Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24770

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
5,549,954	+		PFLU_RS24765	0.52	-1.3
5,549,954	+		PFLU_RS24765	0.52	-2.2
5,549,954	+		PFLU_RS24765	0.52	-1.6
5,549,954	+		PFLU_RS24765	0.52	-4.2
5,549,954	+		PFLU_RS24765	0.52	-2.1
5,549,954	+		PFLU_RS24765	0.52	-2.0
5,549,954	+		PFLU_RS24765	0.52	-2.7
5,549,954	+		PFLU_RS24765	0.52	-2.8
5,549,954	+		PFLU_RS24765	0.52	-2.3
5,549,954	+		PFLU_RS24765	0.52	-3.2
5,549,954	+		PFLU_RS24765	0.52	-2.0
5,549,954	+		PFLU_RS24765	0.52	-0.9
5,549,954	+		PFLU_RS24765	0.52	-2.7
5,549,955	-		PFLU_RS24765	0.52	-2.3
5,549,955	-		PFLU_RS24765	0.52	-2.2
5,549,955	-		PFLU_RS24765	0.52	-1.2
5,549,955	-		PFLU_RS24765	0.52	-1.1
5,549,955	-		PFLU_RS24765	0.52	-1.8
5,549,958	+		PFLU_RS24765	0.52	-1.6
5,549,958	+		PFLU_RS24765	0.52	-2.7
5,549,958	+		PFLU_RS24765	0.52	-0.7
5,549,958	+		PFLU_RS24765	0.52	-2.6
5,549,958	+		PFLU_RS24765	0.52	-2.2
5,549,958	+		PFLU_RS24765	0.52	-1.6
5,549,958	+		PFLU_RS24765	0.52	-2.6
5,549,958	+		PFLU_RS24765	0.52	-0.9
5,549,958	+		PFLU_RS24765	0.52	-1.7
5,549,958	+		PFLU_RS24765	0.52	-3.7
5,549,958	+		PFLU_RS24765	0.52	-2.7
5,549,958	+		PFLU_RS24765	0.52	-0.7
5,549,959	-		PFLU_RS24765	0.52	-3.5
5,549,959	-		PFLU_RS24765	0.52	-1.6
5,549,959	-		PFLU_RS24765	0.52	-3.8
5,549,959	-		PFLU_RS24765	0.52	-0.9
5,549,959	-		PFLU_RS24765	0.52	-1.7
5,549,959	-		PFLU_RS24765	0.52	-1.7
5,549,959	-		PFLU_RS24765	0.52	-1.8
5,549,959	-		PFLU_RS24765	0.52	-2.3
5,549,959	-		PFLU_RS24765	0.52	-1.8
5,549,959	-		PFLU_RS24765	0.52	-3.1
5,549,959	-		PFLU_RS24765	0.52	-4.0
5,549,959	-		PFLU_RS24765	0.52	-2.8
5,549,959	-		PFLU_RS24765	0.52	-2.7
5,549,959	-		PFLU_RS24765	0.52	-1.1
5,549,959	-		PFLU_RS24765	0.52	-1.5
5,549,959	-		PFLU_RS24765	0.52	-1.3
5,549,959	-		PFLU_RS24765	0.52	-2.5
5,549,959	-		PFLU_RS24765	0.52	-2.4
5,550,060	+		PFLU_RS24765	0.58	-3.1
5,550,060	+		PFLU_RS24765	0.58	-1.6
5,550,060	+		PFLU_RS24765	0.58	-2.9
5,550,061	-		PFLU_RS24765	0.58	-2.6
5,550,061	-		PFLU_RS24765	0.58	-2.1
5,550,061	-		PFLU_RS24765	0.58	-2.1
5,550,061	-		PFLU_RS24765	0.58	-2.8
5,550,061	-		PFLU_RS24765	0.58	-0.9
5,550,061	-		PFLU_RS24765	0.58	-2.0
5,550,162	+		PFLU_RS24765	0.64	-0.3
5,550,162	+		PFLU_RS24765	0.64	-3.3
5,550,198	+		PFLU_RS24765	0.66	-0.5
5,550,198	+		PFLU_RS24765	0.66	-3.0
