Experiment: succinate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS22765 and PFLU_RS22770 are separated by 107 nucleotides PFLU_RS22770 and PFLU_RS22775 are separated by 54 nucleotides PFLU_RS22775 and PFLU_RS22780 are separated by 83 nucleotides PFLU_RS22780 and PFLU_RS22785 are separated by 235 nucleotides
PFLU_RS22765: PFLU_RS22765 - HAD-IA family hydrolase, at 5,125,395 to 5,126,084
_RS22765
PFLU_RS22770: PFLU_RS22770 - DUF2784 domain-containing protein, at 5,126,192 to 5,126,557
_RS22770
PFLU_RS22775: PFLU_RS22775 - DUF4337 domain-containing protein, at 5,126,612 to 5,127,190
_RS22775
PFLU_RS22780: PFLU_RS22780 - hypothetical protein, at 5,127,274 to 5,127,642
_RS22780
PFLU_RS22785: PFLU_RS22785 - DMT family transporter, at 5,127,878 to 5,128,918
_RS22785
Position (kb) 5126
5127
5128 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5125.758 kb on - strand, within PFLU_RS22765 at 5125.758 kb on - strand, within PFLU_RS22765 at 5125.868 kb on + strand, within PFLU_RS22765 at 5125.868 kb on + strand, within PFLU_RS22765 at 5125.868 kb on + strand, within PFLU_RS22765 at 5125.868 kb on + strand, within PFLU_RS22765 at 5125.869 kb on - strand, within PFLU_RS22765 at 5125.897 kb on + strand, within PFLU_RS22765 at 5125.897 kb on + strand, within PFLU_RS22765 at 5125.897 kb on + strand, within PFLU_RS22765 at 5125.898 kb on - strand, within PFLU_RS22765 at 5125.898 kb on - strand, within PFLU_RS22765 at 5125.898 kb on - strand, within PFLU_RS22765 at 5125.898 kb on - strand, within PFLU_RS22765 at 5125.898 kb on - strand, within PFLU_RS22765 at 5125.954 kb on + strand, within PFLU_RS22765 at 5125.955 kb on - strand, within PFLU_RS22765 at 5125.955 kb on - strand, within PFLU_RS22765 at 5125.955 kb on - strand, within PFLU_RS22765 at 5125.955 kb on - strand, within PFLU_RS22765 at 5125.999 kb on + strand, within PFLU_RS22765 at 5126.109 kb on + strand at 5126.109 kb on + strand at 5126.109 kb on + strand at 5126.110 kb on - strand at 5126.110 kb on - strand at 5126.158 kb on + strand at 5126.158 kb on + strand at 5126.158 kb on + strand at 5126.159 kb on - strand at 5126.159 kb on - strand at 5126.159 kb on - strand at 5126.190 kb on + strand at 5126.191 kb on - strand at 5126.199 kb on - strand at 5126.205 kb on + strand at 5126.205 kb on + strand at 5126.205 kb on + strand at 5126.205 kb on + strand at 5126.205 kb on + strand at 5126.206 kb on - strand at 5126.432 kb on + strand, within PFLU_RS22770 at 5126.432 kb on + strand, within PFLU_RS22770 at 5126.432 kb on + strand, within PFLU_RS22770 at 5126.432 kb on + strand, within PFLU_RS22770 at 5126.522 