Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06670

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
1,489,431	-				-0.3
1,489,455	+				+0.5
1,489,455	+				+0.0
1,489,455	+				+0.2
1,489,456	-				+0.5
1,489,456	-				+0.4
1,489,471	+				-0.1
1,489,472	-				-0.2
1,489,474	+				-0.0
1,489,474	+				+0.9
1,489,474	+				+0.5
1,489,474	+				-2.0
1,489,474	+				-0.2
1,489,474	+				-1.1
1,489,474	+				+0.1
1,489,474	+				+0.2
1,489,474	+				+1.6
1,489,474	+				-0.2
1,489,474	+				+0.0
1,489,474	+				+0.3
1,489,474	+				+0.5
1,489,474	+				-0.6
1,489,474	+				+0.9
1,489,474	+				+0.2
1,489,474	+				-1.2
1,489,474	+				+0.7
1,489,474	+				+0.2
1,489,474	+				+0.6
1,489,474	+				+0.3
1,489,474	+				-0.4
1,489,474	+				-0.4
1,489,475	-				+1.0
1,489,475	-				+0.1
1,489,475	-				-2.0
1,489,475	-				+0.7
1,489,475	-				-0.0
1,489,475	-				+0.2
1,489,475	-				-0.1
1,489,475	-				-0.2
1,489,475	-				-0.2
1,489,516	+				-2.1
1,489,517	-				+1.0
1,489,517	-				+0.3
1,489,517	-				-0.1
1,489,527	+				+0.6
1,489,528	-				-0.7
1,489,528	-				+0.2
1,489,528	-				-0.9
1,489,528	-				-0.6
1,489,542	+				+0.9
1,489,542	+				-0.7
1,489,543	-				-0.0
1,489,543	-				+0.8
1,489,543	-				+0.1
1,489,573	+				+0.4
1,489,573	+				+0.4
1,489,573	+				+0.8
1,489,573	+				-0.5
1,489,573	+				-1.3
1,489,573	+				+1.3
1,489,573	+				-0.6
1,489,573	+				-1.1
1,489,574	-				+1.1
1,489,574	-				+0.8
1,489,574	-				-0.6
1,489,574	-				-0.3
1,489,574	-				-0.2
1,489,574	-				+0.7
1,489,574	-				-1.1
1,489,574	-				+1.4
1,489,574	-				+0.3
1,489,574	-				-1.9
1,489,585	+				-0.6
1,489,585	+				-0.1
1,489,586	-				+0.0
1,489,587	+				-0.2
1,489,587	+				+0.1
1,489,587	+				-0.4
1,489,587	+				-0.6
1,489,587	+				-1.2
1,489,587	+				-0.1
1,489,587	+				-0.9
1,489,588	-				-0.6
1,489,588	-				+0.2
1,489,588	-				-0.1
1,489,588	-				-0.2
1,489,588	-				+0.6
1,489,667	+				+0.9
1,489,667	+				-0.8
1,489,668	-				+0.2
1,489,668	-				+0.3
1,489,668	-				-0.2
1,489,757	-		PFLU_RS06665	0.25	-0.1
1,489,757	-		PFLU_RS06665	0.25	+0.4
1,489,767	-		PFLU_RS06665	0.28	+1.6
1,489,767	-		PFLU_RS06665	0.28	+0.3
1,489,793	-		PFLU_RS06665	0.35	-0.0
1,489,793	-		PFLU_RS06665	0.35	+0.1
1,489,793	-		PFLU_RS06665	0.35	-0.3
1,489,793	-		PFLU_RS06665	0.35	-0.9
1,489,793	-		PFLU_RS06665	0.35	-0.8