5,550,199	-		PFLU_RS24765	0.66	-2.8
5,550,199	-		PFLU_RS24765	0.66	-1.1
5,550,199	-		PFLU_RS24765	0.66	-2.8
5,550,316	+		PFLU_RS24765	0.73	-2.3
5,550,316	+		PFLU_RS24765	0.73	-3.7
5,550,316	+		PFLU_RS24765	0.73	-3.2
5,550,316	+		PFLU_RS24765	0.73	-2.7
5,550,316	+		PFLU_RS24765	0.73	-3.0
5,550,316	+		PFLU_RS24765	0.73	-2.1
5,550,317	-		PFLU_RS24765	0.74	-0.9
5,550,317	-		PFLU_RS24765	0.74	-1.0
5,550,366	+		PFLU_RS24765	0.76	-1.7
5,550,366	+		PFLU_RS24765	0.76	-0.1
5,550,366	+		PFLU_RS24765	0.76	-1.9
5,550,366	+		PFLU_RS24765	0.76	-0.7
5,550,366	+		PFLU_RS24765	0.76	-3.6
5,550,366	+		PFLU_RS24765	0.76	+1.1
5,550,366	+		PFLU_RS24765	0.76	-3.5
5,550,366	+		PFLU_RS24765	0.76	-2.7
5,550,367	-		PFLU_RS24765	0.76	-1.3
5,550,367	-		PFLU_RS24765	0.76	-2.2
5,550,367	-		PFLU_RS24765	0.76	-2.1
5,550,367	-		PFLU_RS24765	0.76	-2.7
5,550,388	-		PFLU_RS24765	0.78	-2.8
5,550,388	-		PFLU_RS24765	0.78	-1.9
5,550,388	-		PFLU_RS24765	0.78	-2.7
5,550,576	+		PFLU_RS24765	0.89	-0.4
5,550,576	+		PFLU_RS24765	0.89	-0.9
5,550,576	+		PFLU_RS24765	0.89	-0.2
5,550,577	-		PFLU_RS24765	0.89	-0.8
5,550,577	-		PFLU_RS24765	0.89	-1.5
5,550,577	-		PFLU_RS24765	0.89	-3.6
5,550,577	-		PFLU_RS24765	0.89	-1.7
5,550,577	-		PFLU_RS24765	0.89	-1.8
5,550,611	+				-1.0
5,550,611	+				-1.8
5,550,624	+				-2.8
5,550,624	+				-3.5
5,550,624	+				-3.2
5,550,672	-				-3.7
5,550,722	+				+0.6
5,550,722	+				-1.3
5,550,759	+				-0.0
5,550,773	-				+0.7
5,550,773	-				-0.2
5,550,773	-				-0.2
5,550,793	+				+0.7
5,550,875	+				-0.9
5,550,875	+				-2.1
5,550,875	+				-0.3
5,550,875	+				+0.8
5,550,875	+				-0.3
5,550,875	+				+0.8
5,550,875	+				-0.5
5,550,875	+				-0.6
5,550,875	+				+0.2
5,550,875	+				+1.5
5,550,875	+				-0.1
5,550,941	+				+0.0
5,550,941	+				-0.3
5,551,084	+		PFLU_RS24770	0.20	+0.5
5,551,084	+		PFLU_RS24770	0.20	-0.5
5,551,084	+		PFLU_RS24770	0.20	+0.9
5,551,085	-		PFLU_RS24770	0.20	-0.3
5,551,132	+		PFLU_RS24770	0.26	+1.1
5,551,132	+		PFLU_RS24770	0.26	-0.2
5,551,132	+		PFLU_RS24770	0.26	-0.4
5,551,132	+		PFLU_RS24770	0.26	+0.5
5,551,133	-		PFLU_RS24770	0.26	+0.3
5,551,133	-		PFLU_RS24770	0.26	+0.6
5,551,133	-		PFLU_RS24770	0.26	-2.2
5,551,133	-		PFLU_RS24770	0.26	-0.1
5,551,210	+		PFLU_RS24770	0.36	-0.8
5,551,210	+		PFLU_RS24770	0.36	+1.1
5,551,210	+		PFLU_RS24770	0.36	+0.4