kb on + strand at 5126.522 kb on + strand at 5126.523 kb on - strand at 5126.523 kb on - strand at 5126.523 kb on - strand at 5126.523 kb on - strand at 5126.756 kb on + strand, within PFLU_RS22775 at 5126.843 kb on + strand, within PFLU_RS22775 at 5126.844 kb on - strand, within PFLU_RS22775 at 5126.846 kb on + strand, within PFLU_RS22775 at 5126.846 kb on + strand, within PFLU_RS22775 at 5126.846 kb on + strand, within PFLU_RS22775 at 5126.893 kb on + strand, within PFLU_RS22775 at 5126.894 kb on - strand, within PFLU_RS22775 at 5126.918 kb on + strand, within PFLU_RS22775 at 5126.918 kb on + strand, within PFLU_RS22775 at 5126.918 kb on + strand, within PFLU_RS22775 at 5126.918 kb on + strand, within PFLU_RS22775 at 5126.918 kb on + strand, within PFLU_RS22775 at 5126.919 kb on - strand, within PFLU_RS22775 at 5126.919 kb on - strand, within PFLU_RS22775 at 5126.940 kb on - strand, within PFLU_RS22775 at 5126.940 kb on - strand, within PFLU_RS22775 at 5126.940 kb on - strand, within PFLU_RS22775 at 5126.940 kb on - strand, within PFLU_RS22775 at 5127.094 kb on + strand, within PFLU_RS22775 at 5127.094 kb on + strand, within PFLU_RS22775 at 5127.134 kb on + strand at 5127.134 kb on + strand at 5127.166 kb on + strand at 5127.166 kb on + strand at 5127.167 kb on - strand at 5127.184 kb on + strand at 5127.184 kb on + strand at 5127.185 kb on - strand at 5127.185 kb on - strand at 5127.201 kb on + strand at 5127.217 kb on - strand at 5127.217 kb on - strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.253 kb on + strand at 5127.254 kb on - strand at 5127.254 kb on - strand at 5127.254 kb on - strand at 5127.308 kb on + strand at 5127.308 kb on + strand at 5127.309 kb on - strand at 5127.309 kb on - strand at 5127.309 kb on - strand at 5127.314 kb on + strand, within PFLU_RS22780 at 5127.314 kb on + strand, within PFLU_RS22780 at 5127.314 kb on + strand, within PFLU_RS22780 at 5127.314 kb on + strand, within PFLU_RS22780 at 5127.315 kb on - strand, within PFLU_RS22780 at 5127.315 kb on - strand, within PFLU_RS22780 at 5127.315 kb on - strand, within PFLU_RS22780 at 5127.315 kb on - strand, within PFLU_RS22780 at 5127.327 kb on + strand, within PFLU_RS22780 at 5127.328 kb on - strand, within PFLU_RS22780 at 5127.431 kb on + strand, within PFLU_RS22780 at 5127.432 kb on - strand, within PFLU_RS22780 at 5127.470 kb on + strand, within PFLU_RS22780 at 5127.470 kb on + strand, within PFLU_RS22780 at 5127.471 kb on - strand, within PFLU_RS22780 at 5127.494 kb on + strand, within PFLU_RS22780 at 5127.494 kb on + strand, within PFLU_RS22780 at 5127.495 kb on - strand, within