Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29800

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
6,621,430	+				-0.7
6,621,430	+				-0.3
6,621,430	+				-0.2
6,621,430	+				+0.8
6,621,430	+				+1.1
6,621,430	+				+1.4
6,621,432	+				-3.0
6,621,432	+				-0.4
6,621,432	+				+0.1
6,621,432	+				-0.7
6,621,432	+				-0.9
6,621,432	+				+1.1
6,621,432	+				+0.4
6,621,432	+				+0.9
6,621,432	+				-0.1
6,621,432	+				-0.6
6,621,432	+				+1.0
6,621,432	+				-0.0
6,621,432	+				+0.8
6,621,432	+				+0.1
6,621,432	+				-0.8
6,621,432	+				+0.4
6,621,432	+				-0.1
6,621,432	+				+0.7
6,621,432	+				-0.1
6,621,432	+				-0.0
6,621,432	+				-0.1
6,621,432	+				+0.6
6,621,432	+				+0.4
6,621,432	+				-0.7
6,621,432	+				-0.9
6,621,432	+				-0.2
6,621,432	+				+1.2
6,621,432	+				+0.2
6,621,432	+				-0.9
6,621,432	+				+0.4
6,621,432	+				-1.9
6,621,432	+				-1.3
6,621,432	+				+0.6
6,621,432	+				-0.8
6,621,432	+				+0.5
6,621,432	+				-3.0
6,621,432	+				+0.5
6,621,432	+				-0.2
6,621,432	+				-0.4
6,621,433	-				-2.3
6,621,433	-				+0.3
6,621,433	-				+1.0
6,621,433	-				-2.7
6,621,433	-				+0.8
6,621,433	-				-0.6
6,621,433	-				-0.7
6,621,433	-				-2.5
6,621,433	-				+0.9
6,621,433	-				-1.2
6,621,433	-				+0.7
6,621,433	-				+0.1
6,621,433	-				+1.1
6,621,433	-				+0.9
6,621,433	-				-0.8
6,621,433	-				+0.8
6,621,433	-				-1.0
6,621,433	-				+0.4
6,621,433	-				+0.2
6,621,433	-				-1.0
6,621,433	-				-0.2
6,621,433	-				+0.4
6,621,433	-				-1.4
6,621,433	-				-0.3
6,621,433	-				-0.5
6,621,433	-				-0.4
6,621,433	-				+0.4
6,621,433	-				-0.3
6,621,433	-				+0.8
6,621,433	-				+0.7
6,621,433	-				-0.6
6,621,514	+		PFLU_RS29790	0.13	-0.9
6,621,561	+		PFLU_RS29790	0.22	-1.2
6,621,561	+		PFLU_RS29790	0.22	-0.6
6,621,561	+		PFLU_RS29790	0.22	+0.9
6,621,561	+		PFLU_RS29790	0.22	-0.7
6,621,561	+		PFLU_RS29790	0.22	+1.6
6,621,561	+		PFLU_RS29790	0.22	-0.5
6,621,561	+		PFLU_RS29790	0.22	-0.8
6,621,562	-		PFLU_RS29790	0.22	+0.3
6,621,562	-		PFLU_RS29790	0.22	-0.2
6,621,562	-		PFLU_RS29790	0.22	-0.2
6,621,562	-		PFLU_RS29790	0.22	+0.1
6,621,562	-		PFLU_RS29790	0.22	-0.1
6,621,562	-		PFLU_RS29790	0.22	+1.3
6,621,613	+		PFLU_RS29790	0.32	-1.2
6,621,613	+		PFLU_RS29790	0.32	-0.4
6,621,614	-		PFLU_RS29790	0.32	+0.4
6,621,652	-		PFLU_RS29790	0.39	-1.1
6,621,765	+		PFLU_RS29790	0.60	+0.4
6,621,765	+		PFLU_RS29790	0.60	-0.6
6,621,765	+		PFLU_RS29790	0.60	-0.1
6,621,765	+		PFLU_RS29790	0.60	-0.4
6,621,765	+		PFLU_RS29790	0.60	-2.1
6,621,765	+		PFLU_RS29790	0.60	+0.1
6,621,765	+		PFLU_RS29790	0.60	-0.2
6,621,765	+		PFLU_RS29790	0.60	-0.3
6,621,765	+		PFLU_RS29790	0.60	-1.8
6,621,765	+		PFLU_RS29790	0.60	-0.3
6,621,765	+		PFLU_RS29790	0.60	-1.5
6,621,766	-		PFLU_RS29790	0.60	-1.6
6,621,766	-		PFLU_RS29790	0.60	+0.1
6,621,766	-		PFLU_RS29790	0.60	-0.6
6,621,766	-		PFLU_RS29790	0.60	+0.8
6,621,766	-		PFLU_RS29790	0.60	+0.0
6,621,766	-		PFLU_RS29790	0.60	-0.7
6,621,766	-		PFLU_RS29790	0.60	-0.4
6,621,766	-		PFLU_RS29790	0.60	-0.5
6,621,947	+				-2.0
6,621,947	+				-1.3
6,621,947	+				+0.4
6,621,947	+				-0.6
