Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07515

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
1,669,657	+		PFLU_RS07510	0.65	-0.7
1,669,657	+		PFLU_RS07510	0.65	+0.7
1,669,657	+		PFLU_RS07510	0.65	+1.4
1,669,657	+		PFLU_RS07510	0.65	+0.1
1,669,657	+		PFLU_RS07510	0.65	-0.7
1,669,658	-		PFLU_RS07510	0.65	-0.2
1,669,658	-		PFLU_RS07510	0.65	-0.6
1,669,668	+		PFLU_RS07510	0.66	-1.1
1,669,669	-		PFLU_RS07510	0.66	+1.1
1,669,669	-		PFLU_RS07510	0.66	+0.8
1,669,669	-		PFLU_RS07510	0.66	-0.5
1,669,678	+		PFLU_RS07510	0.67	-0.4
1,669,678	+		PFLU_RS07510	0.67	+0.7
1,669,792	+		PFLU_RS07510	0.80	+0.5
1,669,794	+		PFLU_RS07510	0.80	+1.3
1,669,869	+		PFLU_RS07510	0.88	-0.4
1,669,869	+		PFLU_RS07510	0.88	-0.8
1,669,870	-		PFLU_RS07510	0.88	+0.8
1,669,890	+				-1.3
1,669,945	+				+0.5
1,669,945	+				-0.9
1,669,945	+				+0.2
1,669,945	+				-0.2
1,669,945	+				+0.8
1,669,945	+				+0.4
1,669,945	+				+0.5
1,669,945	+				+0.4
1,669,946	-				+0.1
1,669,946	-				+1.2
1,669,946	-				+0.8
1,669,946	-				+0.2
1,669,946	-				-1.1
1,669,946	-				+1.3
1,669,946	-				+0.3
1,669,946	-				-1.0
1,669,946	-				-0.1
1,669,946	-				-0.4
1,669,957	+				+0.4
1,669,963	-				-0.5
1,669,963	-				+0.2
1,670,029	+				-0.8
1,670,029	+				+0.7
1,670,029	+				-1.5
1,670,029	+				+0.3
1,670,029	+				-1.1
1,670,029	+				+0.1
1,670,030	-				-0.4
1,670,030	-				+0.7
1,670,030	-				+0.7
1,670,030	-				+0.8
1,670,043	+				-0.4
1,670,044	-				+0.8
1,670,044	-				+0.2
1,670,045	+				-0.6
1,670,045	+				-0.3
1,670,045	+				+0.6
1,670,045	+				+0.6
1,670,045	+				+0.8
1,670,045	+				+0.8
1,670,045	+				+0.4
1,670,045	+				+0.5
1,670,045	+				-2.2
1,670,045	+				-0.3
1,670,045	+				-0.5
1,670,045	+				+0.7
1,670,045	+				-0.2
1,670,045	+				+0.6
1,670,045	+				+0.6
1,670,045	+				+1.0
1,670,045	+				+0.0
1,670,045	+				-0.3
1,670,045	+				-3.0
1,670,045	+				+0.6
1,670,045	+				+0.3
1,670,045	+				+0.6
1,670,045	+				-0.4
1,670,045	+				+1.8
1,670,045	+				+1.0
1,670,045	+				-0.6
1,670,045	+				+1.7
1,670,046	-				+0.5
1,670,046	-				+0.5
1,670,046	-				-0.9
1,670,046	-				+0.8
1,670,046	-				-0.6
1,670,046	-				+0.3
1,670,046	-				-0.2
1,670,046	-				+1.5
1,670,046	-				+0.6
1,670,046	-				+0.2
1,670,046	-				-1.9
1,670,046	-				+0.2
1,670,046	-				+0.5
1,670,046	-				-0.1
1,670,046	-				+1.4
1,670,050	-				+0.7
1,670,050	-				+1.1
1,670,050	-				-0.9
1,670,050	-				+0.7
1,670,050	-				-0.1
1,670,096	-				+0.2
1,670,114	-				-1.1
1,670,114	-				+0.6
1,670,114	-				+0.0
1,670,114	-				+1.7
1,670,114	-				+0.8
1,670,114	-				+0.7
1,670,114	-				+1.2
1,670,114	-				-0.5
1,670,114	-				+1.3
1,670,114	-				+1.1
1,670,114	-				-1.3
1,670,114	-				+0.7
1,670,114	-				-0.1
1,670,114	-				-0.7
1,670,571	+				-0.3
1,670,571	+				-1.9
1,670,571	+				-0.1
1,670,585	-				-0.4
1,670,585	-				+0.2
1,670,585	-				-0.1
1,670,628	+				+0.2
1,670,687	+				-1.1
1,670,687	+				-1.1
1,670,687	+				+0.1
1,670,687	+				+0.3
1,670,688	-				-0.7
1,670,688	-				-0.8
1,670,688	-				-0.1
1,670,688	-				-1.5
1,670,688	-				-0.1
1,670,688	-				-1.1
1,670,774	+		PFLU_RS07515	0.17	-0.6
1,670,854	+		PFLU_RS07515	0.29	-2.0
1,670,854	+		PFLU_RS07515	0.29	+0.4
1,670,855	-		PFLU_RS07515	0.29	-1.0
1,670,855	-		PFLU_RS07515	0.29	-0.3
1,671,066	+		PFLU_RS07515	0.60	+1.2
1,671,066	+		PFLU_RS07515	0.60	-0.3