PFLU_RS22780 at 5127.495 kb on - strand, within PFLU_RS22780 at 5127.548 kb on + strand, within PFLU_RS22780 at 5127.548 kb on + strand, within PFLU_RS22780 at 5127.548 kb on + strand, within PFLU_RS22780 at 5127.548 kb on + strand, within PFLU_RS22780 at 5127.549 kb on - strand, within PFLU_RS22780 at 5127.549 kb on - strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.593 kb on + strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.594 kb on - strand, within PFLU_RS22780 at 5127.596 kb on + strand, within PFLU_RS22780 at 5127.596 kb on + strand, within PFLU_RS22780 at 5127.596 kb on + strand, within PFLU_RS22780 at 5127.596 kb on + strand, within PFLU_RS22780 at 5127.597 kb on - strand, within PFLU_RS22780 at 5127.597 kb on - strand, within PFLU_RS22780 at 5127.597 kb on - strand, within PFLU_RS22780 at 5127.597 kb on - strand, within PFLU_RS22780 at 5127.631 kb on + strand at 5127.632 kb on - strand at 5127.644 kb on + strand at 5127.644 kb on + strand at 5127.644 kb on + strand at 5127.644 kb on + strand at 5127.644 kb on + strand at 5127.644 kb on + strand at 5127.645 kb on - strand at 5127.645 kb on - strand at 5127.645 kb on - strand at 5127.663 kb on + strand at 5127.683 kb on + strand at 5127.684 kb on - strand at 5127.713 kb on + strand at 5127.713 kb on + strand at 5127.714 kb on - strand at 5127.714 kb on - strand at 5127.730 kb on + strand at 5127.766 kb on + strand at 5127.766 kb on + strand at 5127.815 kb on - strand at 5127.830 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.848 kb on + strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.849 kb on - strand at 5127.886 kb on + strand at 5127.886 kb on + strand at 5127.886 kb on + strand at 5127.886 kb on + strand at 5127.887 kb on - strand at 5127.887 kb on - strand at 5127.896 kb on + strand at 5127.897 kb on - strand at 5127.897 kb on - strand at 5127.897 kb on - strand at 5127.973 kb on - strand at 5127.993 kb on - strand, within PFLU_RS22785 at 5127.993 kb on - strand, within PFLU_RS22785 at 5128.181 kb on - strand, within PFLU_RS22785
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C); with MOPS remove 5,125,758 - PFLU_RS22765 0.53 -0.8 5,125,758 - PFLU_RS22765 0.53 -0.2 5,125,868 + PFLU_RS22765 0.69 +0.6 5,125,868 + PFLU_RS22765 0.69 -0.4 5,125,868 + PFLU_RS22765 0.69 +0.3 5,125,868 + PFLU_RS22765 0.69 -0.4 5,125,869 - PFLU_RS22765 0.69 +0.2 5,125,897 + PFLU_RS22765 0.73 +0.7 5,125,897 + PFLU_RS22765 0.73 -0.9 5,125,897 + PFLU_RS22765 0.73 -0.3 5,125,898 - PFLU_RS22765 0.73 +0.1 5,125,898 - PFLU_RS22765 0.73 -0.1 5,125,898 - PFLU_RS22765 0.73 +1.0 5,125,898 - PFLU_RS22765 0.73 +0.9 5,125,898 - PFLU_RS22765 0.73 +0.2 5,125,954 + PFLU_RS22765 0.81 -1.6 5,125,955 - PFLU_RS22765 0.81 -0.9 5,125,955 - PFLU_RS22765 0.81 -0.7 5,125,955 - PFLU_RS22765 0.81 -0.2 5,125,955 - PFLU_RS22765 0.81 +0.4 5,125,999 + PFLU_RS22765 0.88 -0.2 5,126,109 + +0.7 5,126,109 + -1.1 5,126,109 + +0.6 5,126,110 - +0.5 5,126,110 - +0.7 5,126,158 + -0.5 5,126,158 + -0.1 5,126,158 + -0.1 5,126,159 - -0.4 5,126,159 - -0.1 5,126,159 - +0.3 5,126,190 + +1.2 5,126,191 - +1.1 5,126,199 - +0.9 5,126,205 + +0.2 5,126,205 + +0.7 5,126,205 + +0.3 5,126,205 + +0.1 5,126,205 + -1.3 5,126,206 - -0.1 5,126,432 + PFLU_RS22770 0.66 -0.3 5,126,432 + PFLU_RS22770 0.66 +0.9 5,126,432 + PFLU_RS22770 0.66 +0.1 5,126,432 + PFLU_RS22770 0.66 -1.2 5,126,522 + -0.1 5,126,522 + +0.4 5,126,523 - +1.7 5,126,523 - +0.8 5,126,523 - +0.1 5,126,523 - -0.5 5,126,756 + PFLU_RS22775 0.25 -0.0 5,126,843 + PFLU_RS22775 0.40 +0.6 5,126,844 - PFLU_RS22775 0.40 -0.5 5,126,846 + PFLU_RS22775 0.40 -0.1 5,126,846 + PFLU_RS22775 0.40 +1.3 5,126,846 + PFLU_RS22775 0.40 -0.0 5,126,893 + PFLU_RS22775 0.49 -0.5 5,126,894 - PFLU_RS22775 0.49 +1.0 5,126,918 + PFLU_RS22775 0.53 -0.4 5,126,918 + PFLU_RS22775 0.53 -0.9 5,126,918 + PFLU_RS22775 0.53 -1.4 5,126,918 + PFLU_RS22775 0.53 -0.4 5,126,918 + PFLU_RS22775 0.53 +0.2 5,126,919 - PFLU_RS22775 0.53 -0.4 5,126,919 - PFLU_RS22775 0.53 -0.4 5,126,940 - PFLU_RS22775 0.57 +0.8 5,126,940 - PFLU_RS22775 0.57 +0.8 5,126,940 - PFLU_RS22775 0.57 -0.6 5,126,940 - PFLU_RS22775 0.57 -0.9 5,127,094 + PFLU_RS22775 0.83 +0.9 5,127,094 + PFLU_RS22775 0.83 -0.5 5,127,134 + +0.4 5,127,134 + +0.6 5,127,166 + +0.3 5,127,166 + +1.5 5,127,167 - +0.1 5,127,184 + +1.9 5,127,184 + -2.8 5,127,185 - -1.4 5,127,185 - +0.1 5,127,201 + +0.2 5,127,217 - -0.0 5,127,217 - -1.7 5,127,253 + -0.8 5,127,253 + +0.9 5,127,253 + +0.1 5,127,253 + -0.2 5,127,253 + +1.2 5,127,253 + -0.9 5,127,253 + +0.3 5,127,253 + -0.3 5,127,254 - -1.4 5,127,254 - +0.5 5,127,254 - -0.2 5,127,308 + -0.5 5,127,308 + +0.0 5,127,309 - +0.2 5,127,309 - -0.2 5,127,309 - +0.2 5,127,314 + PFLU_RS22780 0.11 +0.9 5,127,314 + PFLU_RS22780 0.11 +0.4 5,127,314 + PFLU_RS22780 0.11 -0.3 5,127,314 + PFLU_RS22780 0.11 -0.4 5,127,315 - PFLU_RS22780 0.11 -0.3 5,127,315 - PFLU_RS22780 0.11 -0.4 5,127,315 - PFLU_RS22780 0.11 +0.8 5,127,315 - PFLU_RS22780 0.11 +0.6 5,127,327 + PFLU_RS22780 0.14 +0.1 5,127,328 - PFLU_RS22780 0.15 +1.8 5,127,431 + PFLU_RS22780 0.43 -0.8 5,127,432 - PFLU_RS22780 0.43 -0.4 5,127,470 + PFLU_RS22780 0.53 -0.1 5,127,470 + PFLU_RS22780 0.53 -0.3 5,127,471 - PFLU_RS22780 0.53 +1.0 5,127,494 + PFLU_RS22780 