1,489,811	+		PFLU_RS06665	0.40	+0.3
1,490,053	+				+0.4
1,490,053	+				+0.4
1,490,066	+		PFLU_RS30450	0.15	+0.3
1,490,067	-		PFLU_RS30450	0.16	-1.1
1,490,086	+		PFLU_RS30450	0.24	+0.4
1,490,087	-		PFLU_RS30450	0.24	-2.3
1,490,087	-		PFLU_RS30450	0.24	+0.6
1,490,087	-		PFLU_RS30450	0.24	+2.3
1,490,124	+		PFLU_RS30450	0.40	+0.9
1,490,125	-		PFLU_RS30450	0.40	-1.5
1,490,125	-		PFLU_RS30450	0.40	+1.0
1,490,125	-		PFLU_RS30450	0.40	-1.5
1,490,126	+		PFLU_RS30450	0.41	-0.1
1,490,126	+		PFLU_RS30450	0.41	+0.4
1,490,127	-		PFLU_RS30450	0.41	+0.3
1,490,127	-		PFLU_RS30450	0.41	-1.1
1,490,173	-		PFLU_RS30450	0.61	+0.4
1,490,182	-		PFLU_RS30450	0.65	-0.6
1,490,192	-		PFLU_RS30450	0.69	+1.3
1,490,216	+		PFLU_RS30450	0.79	+0.3
1,490,216	+		PFLU_RS30450	0.79	+0.6
1,490,216	+		PFLU_RS30450	0.79	-1.2
1,490,216	+		PFLU_RS30450	0.79	-0.1
1,490,216	+		PFLU_RS30450	0.79	-0.2
1,490,216	+		PFLU_RS30450	0.79	-0.6
1,490,216	+		PFLU_RS30450	0.79	+0.1
1,490,216	+		PFLU_RS30450	0.79	-0.6
1,490,217	-		PFLU_RS30450	0.80	-0.7
1,490,217	-		PFLU_RS30450	0.80	-0.4
1,490,217	-		PFLU_RS30450	0.80	+0.2
1,490,217	-		PFLU_RS30450	0.80	-0.8
1,490,217	-		PFLU_RS30450	0.80	+0.9
1,490,217	-		PFLU_RS30450	0.80	-2.3
1,490,217	-		PFLU_RS30450	0.80	-1.2
1,490,217	-		PFLU_RS30450	0.80	+0.1
1,490,217	-		PFLU_RS30450	0.80	+1.9
1,490,217	-		PFLU_RS30450	0.80	-0.1
1,490,217	-		PFLU_RS30450	0.80	-1.7
1,490,217	-		PFLU_RS30450	0.80	-0.9
1,490,262	+				-0.1
1,490,262	+				-0.8
1,490,263	-				+0.9
1,490,263	-				+1.6
1,490,263	-				+0.3
1,490,263	-				+0.0
1,490,268	+				+0.9
1,490,268	+				+0.9
1,490,268	+				+0.0
1,490,268	+				-1.9
1,490,268	+				-0.9
1,490,269	-				+0.4
1,490,269	-				-0.1
1,490,269	-				-0.0
1,490,269	-				+1.1
1,490,269	-				-0.0
1,490,269	-				-0.4
1,490,461	+		PFLU_RS06670	0.13	-0.3
1,490,461	+		PFLU_RS06670	0.13	+0.3
1,490,461	+		PFLU_RS06670	0.13	+1.7
1,490,462	-		PFLU_RS06670	0.13	+0.5
1,490,462	-		PFLU_RS06670	0.13	-0.4
1,490,462	-		PFLU_RS06670	0.13	+0.4
1,490,462	-		PFLU_RS06670	0.13	+0.0
1,490,632	+		PFLU_RS06670	0.26	+0.6
1,490,633	-		PFLU_RS06670	0.26	+0.7
1,490,633	-		PFLU_RS06670	0.26	-1.7
1,490,839	+		PFLU_RS06670	0.41	+0.4
1,490,839	+		PFLU_RS06670	0.41	-0.7
1,490,839	+		PFLU_RS06670	0.41	+0.4
1,490,839	+		PFLU_RS06670	0.41	-0.4
