Experiment: succinate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23360 and PFLU_RS23365 are separated by 575 nucleotides PFLU_RS23365 and PFLU_RS23370 are separated by 138 nucleotides
PFLU_RS23360: PFLU_RS23360 - DUF2790 domain-containing protein, at 5,249,580 to 5,249,849
_RS23360
PFLU_RS23365: PFLU_RS23365 - ribonucleotide-diphosphate reductase subunit beta, at 5,250,425 to 5,251,675
_RS23365
PFLU_RS23370: PFLU_RS23370 - AAA family ATPase, at 5,251,814 to 5,253,757
_RS23370
Position (kb) 5250
5251
5252 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5249.445 kb on - strand at 5249.448 kb on + strand at 5249.448 kb on + strand at 5249.449 kb on - strand at 5249.514 kb on - strand at 5249.569 kb on + strand at 5249.593 kb on + strand at 5249.593 kb on + strand at 5249.593 kb on + strand at 5249.593 kb on + strand at 5249.593 kb on + strand at 5249.593 kb on + strand at 5249.594 kb on - strand at 5249.594 kb on - strand at 5249.656 kb on + strand, within PFLU_RS23360 at 5249.656 kb on + strand, within PFLU_RS23360 at 5249.656 kb on + strand, within PFLU_RS23360 at 5249.656 kb on + strand, within PFLU_RS23360 at 5249.657 kb on - strand, within PFLU_RS23360 at 5249.657 kb on - strand, within PFLU_RS23360 at 5249.688 kb on + strand, within PFLU_RS23360 at 5249.689 kb on - strand, within PFLU_RS23360 at 5249.694 kb on + strand, within PFLU_RS23360 at 5249.694 kb on + strand, within PFLU_RS23360 at 5249.694 kb on + strand, within PFLU_RS23360 at 5249.694 kb on + strand, within PFLU_RS23360 at 5249.694 kb on + strand, within PFLU_RS23360 at 5249.695 kb on - strand, within PFLU_RS23360 at 5249.695 kb on - strand, within PFLU_RS23360 at 5249.695 kb on - strand, within PFLU_RS23360 at 5249.695 kb on - strand, within PFLU_RS23360 at 5249.722 kb on + strand, within PFLU_RS23360 at 5249.815 kb on - strand, within PFLU_RS23360 at 5249.850 kb on + strand at 5249.850 kb on + strand at 5249.863 kb on + strand at 5249.864 kb on - strand at 5249.965 kb on + strand at 5249.966 kb on - strand at 5249.966 kb on - strand at 5249.966 kb on - strand at 5249.966 kb on - strand at 5249.989 kb on + strand at 5249.989 kb on + strand at 5249.989 kb on + strand at 5249.989 kb on + strand at 5249.989 kb on + strand at 5249.990 kb on - strand at 5249.990 kb on - strand at 5249.990 kb on - strand at 5249.990 kb on - strand at 5249.990 kb on - strand at 5249.991 kb on + strand at 5249.992 kb on - strand at 5249.992 kb on - strand at 5250.075 kb on - strand at 5250.075 kb on - strand at 5250.075 kb on - strand at 5250.076 kb on + strand at 5250.076 kb on + strand at 5250.076 kb on + strand at 5250.077 kb on - strand at 5250.077 kb on - strand at 5250.160 kb on + strand at 5250.160 kb on + strand at 5250.160 kb on + strand at 5250.161 kb on - strand at 5250.174 kb on - strand at 5250.197 kb on + strand at 5250.197 kb on + strand at 5250.247 kb on - strand at 5250.290 kb on - strand at 5250.290 kb on - strand at 5250.298 kb on + strand at 5250.311 kb on - strand at 5250.311 kb on - strand at 5250.311 kb on - strand at 5250.469 kb on - strand at 5250.469 kb on - strand at 5251.162 kb on + strand, within PFLU_RS23365 at 5251.191 kb on - strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.193 kb on + strand, within PFLU_RS23365 at 5251.220 kb on + strand, within PFLU_RS23365 at 5251.293 kb on - strand, within PFLU_RS23365 at 5251.293 kb on - strand, within PFLU_RS23365 at 5251.293 kb on - strand, within PFLU_RS23365 at 5251.293 kb on - strand, within PFLU_RS23365 at 5251.293 kb on - strand, within PFLU_RS23365 at 5251.499 kb on + strand, within PFLU_RS23365 at 5251.499 kb on + strand, within PFLU_RS23365 at 5251.637 kb on - strand at 5251.644 kb on - strand at 5251.644 kb on - strand at 5251.644 kb on - strand at 5251.705 kb on + strand at 5251.706 kb on - strand at 5251.706 kb on - strand at 5251.710 kb on + strand at 5251.710 kb on + strand at 5251.710 kb on + strand at 5251.710 kb on + strand at 5251.710 kb on + strand at 5251.711 kb on - strand at 5251.765 kb on + strand at 5251.765 kb on + strand at 5251.773 kb on + strand at 5251.773 kb on + strand at 5251.773 kb on + strand at 5251.773 kb on + strand at 5251.773 kb on + strand at 5251.774 kb on - strand at 5251.774 kb on - strand at 5251.783 kb on - strand at 5251.825 kb on - strand at 5251.871 kb on + strand at 5251.871 kb on + strand at 5251.872 kb on - strand at 5251.882 kb on - strand at 5252.024 kb on - strand, within PFLU_RS23370 at 5252.024 kb on - strand, within PFLU_RS23370 at 5252.111 kb on - strand, within PFLU_RS23370 at 5252.122 kb on - strand, within PFLU_RS23370 at 5252.138 kb on + strand, within PFLU_RS23370 at 5252.138 kb on + strand, within PFLU_RS23370 at 5252.138 kb on + strand, within PFLU_RS23370 at 5252.169 kb on + strand, within PFLU_RS23370 at 5252.169 kb on + strand, within PFLU_RS23370 at 5252.229 kb on - strand, within PFLU_RS23370 at 5252.232 kb on + strand, within PFLU_RS23370 at 5252.374 kb on - strand, within PFLU_RS23370 at 5252.379 kb on - strand, within PFLU_RS23370 at 5252.379 kb on - strand, within PFLU_RS23370 at 5252.382 kb on + strand, within PFLU_RS23370 at 5252.382 kb on + strand, within PFLU_RS23370 at 5252.383 kb on - strand, within PFLU_RS23370 at 5252.384 kb on + strand, within PFLU_RS23370 at 5252.384 kb on + strand, within PFLU_RS23370 at 5252.385 kb on - strand, within PFLU_RS23370 at 5252.385 kb on - strand, within PFLU_RS23370 at 5252.385 kb on - strand, within PFLU_RS23370 at 5252.386 kb on + strand, within PFLU_RS23370 at 5252.386 kb on + strand, within PFLU_RS23370 at 5252.388 kb on + strand, within PFLU_RS23370 at 5252.476 kb on - strand, within PFLU_RS23370 at 5252.543 kb on - strand, within PFLU_RS23370 at 5252.608 kb on - strand, within PFLU_RS23370 at 5252.671 kb on + strand, within PFLU_RS23370
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C); with MOPS remove 5,249,445 - -0.8 5,249,448 + -1.9 5,249,448 + +0.9 5,249,449 - +0.8 5,249,514 - -0.7 5,249,569 + +0.2 5,249,593 + +0.0 5,249,593 + +0.1 5,249,593 + +1.4 5,249,593 + -1.0 5,249,593 + +2.0 5,249,593 + -0.4 5,249,594 - -0.1 5,249,594 - -0.2 5,249,656 + PFLU_RS23360 0.28 -0.8 5,249,656 + PFLU_RS23360 0.28 +1.9 5,249,656 + PFLU_RS23360 0.28 -0.0 5,249,656 + PFLU_RS23360 0.28 +0.3 5,249,657 - PFLU_RS23360 0.29 +0.3 5,249,657 - PFLU_RS23360 0.29 +1.1 5,249,688 + PFLU_RS23360 0.40 +1.9 5,249,689 - PFLU_RS23360 0.40 +0.5 5,249,694 + PFLU_RS23360 0.42 -0.7 5,249,694 + PFLU_RS23360 0.42 -0.3 5,249,694 + PFLU_RS23360 