5,551,210	+		PFLU_RS24770	0.36	+0.3
5,551,210	+		PFLU_RS24770	0.36	+0.2
5,551,210	+		PFLU_RS24770	0.36	+0.7
5,551,210	+		PFLU_RS24770	0.36	+0.7
5,551,210	+		PFLU_RS24770	0.36	-0.2
5,551,210	+		PFLU_RS24770	0.36	+1.2
5,551,210	+		PFLU_RS24770	0.36	-0.4
5,551,211	-		PFLU_RS24770	0.36	+0.7
5,551,211	-		PFLU_RS24770	0.36	+1.7
5,551,211	-		PFLU_RS24770	0.36	-1.3
5,551,211	-		PFLU_RS24770	0.36	-0.4
5,551,211	-		PFLU_RS24770	0.36	-1.7
5,551,211	-		PFLU_RS24770	0.36	+1.8
5,551,211	-		PFLU_RS24770	0.36	+1.0
5,551,211	-		PFLU_RS24770	0.36	+1.1
5,551,211	-		PFLU_RS24770	0.36	+0.2
5,551,212	+		PFLU_RS24770	0.36	+0.3
5,551,212	+		PFLU_RS24770	0.36	-0.5
5,551,212	+		PFLU_RS24770	0.36	-0.1
5,551,212	+		PFLU_RS24770	0.36	+1.7
5,551,212	+		PFLU_RS24770	0.36	+0.5
5,551,212	+		PFLU_RS24770	0.36	-0.4
5,551,212	+		PFLU_RS24770	0.36	-0.4
5,551,212	+		PFLU_RS24770	0.36	-2.1
5,551,212	+		PFLU_RS24770	0.36	+1.1
5,551,213	-		PFLU_RS24770	0.36	+0.2
5,551,213	-		PFLU_RS24770	0.36	+0.3
5,551,213	-		PFLU_RS24770	0.36	-0.4
5,551,213	-		PFLU_RS24770	0.36	-0.3
5,551,268	-		PFLU_RS24770	0.43	-0.3
5,551,333	+		PFLU_RS24770	0.52	-1.0
5,551,333	+		PFLU_RS24770	0.52	+1.3
5,551,333	+		PFLU_RS24770	0.52	-1.3
5,551,333	+		PFLU_RS24770	0.52	+0.8
5,551,333	+		PFLU_RS24770	0.52	+0.5
5,551,333	+		PFLU_RS24770	0.52	+0.3
5,551,333	+		PFLU_RS24770	0.52	-0.1
5,551,334	-		PFLU_RS24770	0.52	+0.9
5,551,334	-		PFLU_RS24770	0.52	+0.4
5,551,334	-		PFLU_RS24770	0.52	+1.4
5,551,334	-		PFLU_RS24770	0.52	+0.5
5,551,334	-		PFLU_RS24770	0.52	+1.2
5,551,334	-		PFLU_RS24770	0.52	+0.4
5,551,334	-		PFLU_RS24770	0.52	-0.3
5,551,334	-		PFLU_RS24770	0.52	+0.2
5,551,379	-		PFLU_RS24770	0.57	+0.7
5,551,379	-		PFLU_RS24770	0.57	-0.5
5,551,477	+		PFLU_RS24770	0.70	+0.4
5,551,477	+		PFLU_RS24770	0.70	+0.1
5,551,477	+		PFLU_RS24770	0.70	-1.8
5,551,477	+		PFLU_RS24770	0.70	-0.6
5,551,477	+		PFLU_RS24770	0.70	+0.1
5,551,477	+		PFLU_RS24770	0.70	+1.2
5,551,477	+		PFLU_RS24770	0.70	+0.5
5,551,478	-		PFLU_RS24770	0.70	+0.9
5,551,478	-		PFLU_RS24770	0.70	+0.8
5,551,478	-		PFLU_RS24770	0.70	+0.2
5,551,497	+		PFLU_RS24770	0.72	+0.3
5,551,497	+		PFLU_RS24770	0.72	+0.5
5,551,715	+				-0.2
5,551,716	-				-0.2
5,551,716	-				+0.8
5,551,801	-				+1.5
5,551,801	-				-1.3
5,551,801	-				+0.2
5,551,801	-				+0.6
5,551,893	+		PFLU_RS24775	0.17	-1.0
