,497,051	-		Psyr_2913	0.45	-3.0
3,497,051	-		Psyr_2913	0.45	-1.3
3,497,051	-		Psyr_2913	0.45	-1.3
3,497,051	-		Psyr_2913	0.45	-1.3
3,497,051	-		Psyr_2913	0.45	-0.9
3,497,051	-		Psyr_2913	0.45	-3.2
3,497,051	-		Psyr_2913	0.45	-1.1
3,497,051	-		Psyr_2913	0.45	-0.9
3,497,051	-		Psyr_2913	0.45	-3.5
3,497,105	-		Psyr_2913	0.51	-1.4
3,497,105	-		Psyr_2913	0.51	-2.2