6,621,947	+				-1.9
6,621,947	+				-0.5
6,621,947	+				-1.0
6,621,948	-				-0.4
6,621,948	-				-0.5
6,621,950	+				+0.6
6,621,950	+				-0.9
6,621,951	-				+0.3
6,621,951	-				-0.3
6,621,951	-				+0.5
6,621,951	-				-0.0
6,621,951	-				+0.5
6,621,951	-				-0.5
6,621,953	+				-0.7
6,621,953	+				-0.6
6,621,954	-				-0.3
6,621,954	-				+1.8
6,621,954	-				-0.3
6,621,954	-				+1.7
6,621,954	-				+0.1
6,621,954	-				-1.1
6,621,954	-				-1.3
6,621,954	-				-1.1
6,621,954	-				+0.6
6,621,954	-				-1.1
6,621,998	+				-0.9
6,621,999	-				+0.3
6,622,015	+				+0.3
6,622,016	-				+0.0
6,622,054	+				-1.0
6,622,081	-				-0.0
6,622,081	-				+1.0
6,622,081	-				-0.2
6,622,146	+		PFLU_RS29795	0.36	+0.3
6,622,146	+		PFLU_RS29795	0.36	-0.2
6,622,147	-		PFLU_RS29795	0.36	+0.3
6,622,147	-		PFLU_RS29795	0.36	+0.3
6,622,147	-		PFLU_RS29795	0.36	+0.1
6,622,170	+		PFLU_RS29795	0.46	-1.2
6,622,170	+		PFLU_RS29795	0.46	+1.1
6,622,170	+		PFLU_RS29795	0.46	+0.6
6,622,170	+		PFLU_RS29795	0.46	+0.4
6,622,170	+		PFLU_RS29795	0.46	+0.3
6,622,171	-		PFLU_RS29795	0.46	+0.5
6,622,171	-		PFLU_RS29795	0.46	+0.5
6,622,171	-		PFLU_RS29795	0.46	-1.1
6,622,330	+				+0.8
6,622,330	+				-1.4
6,622,330	+				+0.7
6,622,331	-				-0.4
6,622,331	-				-0.2
6,622,331	-				+0.8
6,622,331	-				-0.1
6,622,342	+				-0.8
6,622,410	+				-0.8
6,622,410	+				+0.1
6,622,410	+				-0.4
6,622,411	-				-0.6
6,622,411	-				-0.9
6,622,411	-				+0.6
6,623,515	-				-1.0
6,624,086	-				-0.1
6,624,118	+				+1.4
6,624,119	-				-0.6
6,624,119	-				-0.7
6,624,119	-				-0.2
6,624,119	-				-0.5
6,624,119	-				-0.2
6,624,120	+				-2.6
6,624,120	+				+0.5
6,624,121	-				+0.2
6,624,121	-				+1.4
6,624,125	+				-0.0
6,624,128	+				+0.5
6,624,128	+				-2.4
6,624,128	+				+0.5
6,624,128	+				-0.7
6,624,128	+				+0.1
6,624,129	-				-0.3
6,624,129	-				+1.1
6,624,129	-				-0.3
6,624,187	+				-0.7
6,624,195	+				-0.2
6,624,195	+				+0.9
6,624,195	+				+1.5
6,624,195	+				+0.5
6,624,195	+				-0.1
6,624,196	-				-0.4
6,624,196	-				+0.9
6,624,196	-				-1.9
6,624,196	-				+0.4
6,624,196	-				+1.7
6,624,255	+				+1.3
6,624,255	+				+1.8
6,624,255	+				+0.2
6,624,255	+				-0.4
6,624,255	+				-0.5
6,624,256	-				+0.8
6,624,256	-				+0.4
6,624,256	-				+0.5
6,624,267	-				-0.2
6,624,267	-				-0.6
6,624,267	-				-0.2
6,624,267	-				-2.5
6,624,267	-				+0.1
6,624,267	-				-0.3
6,624,267	-				-0.2
6,624,267	-				-0.2
6,624,267	-				+0.6
6,624,279	+				+0.5
6,624,279	+				+0.4
6,624,279	+				-0.4
6,624,279	+				+1.4
6,624,280	-				+0.3
6,624,280	-				-0.0
6,624,280	-				+0.4
6,624,377	+				+0.9
6,624,377	+				+1.9
6,624,377	+				-0.4
6,624,377	+				+2.2
6,624,377	+				+0.9
6,624,377	+				+1.2
6,624,377	+				+1.0
6,624,377	+				-1.4
6,624,377	+				+0.4
6,624,377	+				+1.3
6,624,377	+				-1.2
6,624,377	+				+0.4
6,624,377	+				+1.8
6,624,378	-				+0.8
6,624,378	-				+0.8
6,624,378	-				+1.0
6,624,378	-				+1.0
6,624,378	-				-0.2
6,624,378	-				+0.3
6,624,378	-				+0.4
6,624,378	-				+1.3
6,624,408	+				+0.9
6,624,408	+				+0.9
6,624,409	-				+1.9
6,624,409	-				+1.4