1,490,839	+		PFLU_RS06670	0.41	-0.2
1,490,839	+		PFLU_RS06670	0.41	-0.3
1,490,839	+		PFLU_RS06670	0.41	-0.5
1,490,839	+		PFLU_RS06670	0.41	+0.2
1,490,839	+		PFLU_RS06670	0.41	-0.3
1,490,839	+		PFLU_RS06670	0.41	+0.6
1,490,839	+		PFLU_RS06670	0.41	+0.1
1,490,839	+		PFLU_RS06670	0.41	-0.1
1,490,839	+		PFLU_RS06670	0.41	-0.3
1,490,839	+		PFLU_RS06670	0.41	+0.9
1,490,839	+		PFLU_RS06670	0.41	-0.4
1,490,839	+		PFLU_RS06670	0.41	+0.2
1,490,839	+		PFLU_RS06670	0.41	+0.4
1,490,839	+		PFLU_RS06670	0.41	+0.5
1,490,839	+		PFLU_RS06670	0.41	+1.0
1,490,840	-		PFLU_RS06670	0.41	-0.4
1,490,840	-		PFLU_RS06670	0.41	-0.4
1,490,840	-		PFLU_RS06670	0.41	-0.3
1,490,840	-		PFLU_RS06670	0.41	+0.1
1,490,840	-		PFLU_RS06670	0.41	+1.0
1,490,840	-		PFLU_RS06670	0.41	+0.2
1,490,840	-		PFLU_RS06670	0.41	-0.2
1,490,840	-		PFLU_RS06670	0.41	-3.3
1,490,840	-		PFLU_RS06670	0.41	+0.8
1,490,840	-		PFLU_RS06670	0.41	-0.1
1,490,840	-		PFLU_RS06670	0.41	+0.1
1,490,840	-		PFLU_RS06670	0.41	-0.7
1,490,840	-		PFLU_RS06670	0.41	+0.1
1,490,840	-		PFLU_RS06670	0.41	-0.9
1,490,840	-		PFLU_RS06670	0.41	-0.9
1,490,840	-		PFLU_RS06670	0.41	-1.0
1,490,840	-		PFLU_RS06670	0.41	+0.9
1,490,840	-		PFLU_RS06670	0.41	-1.4
1,490,840	-		PFLU_RS06670	0.41	-0.3
1,490,841	+		PFLU_RS06670	0.41	-0.8
1,490,841	+		PFLU_RS06670	0.41	-0.7
1,490,980	+		PFLU_RS06670	0.52	-0.2
1,490,980	+		PFLU_RS06670	0.52	-0.2
1,490,980	+		PFLU_RS06670	0.52	-2.2
1,490,980	+		PFLU_RS06670	0.52	-0.7
1,490,980	+		PFLU_RS06670	0.52	+0.1
1,490,980	+		PFLU_RS06670	0.52	+0.4
1,490,981	-		PFLU_RS06670	0.52	+0.6
1,490,981	-		PFLU_RS06670	0.52	+0.1
1,490,981	-		PFLU_RS06670	0.52	-0.6
1,490,981	-		PFLU_RS06670	0.52	+0.0
1,490,981	-		PFLU_RS06670	0.52	+1.1
1,490,981	-		PFLU_RS06670	0.52	+0.1
1,491,019	+		PFLU_RS06670	0.55	+0.1
1,491,020	-		PFLU_RS06670	0.55	+0.5
1,491,268	+		PFLU_RS06670	0.73	+0.0
1,491,268	+		PFLU_RS06670	0.73	+0.9
1,491,268	+		PFLU_RS06670	0.73	-1.7
1,491,268	+		PFLU_RS06670	0.73	+0.3
1,491,269	-		PFLU_RS06670	0.73	-1.3
1,491,269	-		PFLU_RS06670	0.73	+1.1
1,491,269	-		PFLU_RS06670	0.73	+0.4
1,491,271	-		PFLU_RS06670	0.73	+0.5
1,491,271	-		PFLU_RS06670	0.73	-0.6
1,491,271	-		PFLU_RS06670	0.73	+0.0
1,491,271	-		PFLU_RS06670	0.73	-0.3
1,491,271	-		PFLU_RS06670	0.73	+0.9
1,491,277	+		PFLU_RS06670	0.74	+1.4