0.60 +0.5 5,127,494 + PFLU_RS22780 0.60 -0.0 5,127,495 - PFLU_RS22780 0.60 +0.4 5,127,495 - PFLU_RS22780 0.60 +1.0 5,127,548 + PFLU_RS22780 0.74 -0.2 5,127,548 + PFLU_RS22780 0.74 +0.9 5,127,548 + PFLU_RS22780 0.74 +0.4 5,127,548 + PFLU_RS22780 0.74 -0.0 5,127,549 - PFLU_RS22780 0.75 -0.2 5,127,549 - PFLU_RS22780 0.75 -0.4 5,127,593 + PFLU_RS22780 0.86 -0.7 5,127,593 + PFLU_RS22780 0.86 -0.1 5,127,593 + PFLU_RS22780 0.86 -0.6 5,127,593 + PFLU_RS22780 0.86 -0.1 5,127,593 + PFLU_RS22780 0.86 -0.1 5,127,593 + PFLU_RS22780 0.86 +0.7 5,127,593 + PFLU_RS22780 0.86 -0.1 5,127,593 + PFLU_RS22780 0.86 +0.3 5,127,593 + PFLU_RS22780 0.86 -0.7 5,127,593 + PFLU_RS22780 0.86 +1.3 5,127,593 + PFLU_RS22780 0.86 -1.2 5,127,593 + PFLU_RS22780 0.86 -0.7 5,127,593 + PFLU_RS22780 0.86 +0.2 5,127,593 + PFLU_RS22780 0.86 -0.4 5,127,593 + PFLU_RS22780 0.86 +0.5 5,127,594 - PFLU_RS22780 0.87 +0.2 5,127,594 - PFLU_RS22780 0.87 -0.6 5,127,594 - PFLU_RS22780 0.87 -0.1 5,127,594 - PFLU_RS22780 0.87 +1.1 5,127,594 - PFLU_RS22780 0.87 +0.6 5,127,594 - PFLU_RS22780 0.87 -0.2 5,127,594 - PFLU_RS22780 0.87 +1.1 5,127,594 - PFLU_RS22780 0.87 +0.3 5,127,596 + PFLU_RS22780 0.87 +0.4 5,127,596 + PFLU_RS22780 0.87 +0.4 5,127,596 + PFLU_RS22780 0.87 +0.4 5,127,596 + PFLU_RS22780 0.87 +0.6 5,127,597 - PFLU_RS22780 0.88 -1.0 5,127,597 - PFLU_RS22780 0.88 +0.7 5,127,597 - PFLU_RS22780 0.88 +0.8 5,127,597 - PFLU_RS22780 0.88 -0.6 5,127,631 + -0.8 5,127,632 - -0.2 5,127,644 + +0.3 5,127,644 + -0.8 5,127,644 + -0.4 5,127,644 + +0.3 5,127,644 + -0.2 5,127,644 + +0.2 5,127,645 - +0.7 5,127,645 - +0.6 5,127,645 - -0.7 5,127,663 + -1.1 5,127,683 + -0.3 5,127,684 - +0.4 5,127,713 + +0.4 5,127,713 + -1.4 5,127,714 - +0.3 5,127,714 - -1.0 5,127,730 + +1.0 5,127,766 + +1.3 5,127,766 + +0.6 5,127,815 - +0.5 5,127,830 + -1.5 5,127,848 + +1.0 5,127,848 + +0.8 5,127,848 + -0.7 5,127,848 + +0.2 5,127,848 + +0.2 5,127,848 + -0.9 5,127,848 + +0.0 5,127,848 + -0.4 5,127,848 + -0.1 5,127,848 + -0.5 5,127,849 - +0.1 5,127,849 - -0.1 5,127,849 - -0.9 5,127,849 - -0.5 5,127,849 - +0.0 5,127,849 - -0.5 5,127,849 - +0.2 5,127,849 - +0.1 5,127,849 - +1.1 5,127,849 - -0.1 5,127,849 - +0.9 5,127,849 - -0.2 5,127,849 - -0.2 5,127,849 - -0.9 5,127,849 - +0.2 5,127,849 - -0.0 5,127,849 - -0.4 5,127,849 - +0.4 5,127,886 + -0.3 5,127,886 + -1.9 5,127,886 + -1.1 5,127,886 + -0.4 5,127,887 - +0.3 5,127,887 - +1.0 5,127,896 + +2.5 5,127,897 - -2.2 5,127,897 - +0.5 5,127,897 - +0.6 5,127,973 - -0.6 5,127,993 - PFLU_RS22785 0.11 -1.9 5,127,993 - PFLU_RS22785 0.11 -0.6 5,128,181 - PFLU_RS22785 0.29 -0.3
Or see this region's nucleotide sequence