5,551,894	-		PFLU_RS24775	0.17	+0.1
5,551,911	+		PFLU_RS24775	0.18	+1.3
5,551,911	+		PFLU_RS24775	0.18	-0.9
5,551,911	+		PFLU_RS24775	0.18	-1.3
5,551,912	-		PFLU_RS24775	0.18	-0.8
5,551,912	-		PFLU_RS24775	0.18	+0.8
5,551,912	-		PFLU_RS24775	0.18	+0.8
5,551,912	-		PFLU_RS24775	0.18	-1.1
5,551,912	-		PFLU_RS24775	0.18	+0.5
5,551,912	-		PFLU_RS24775	0.18	-0.5
5,551,912	-		PFLU_RS24775	0.18	-0.2
5,551,987	-		PFLU_RS24775	0.25	+0.4
5,551,987	-		PFLU_RS24775	0.25	+0.3
5,551,987	-		PFLU_RS24775	0.25	-0.5
5,552,047	-		PFLU_RS24775	0.30	+1.1
5,552,079	+		PFLU_RS24775	0.33	-2.1
5,552,079	+		PFLU_RS24775	0.33	+1.1
5,552,079	+		PFLU_RS24775	0.33	+0.5
5,552,079	+		PFLU_RS24775	0.33	-0.4
5,552,079	+		PFLU_RS24775	0.33	+0.1
5,552,080	-		PFLU_RS24775	0.33	+0.1
5,552,080	-		PFLU_RS24775	0.33	+0.5
5,552,080	-		PFLU_RS24775	0.33	+0.0
5,552,080	-		PFLU_RS24775	0.33	+0.5
5,552,080	-		PFLU_RS24775	0.33	-0.2
5,552,130	+		PFLU_RS24775	0.37	+0.2
5,552,130	+		PFLU_RS24775	0.37	+0.1
5,552,157	+		PFLU_RS24775	0.40	+0.2
5,552,196	+		PFLU_RS24775	0.43	+0.2
5,552,217	-		PFLU_RS24775	0.45	+1.3
5,552,244	-		PFLU_RS24775	0.47	+1.5
5,552,256	+		PFLU_RS24775	0.48	+0.8
5,552,277	+		PFLU_RS24775	0.50	+0.4
5,552,277	+		PFLU_RS24775	0.50	+1.5
5,552,277	+		PFLU_RS24775	0.50	+0.9
5,552,277	+		PFLU_RS24775	0.50	-0.1
5,552,277	+		PFLU_RS24775	0.50	+0.8
5,552,277	+		PFLU_RS24775	0.50	+0.8
5,552,277	+		PFLU_RS24775	0.50	+1.1
5,552,277	+		PFLU_RS24775	0.50	-0.3
5,552,278	-		PFLU_RS24775	0.50	-0.3
5,552,278	-		PFLU_RS24775	0.50	-1.1
5,552,278	-		PFLU_RS24775	0.50	-0.3
5,552,278	-		PFLU_RS24775	0.50	+0.1
5,552,278	-		PFLU_RS24775	0.50	+1.1
5,552,282	-		PFLU_RS24775	0.50	+0.4
5,552,487	+		PFLU_RS24775	0.68	-1.7
5,552,487	+		PFLU_RS24775	0.68	-1.3
5,552,487	+		PFLU_RS24775	0.68	-0.2
5,552,488	-		PFLU_RS24775	0.68	+1.3
5,552,488	-		PFLU_RS24775	0.68	+1.3
5,552,488	-		PFLU_RS24775	0.68	+1.3
5,552,488	-		PFLU_RS24775	0.68	-0.5
5,552,488	-		PFLU_RS24775	0.68	-1.1
5,552,496	+		PFLU_RS24775	0.69	+0.2
5,552,619	+		PFLU_RS24775	0.80	-0.3
5,552,619	+		PFLU_RS24775	0.80	+0.1
5,552,620	-		PFLU_RS24775	0.80	+1.5
5,552,623	+		PFLU_RS24775	0.80	+0.1
5,552,624	-		PFLU_RS24775	0.80	-0.4
5,552,624	-		PFLU_RS24775	0.80	+0.5
5,552,683	-		PFLU_RS24775	0.85	-0.7
5,552,683	-		PFLU_RS24775	0.85	+0.9
5,552,705	-		PFLU_RS24775	0.87	-0.5