Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29515

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
6,551,351	+		PFLU_RS29510	0.81	+0.8
6,551,352	-		PFLU_RS29510	0.81	+2.4
6,551,771	+				-0.1
6,551,771	+				+0.0
6,551,771	+				+2.1
6,551,771	+				+0.3
6,551,771	+				-1.6
6,551,771	+				-1.7
6,551,771	+				+0.2
6,551,771	+				-0.7
6,551,771	+				+0.0
6,551,772	-				+0.5
6,551,772	-				-0.1
6,551,772	-				+0.5
6,551,772	-				-0.7
6,551,772	-				-1.2
6,551,772	-				-0.4
6,551,772	-				+0.5
6,551,772	-				-0.4
6,551,772	-				-0.0
6,551,772	-				-0.9
6,551,772	-				-0.7
6,551,772	-				-0.3
6,551,772	-				+1.3
6,551,774	+				-0.9
6,551,774	+				+0.4
6,551,774	+				+0.4
6,551,774	+				-0.2
6,551,774	+				+0.9
6,551,775	-				-0.4
6,551,775	-				-0.4
6,551,775	-				+0.6
6,551,775	-				+0.1
6,551,775	-				-1.6
6,551,775	-				+0.5
6,551,775	-				+0.1
6,551,775	-				+0.1
6,551,803	+				-1.7
6,551,840	+		PFLU_RS29515	0.13	-2.1
6,551,840	+		PFLU_RS29515	0.13	-1.9
6,551,840	+		PFLU_RS29515	0.13	-1.8
6,551,840	+		PFLU_RS29515	0.13	-2.1
6,551,840	+		PFLU_RS29515	0.13	-2.5
6,551,841	-		PFLU_RS29515	0.14	-2.5
6,551,841	-		PFLU_RS29515	0.14	-2.0
6,551,841	-		PFLU_RS29515	0.14	-2.0
6,551,841	-		PFLU_RS29515	0.14	-2.8
6,551,841	-		PFLU_RS29515	0.14	-2.5
6,551,873	+		PFLU_RS29515	0.22	-3.3
6,551,873	+		PFLU_RS29515	0.22	-1.6
6,551,873	+		PFLU_RS29515	0.22	-1.4
6,551,873	+		PFLU_RS29515	0.22	-1.7
6,551,873	+		PFLU_RS29515	0.22	+0.4
6,551,873	+		PFLU_RS29515	0.22	-3.2
6,551,873	+		PFLU_RS29515	0.22	-2.8
6,551,873	+		PFLU_RS29515	0.22	-1.8
6,551,873	+		PFLU_RS29515	0.22	-3.0
6,551,873	+		PFLU_RS29515	0.22	-2.1
6,551,873	+		PFLU_RS29515	0.22	-1.8
6,551,873	+		PFLU_RS29515	0.22	-2.3
6,551,874	-		PFLU_RS29515	0.22	-3.4
6,551,874	-		PFLU_RS29515	0.22	-2.0
6,551,874	-		PFLU_RS29515	0.22	-3.7
6,551,874	-		PFLU_RS29515	0.22	-2.4
6,551,874	-		PFLU_RS29515	0.22	-2.7
6,551,874	-		PFLU_RS29515	0.22	-3.9
6,551,874	-		PFLU_RS29515	0.22	+0.4
6,551,874	-		PFLU_RS29515	0.22	-1.6
6,551,874	-		PFLU_RS29515	0.22	-1.8
6,551,874	-		PFLU_RS29515	0.22	-3.6
6,551,874	-		PFLU_RS29515	0.22	-3.9
6,551,874	-		PFLU_RS29515	0.22	-1.9
6,551,874	-		PFLU_RS29515	0.22	-0.4
6,551,944	-		PFLU_RS29515	0.41	-1.2
6,551,944	-		PFLU_RS29515	0.41	-0.3
6,552,071	+		PFLU_RS29515	0.74	-1.5
6,552,072	-		PFLU_RS29515	0.74	-2.3
6,552,072	-		PFLU_RS29515	0.74	-1.4
6,552,072	-		PFLU_RS29515	0.74	-3.9
6,552,072	-		PFLU_RS29515	0.74	-2.1
6,552,167	+				+0.4
6,552,167	+				+0.1
6,552,242	+				-0.2
6,552,242	+				-0.8
6,552,242	+				+0.2
6,552,243	-				+0.6
6,552,243	-				-0.2
6,552,243	-				+0.4
6,552,243	-				-0.1