0.42 -0.1 5,249,694 + PFLU_RS23360 0.42 -1.1 5,249,694 + PFLU_RS23360 0.42 -0.6 5,249,695 - PFLU_RS23360 0.43 +0.8 5,249,695 - PFLU_RS23360 0.43 -0.4 5,249,695 - PFLU_RS23360 0.43 +0.6 5,249,695 - PFLU_RS23360 0.43 -1.1 5,249,722 + PFLU_RS23360 0.53 -1.2 5,249,815 - PFLU_RS23360 0.87 -0.2 5,249,850 + -0.5 5,249,850 + +0.8 5,249,863 + +0.1 5,249,864 - +1.5 5,249,965 + +1.5 5,249,966 - +0.7 5,249,966 - +0.5 5,249,966 - +2.6 5,249,966 - +1.9 5,249,989 + -1.2 5,249,989 + -0.1 5,249,989 + +1.3 5,249,989 + -0.0 5,249,989 + +0.7 5,249,990 - +0.9 5,249,990 - +0.5 5,249,990 - -0.5 5,249,990 - -0.5 5,249,990 - +0.3 5,249,991 + +0.0 5,249,992 - -0.9 5,249,992 - +0.4 5,250,075 - -2.2 5,250,075 - -0.9 5,250,075 - -1.0 5,250,076 + -0.1 5,250,076 + -0.6 5,250,076 + -1.6 5,250,077 - +0.2 5,250,077 - +0.6 5,250,160 + -0.4 5,250,160 + -0.1 5,250,160 + -0.1 5,250,161 - +0.9 5,250,174 - -0.8 5,250,197 + -0.1 5,250,197 + -0.0 5,250,247 - +1.7 5,250,290 - +0.7 5,250,290 - -0.1 5,250,298 + +0.2 5,250,311 - +1.1 5,250,311 - +0.7 5,250,311 - +0.4 5,250,469 - -0.1 5,250,469 - -0.9 5,251,162 + PFLU_RS23365 0.59 -0.1 5,251,191 - PFLU_RS23365 0.61 +0.5 5,251,193 + PFLU_RS23365 0.61 +0.3 5,251,193 + PFLU_RS23365 0.61 +1.5 5,251,193 + PFLU_RS23365 0.61 +0.5 5,251,193 + PFLU_RS23365 0.61 -0.2 5,251,193 + PFLU_RS23365 0.61 -0.6 5,251,193 + PFLU_RS23365 0.61 -1.8 5,251,193 + PFLU_RS23365 0.61 +1.1 5,251,193 + PFLU_RS23365 0.61 +1.1 5,251,220 + PFLU_RS23365 0.64 -0.1 5,251,293 - PFLU_RS23365 0.69 +1.2 5,251,293 - PFLU_RS23365 0.69 -0.5 5,251,293 - PFLU_RS23365 0.69 +1.9 5,251,293 - PFLU_RS23365 0.69 -0.1 5,251,293 - PFLU_RS23365 0.69 -0.1 5,251,499 + PFLU_RS23365 0.86 +0.3 5,251,499 + PFLU_RS23365 0.86 +0.5 5,251,637 - +0.2 5,251,644 - +0.5 5,251,644 - +0.9 5,251,644 - -0.4 5,251,705 + +1.1 5,251,706 - -0.8 5,251,706 - +1.3 5,251,710 + -1.1 5,251,710 + +0.6 5,251,710 + -0.3 5,251,710 + +0.5 5,251,710 + +0.2 5,251,711 - +0.2 5,251,765 + -1.2 5,251,765 + +1.0 5,251,773 + -0.1 5,251,773 + -2.1 5,251,773 + -1.1 5,251,773 + -0.6 5,251,773 + -0.2 5,251,774 - -1.6 5,251,774 - -0.6 5,251,783 - +0.0 5,251,825 - -0.2 5,251,871 + +0.6 5,251,871 + +1.9 5,251,872 - -0.5 5,251,882 - -1.1 5,252,024 - PFLU_RS23370 0.11 +1.0 5,252,024 - PFLU_RS23370 0.11 +0.6 5,252,111 - PFLU_RS23370 0.15 +0.5 5,252,122 - PFLU_RS23370 0.16 +0.8 5,252,138 + PFLU_RS23370 0.17 +0.0 5,252,138 + PFLU_RS23370 0.17 -0.8 5,252,138 + PFLU_RS23370 0.17 +0.4 5,252,169 + PFLU_RS23370 0.18 +0.9 5,252,169 + PFLU_RS23370 0.18 +3.9 5,252,229 - PFLU_RS23370 0.21 +0.5 5,252,232 + PFLU_RS23370 0.22 +0.4 5,252,374 - PFLU_RS23370 0.29 +0.7 5,252,379 - PFLU_RS23370 0.29 +0.6 5,252,379 - PFLU_RS23370 0.29 -0.3 5,252,382 + PFLU_RS23370 0.29 -0.9 5,252,382 + PFLU_RS23370 0.29 -0.6 5,252,383 - PFLU_RS23370 0.29 -0.7 5,252,384 + PFLU_RS23370 0.29 -0.5 5,252,384 + PFLU_RS23370 0.29 -0.9 5,252,385 - PFLU_RS23370 0.29 +0.2 5,252,385 - PFLU_RS23370 0.29 -0.3 5,252,385 - PFLU_RS23370 0.29 -0.3 5,252,386 + PFLU_RS23370 0.29 -1.2 5,252,386 + PFLU_RS23370 0.29 +0.1 5,252,388 + PFLU_RS23370 0.30 -0.5 5,252,476 - PFLU_RS23370 0.34 +0.2 5,252,543 - PFLU_RS23370 0.38 -0.1 5,252,608 - PFLU_RS23370 0.41 -0.5 5,252,671 + PFLU_RS23370 0.44 -2.1
Or see this region's nucleotide sequence