1,491,278	-		PFLU_RS06670	0.74	+1.7
1,491,278	-		PFLU_RS06670	0.74	-1.7
1,491,278	-		PFLU_RS06670	0.74	+0.6
1,491,278	-		PFLU_RS06670	0.74	-0.8
1,491,278	-		PFLU_RS06670	0.74	+1.4
1,491,278	-		PFLU_RS06670	0.74	-1.5
1,491,278	-		PFLU_RS06670	0.74	-1.9
1,491,278	-		PFLU_RS06670	0.74	-0.9
1,491,278	-		PFLU_RS06670	0.74	-0.6
1,491,278	-		PFLU_RS06670	0.74	+0.8
1,491,289	+		PFLU_RS06670	0.75	-0.3
1,491,289	+		PFLU_RS06670	0.75	+0.6
1,491,289	+		PFLU_RS06670	0.75	-0.4
1,491,290	-		PFLU_RS06670	0.75	-0.9
1,491,361	+		PFLU_RS06670	0.80	-1.7
1,491,361	+		PFLU_RS06670	0.80	+0.0
1,491,361	+		PFLU_RS06670	0.80	+0.1
1,491,361	+		PFLU_RS06670	0.80	-1.2
1,491,361	+		PFLU_RS06670	0.80	-0.3
1,491,362	-		PFLU_RS06670	0.80	+0.5
1,491,362	-		PFLU_RS06670	0.80	+0.2
1,491,362	-		PFLU_RS06670	0.80	-0.4
1,491,395	+		PFLU_RS06670	0.82	+0.9
1,491,395	+		PFLU_RS06670	0.82	-1.7
1,491,396	-		PFLU_RS06670	0.83	+1.1
1,491,396	-		PFLU_RS06670	0.83	-0.3
1,491,396	-		PFLU_RS06670	0.83	-0.5
1,491,433	+		PFLU_RS06670	0.85	-0.0
1,491,433	+		PFLU_RS06670	0.85	+0.8
1,491,433	+		PFLU_RS06670	0.85	+1.6
1,491,433	+		PFLU_RS06670	0.85	-0.6
1,491,433	+		PFLU_RS06670	0.85	-0.7
1,491,433	+		PFLU_RS06670	0.85	+0.2
1,491,433	+		PFLU_RS06670	0.85	-0.8
1,491,433	+		PFLU_RS06670	0.85	+0.3
1,491,433	+		PFLU_RS06670	0.85	+0.0
1,491,433	+		PFLU_RS06670	0.85	-0.3
1,491,433	+		PFLU_RS06670	0.85	+0.9
1,491,433	+		PFLU_RS06670	0.85	-1.0
1,491,434	-		PFLU_RS06670	0.85	-0.2
1,491,434	-		PFLU_RS06670	0.85	-0.5
1,491,434	-		PFLU_RS06670	0.85	-0.7
1,491,434	-		PFLU_RS06670	0.85	-0.7
1,491,434	-		PFLU_RS06670	0.85	-0.9
1,491,434	-		PFLU_RS06670	0.85	+1.2
1,491,434	-		PFLU_RS06670	0.85	-0.7
1,491,434	-		PFLU_RS06670	0.85	-1.8
1,491,434	-		PFLU_RS06670	0.85	-1.0
1,491,434	-		PFLU_RS06670	0.85	-0.9
1,491,434	-		PFLU_RS06670	0.85	+0.2
1,491,434	-		PFLU_RS06670	0.85	+1.0
1,491,466	+		PFLU_RS06670	0.88	+0.4
1,491,466	+		PFLU_RS06670	0.88	+0.0
1,491,466	+		PFLU_RS06670	0.88	-2.1
1,491,466	+		PFLU_RS06670	0.88	-0.3
1,491,466	+		PFLU_RS06670	0.88	+0.3
1,491,466	+		PFLU_RS06670	0.88	-0.9
1,491,466	+		PFLU_RS06670	0.88	-2.1
1,491,467	-		PFLU_RS06670	0.88	+0.5
1,491,467	-		PFLU_RS06670	0.88	+0.5
1,491,467	-		PFLU_RS06670	0.88	+0.6
1,491,467	-		PFLU_RS06670	0.88	-0.0
1,491,467	-		PFLU_RS06670	0.88	-0.2
