Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1788

Experiment: KB with Nitrofurantoin 31.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 31.25 ug/ml
2,038,539	+		Psyr_1787	0.49	+2.5
2,038,539	+		Psyr_1787	0.49	+0.3
2,038,562	+		Psyr_1787	0.51	-0.1
2,038,800	+		Psyr_1787	0.69	+1.1
2,038,806	+		Psyr_1787	0.70	-0.0
2,038,806	+		Psyr_1787	0.70	+0.2
2,038,806	+		Psyr_1787	0.70	+1.4
2,038,807	-		Psyr_1787	0.70	+0.5
2,038,807	-		Psyr_1787	0.70	-2.5
2,039,196	+				-0.5
2,039,197	-				+0.7
2,039,197	-				+0.9
2,039,197	-				+0.1
2,039,197	-				+1.3
2,039,197	-				-0.1
2,039,285	-				+0.1
2,039,399	+				+0.2
2,039,399	+				-0.6
2,039,399	+				+0.3
2,039,400	-				-1.2
2,039,400	-				-1.7
2,039,453	-				-0.0
2,039,453	-				+0.1
2,039,557	-				+1.4
2,039,557	-				+0.3
2,039,595	+				-0.7
2,039,746	+		Psyr_1788	0.18	+2.4
2,039,747	-		Psyr_1788	0.18	-0.0
2,039,963	+		Psyr_1788	0.36	+0.9
2,039,963	+		Psyr_1788	0.36	-1.0
2,039,963	+		Psyr_1788	0.36	+0.1
2,039,963	+		Psyr_1788	0.36	-0.1
2,039,963	+		Psyr_1788	0.36	-0.3
2,039,964	-		Psyr_1788	0.36	-0.8
2,040,206	+		Psyr_1788	0.56	-0.5
2,040,206	+		Psyr_1788	0.56	-0.7
2,040,206	+		Psyr_1788	0.56	-0.4
2,040,206	+		Psyr_1788	0.56	+0.1
2,040,206	+		Psyr_1788	0.56	-1.1
2,040,206	+		Psyr_1788	0.56	-2.3
2,040,206	+		Psyr_1788	0.56	+1.2
2,040,207	-		Psyr_1788	0.57	-0.3
2,040,207	-		Psyr_1788	0.57	-1.1
2,040,207	-		Psyr_1788	0.57	+0.4
2,040,207	-		Psyr_1788	0.57	+0.9
2,040,207	-		Psyr_1788	0.57	-0.1
2,040,228	-		Psyr_1788	0.58	+0.9
2,040,228	-		Psyr_1788	0.58	-0.1
2,040,233	+		Psyr_1788	0.59	-0.4
2,040,233	+		Psyr_1788	0.59	-0.8
2,040,233	+		Psyr_1788	0.59	+0.3
2,040,233	+		Psyr_1788	0.59	+0.4
2,040,234	-		Psyr_1788	0.59	+0.6
2,040,234	-		Psyr_1788	0.59	+0.5
2,040,234	-		Psyr_1788	0.59	-0.1
2,040,234	-		Psyr_1788	0.59	-0.3
2,040,265	+		Psyr_1788	0.61	-2.1
2,040,654	+				+1.3
2,040,654	+				-0.4
2,040,737	-				-1.8
2,041,403	+		Psyr_1789	0.37	-0.7
2,041,632	+		Psyr_1789	0.51	-0.5
2,041,632	+		Psyr_1789	0.51	-0.7
2,041,633	-		Psyr_1789	0.51	-0.9