1,671,067	-		PFLU_RS07515	0.60	-1.8
1,671,084	+		PFLU_RS07515	0.62	+0.4
1,671,084	+		PFLU_RS07515	0.62	-0.1
1,671,084	+		PFLU_RS07515	0.62	+0.8
1,671,084	+		PFLU_RS07515	0.62	-1.0
1,671,085	-		PFLU_RS07515	0.63	+0.7
1,671,085	-		PFLU_RS07515	0.63	+1.4
1,671,085	-		PFLU_RS07515	0.63	+2.1
1,671,085	-		PFLU_RS07515	0.63	+1.0
1,671,382	+				+0.5
1,671,383	-				+0.1
1,671,383	-				+0.5
1,671,383	-				-0.6
1,671,388	+				+0.2
1,671,388	+				+0.2
1,671,388	+				-1.2
1,671,389	-				-0.0
1,671,389	-				-1.1
1,671,389	-				+0.4
1,671,389	-				-0.3
1,671,436	+				+0.2
1,671,436	+				+0.9
1,671,437	-				+0.8
1,671,437	-				-0.7
1,671,555	+		PFLU_RS07520	0.48	+0.1
1,671,555	+		PFLU_RS07520	0.48	+1.2
1,671,713	+				+0.6
1,671,713	+				-0.2
1,671,713	+				-0.1
1,671,713	+				+0.0
1,672,057	+		PFLU_RS07525	0.76	+0.3
1,672,065	+		PFLU_RS07525	0.78	-0.3
1,672,066	-		PFLU_RS07525	0.78	-0.7
1,672,150	+				+0.4
1,672,150	+				-0.4
1,672,150	+				+0.9
1,672,150	+				-0.8
1,672,150	+				+0.2
1,672,150	+				+1.2
1,672,150	+				+0.3
1,672,150	+				-0.1
1,672,150	+				+1.4
1,672,150	+				-0.7
1,672,150	+				-1.3
1,672,150	+				+0.7
1,672,150	+				-0.3
1,672,150	+				+1.4
1,672,150	+				+0.9
1,672,150	+				-0.7
1,672,150	+				+0.8
1,672,150	+				-0.4
1,672,150	+				+0.7
1,672,150	+				+0.3
1,672,150	+				+1.0
1,672,150	+				+0.8
1,672,150	+				+0.4
1,672,150	+				-0.2
1,672,150	+				+0.0
1,672,150	+				-0.5
1,672,150	+				-2.4
1,672,150	+				+0.0
1,672,150	+				+0.9
1,672,150	+				-0.5
1,672,150	+				-2.5
1,672,150	+				-0.1
1,672,150	+				-0.0
1,672,150	+				+3.4
1,672,150	+				+0.7
1,672,150	+				-0.9
1,672,150	+				-0.5
1,672,150	+				-0.3
1,672,151	-				+1.4
1,672,151	-				+0.5
1,672,151	-				-0.7
1,672,151	-				+0.0
1,672,151	-				-0.3
1,672,151	-				-0.2
1,672,151	-				-0.7
1,672,151	-				+0.6
1,672,151	-				-0.3
1,672,151	-				+0.2
1,672,151	-				+0.7
1,672,151	-				+2.0
1,672,151	-				-0.3
1,672,151	-				+0.4
1,672,151	-				+0.2
1,672,151	-				+0.2
1,672,151	-				-0.1
1,672,151	-				-0.7
1,672,151	-				+0.5
1,672,151	-				+0.2
1,672,151	-				+0.4
1,672,151	-				-1.0
1,672,151	-				-0.3
1,672,151	-				-0.8
1,672,151	-				-0.4
1,672,151	-				-1.2
1,672,151	-				-0.2
1,672,151	-				-0.1
1,672,151	-				-0.6
1,672,151	-				-0.2
1,672,151	-				+0.4
1,672,151	-				+0.4
1,672,151	-				+0.6
1,672,151	-				-0.2
1,672,151	-				-1.2
1,672,151	-				+1.3
1,672,151	-				+0.3
1,672,151	-				-0.3
1,672,151	-				-1.1
1,672,151	-				-1.2
1,672,151	-				-0.7
1,672,151	-				+1.4
1,672,151	-				+1.1
1,672,151	-				+0.3
1,672,161	-				+0.3
1,672,196	+				-0.2
1,672,196	+				+0.5
1,672,196	+				-2.1
1,672,196	+				-0.0
1,672,196	+				-1.0
1,672,196	+				+0.1
1,672,196	+				+0.3
1,672,196	+				+0.4
1,672,197	-				+0.7
1,672,197	-				-1.4
1,672,197	-				-1.4
1,672,197	-				-0.1
1,672,197	-				-2.0
1,672,197	-				-1.7
1,672,197	-				+0.4
1,672,197	-				+1.8
1,672,197	-				-0.5
1,672,197	-				-1.0
1,672,197	-				+0.1
1,672,197	-				-0.2
1,672,231	+				+0.7
1,672,240	+				-0.9
1,672,240	+				+0.7
1,672,241	-				-1.0
1,672,274	-				-0.3
1,672,284	+				+0.7
1,672,285	-				+0.3
1,672,285	-				+0.6
1,672,285	-				+0.7
1,672,285	-				+0.6
1,672,293	+				-0.2
1,672,293	+				-0.4
1,672,293	+				+0.2
1,672,293	+				-1.1
1,672,294	-				-0.7
1,672,294	-				+0.2
1,672,294	-				+0.8