1,491,467	-		PFLU_RS06670	0.88	+0.3
1,491,467	-		PFLU_RS06670	0.88	-0.7
1,491,467	-		PFLU_RS06670	0.88	-0.2
1,491,496	+				-0.4
1,491,496	+				-0.4
1,491,496	+				-0.2
1,491,496	+				+0.2
1,491,497	-				+0.3
1,491,497	-				+3.2
1,491,497	-				+0.4
1,491,497	-				+0.7
1,491,497	-				-1.4
1,491,497	-				-1.1
1,491,497	-				-0.4
1,491,497	-				+0.1
1,491,497	-				+0.3
1,491,744	+				+0.0
1,491,744	+				+0.5
1,491,744	+				-2.4
1,491,744	+				-0.0
1,491,744	+				+0.0
1,491,744	+				-1.6
1,491,745	-				-1.4
1,491,745	-				-0.9
1,491,745	-				-0.2
1,491,745	-				-0.3
1,491,745	-				+0.1
1,491,745	-				+0.7
1,491,745	-				-0.5
1,491,748	+				-0.3
1,491,748	+				+0.4
1,491,748	+				+1.9
1,491,748	+				+0.7
1,491,748	+				-1.4
1,491,748	+				+0.1
1,491,748	+				+0.5
1,491,748	+				+1.6
1,491,748	+				-0.0
1,491,748	+				-0.1
1,491,748	+				+0.7
1,491,749	-				+0.2
1,491,749	-				+0.2
1,491,749	-				+0.9
1,491,749	-				-2.1
1,491,749	-				-0.0
1,491,749	-				+1.1
1,491,749	-				+1.0
1,491,749	-				+1.6
1,491,749	-				+0.4
1,491,749	-				+0.0
1,491,749	-				-0.1
1,491,749	-				+0.4
1,491,749	-				-0.4
1,491,749	-				+0.7
1,491,749	-				-0.8
1,491,751	+				-0.1
1,491,751	+				-0.4
1,492,147	+		PFLU_RS06675	0.14	-0.4
1,492,192	+		PFLU_RS06675	0.16	-1.2
1,492,192	+		PFLU_RS06675	0.16	-0.4
1,492,192	+		PFLU_RS06675	0.16	-1.0
1,492,193	-		PFLU_RS06675	0.16	-1.1
1,492,193	-		PFLU_RS06675	0.16	-0.4
1,492,193	-		PFLU_RS06675	0.16	+0.6
1,492,193	-		PFLU_RS06675	0.16	-0.1
1,492,363	+		PFLU_RS06675	0.22	-0.2
1,492,363	+		PFLU_RS06675	0.22	-0.6
1,492,363	+		PFLU_RS06675	0.22	-0.8
1,492,363	+		PFLU_RS06675	0.22	+0.8
1,492,363	+		PFLU_RS06675	0.22	+0.0
1,492,363	+		PFLU_RS06675	0.22	-0.7
1,492,363	+		PFLU_RS06675	0.22	+0.7
1,492,363	+		PFLU_RS06675	0.22	+0.0
1,492,363	+		PFLU_RS06675	0.22	-0.3
1,492,364	-		PFLU_RS06675	0.22	+0.3
1,492,364	-		PFLU_RS06675	0.22	+0.6
1,492,364	-		PFLU_RS06675	0.22	+0.9
1,492,364	-		PFLU_RS06675	0.22	+0.3
1,492,364	-		PFLU_RS06675	0.22	+0.5
1,492,498	+		PFLU_RS06675	0.26	+0.8
1,492,498	+		PFLU_RS06675	0.26	+0.9
1,492,499	-		PFLU_RS06675	0.26	-0.2
1,492,499	-		PFLU_RS06675	0.26	+0.3
1,492,499	-		PFLU_RS06675	0.26	-0.8
1,492,499	-		PFLU_RS06675	0.26	+0.6
1,492,499	-		PFLU_RS06675	0.26	-0.3
1,492,499	-		PFLU_RS06675	0.26	+0.4