6,552,243	-				-0.4
6,552,243	-				+0.7
6,552,243	-				+0.1
6,552,243	-				+0.5
6,552,243	-				-0.5
6,552,243	-				-0.1
6,552,243	-				-1.5
6,552,270	+				+0.3
6,552,433	+		PFLU_RS29520	0.28	-1.7
6,552,434	-		PFLU_RS29520	0.28	+0.1
6,552,434	-		PFLU_RS29520	0.28	-1.5
6,552,436	+		PFLU_RS29520	0.28	-0.3
6,552,436	+		PFLU_RS29520	0.28	-0.2
6,552,436	+		PFLU_RS29520	0.28	-0.5
6,552,436	+		PFLU_RS29520	0.28	+0.1
6,552,436	+		PFLU_RS29520	0.28	+0.1
6,552,436	+		PFLU_RS29520	0.28	-0.2
6,552,436	+		PFLU_RS29520	0.28	+0.4
6,552,436	+		PFLU_RS29520	0.28	-1.5
6,552,437	-		PFLU_RS29520	0.28	+0.6
6,552,437	-		PFLU_RS29520	0.28	+0.4
6,552,437	-		PFLU_RS29520	0.28	-0.5
6,552,437	-		PFLU_RS29520	0.28	-2.3
6,552,437	-		PFLU_RS29520	0.28	-1.2
6,552,505	+		PFLU_RS29520	0.38	-1.9
6,552,505	+		PFLU_RS29520	0.38	+0.4
6,552,506	-		PFLU_RS29520	0.38	-0.2
6,552,506	-		PFLU_RS29520	0.38	+0.8
6,552,652	+		PFLU_RS29520	0.57	-0.1
6,552,652	+		PFLU_RS29520	0.57	+0.6
6,552,653	-		PFLU_RS29520	0.57	-0.6
6,552,653	-		PFLU_RS29520	0.57	-0.4
6,552,653	-		PFLU_RS29520	0.57	-2.0
6,552,662	-		PFLU_RS29520	0.59	-1.4
6,552,662	-		PFLU_RS29520	0.59	+0.2
6,552,662	-		PFLU_RS29520	0.59	-0.6
6,552,750	+		PFLU_RS29520	0.70	-0.6
6,552,750	+		PFLU_RS29520	0.70	-0.7
6,552,751	-		PFLU_RS29520	0.71	-0.3
6,552,751	-		PFLU_RS29520	0.71	+0.3
6,552,751	-		PFLU_RS29520	0.71	-0.4
6,552,764	-		PFLU_RS29520	0.72	-0.4
6,552,808	+		PFLU_RS29520	0.78	+0.5
6,552,809	-		PFLU_RS29520	0.78	+0.6
6,552,809	-		PFLU_RS29520	0.78	-1.2
6,552,920	+				+0.8
6,552,920	+				-0.2
6,552,921	-				+0.1
6,552,921	-				+0.5
6,552,921	-				+0.4
6,552,959	+				+1.1
6,552,960	-				-2.2
6,553,020	+				+0.9
6,553,020	+				-0.3
6,553,020	+				+0.0
6,553,020	+				+0.8
6,553,020	+				+0.5
6,553,020	+				-1.5
6,553,020	+				+1.7
6,553,020	+				+0.4
6,553,021	-				-1.3
6,553,021	-				-0.2
6,553,021	-				+0.7
6,553,021	-				+1.0
6,553,021	-				+0.8
6,553,029	+				-1.0
6,553,029	+				-0.1
6,553,029	+				+1.3
6,553,029	+				-0.8
6,553,030	-				+0.9
6,553,030	-				+0.4
6,553,030	-				+1.2
6,553,032	+				-0.1
6,553,032	+				-0.4
6,553,032	+				+0.4
6,553,032	+				+1.0
6,553,032	+				+0.3
6,553,032	+				-0.7
6,553,032	+				-1.0
6,553,032	+				-0.2
6,553,032	+				+0.4
6,553,032	+				+0.5
6,553,032	+				+0.9
6,553,032	+				+1.3
6,553,032	+				+0.6
6,553,032	+				-0.3
6,553,033	-				+2.2
6,553,033	-				+1.1
6,553,033	-				-0.2
6,553,033	-				+0.2
6,553,033	-				-0.8
6,553,117	+				-0.3
6,553,117	+				-1.9
6,553,117	+				-1.1
6,553,117	+				+1.2
6,553,118	-				-2.3
6,553,118	-				+0.3
6,553,118	-				+0.5
6,553,118	-				+1.2
6,553,129	+				-1.6