Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_12215 and OH686_12220 are separated by 74 nucleotides OH686_12220 and OH686_12225 are separated by 6 nucleotides OH686_12225 and OH686_12230 overlap by 18 nucleotides
OH686_12215: OH686_12215 - DNA polymerase I, at 2,581,865 to 2,584,636
_12215
OH686_12220: OH686_12220 - hypothetical protein, at 2,584,711 to 2,584,995
_12220
OH686_12225: OH686_12225 - homoserine kinase, at 2,585,002 to 2,585,952
_12225
OH686_12230: OH686_12230 - hypothetical protein, at 2,585,935 to 2,586,273
_12230
Position (kb)
2584
2585 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2583.999 kb on + strand, within OH686_12215 at 2584.637 kb on - strand at 2584.637 kb on - strand at 2584.637 kb on - strand at 2584.637 kb on - strand at 2584.637 kb on - strand at 2584.637 kb on - strand at 2584.670 kb on + strand at 2584.671 kb on - strand at 2584.671 kb on - strand at 2584.671 kb on - strand at 2584.707 kb on + strand at 2584.864 kb on + strand, within OH686_12220 at 2584.864 kb on + strand, within OH686_12220 at 2584.864 kb on + strand, within OH686_12220 at 2584.865 kb on - strand, within OH686_12220 at 2584.865 kb on - strand, within OH686_12220 at 2584.865 kb on - strand, within OH686_12220 at 2584.900 kb on + strand, within OH686_12220 at 2584.900 kb on + strand, within OH686_12220 at 2584.900 kb on + strand, within OH686_12220 at 2584.900 kb on + strand, within OH686_12220 at 2584.900 kb on + strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2584.901 kb on - strand, within OH686_12220 at 2585.056 kb on + strand at 2585.239 kb on + strand, within OH686_12225 at 2585.239 kb on + strand, within OH686_12225 at 2585.239 kb on + strand, within OH686_12225 at 2585.240 kb on - strand, within OH686_12225 at 2585.240 kb on - strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.632 kb on + strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.633 kb on - strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.659 kb on + strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.660 kb on - strand, within OH686_12225 at 2585.747 kb on - strand, within OH686_12225 at 2585.756 kb on + strand, within OH686_12225 at 2585.757 kb on - strand, within OH686_12225 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.969 kb on + strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230 at 2585.970 kb on - strand, within OH686_12230
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,583,999 + OH686_12215 0.77 -0.7 2,584,637 - +1.0 2,584,637 - -0.3 2,584,637 - -1.3 2,584,637 - +0.4 2,584,637 - -1.3 2,584,637 - -0.2 2,584,670 + +0.3 2,584,671 - -0.3 2,584,671 - -0.2 2,584,671 - -0.0 2,584,707 + +0.7 2,584,864 + OH686_12220 0.54 +0.4 2,584,864 + OH686_12220 0.54 +0.2 2,584,864 + OH686_12220 0.54 -0.3 2,584,865 - OH686_12220 0.54 -1.1 2,584,865 - OH686_12220 0.54 +0.1 2,584,865 - OH686_12220 0.54 +1.2 2,584,900 + OH686_12220 0.66 -0.5 2,584,900 + OH686_12220 0.66 +0.5 2,584,900 + OH686_12220 0.66 -0.2 2,584,900 + OH686_12220 0.66 +0.1 2,584,900 + OH686_12220 0.66 +0.9 2,584,901 - OH686_12220 0.67 +0.9 2,584,901 - OH686_12220 0.67 +0.9 2,584,901 - OH686_12220 0.67 +0.2 2,584,901 - OH686_12220 0.67 +0.3 2,584,901 - OH686_12220 0.67 +2.1 2,584,901 - OH686_12220 0.67 +0.5 2,585,056 + -1.0 2,585,239 + OH686_12225 0.25 +0.7 2,585,239 + OH686_12225 0.25 -0.1 2,585,239 + OH686_12225 0.25 -0.2 2,585,240 - OH686_12225 0.25 -0.7 2,585,240 - OH686_12225 0.25 -0.0 2,585,632 + OH686_12225 0.66 -0.1 2,585,632 + OH686_12225 0.66 +0.5 2,585,632 + OH686_12225 0.66 -0.4 2,585,632 + OH686_12225 0.66 -0.3 2,585,632 + OH686_12225 0.66 +0.4 2,585,632 + OH686_12225 0.66 -0.3 2,585,632 + OH686_12225 0.66 +0.6 2,585,632 + OH686_12225 0.66 +0.5 2,585,633 - OH686_12225 0.66 +0.3 2,585,633 - OH686_12225 0.66 -0.7 2,585,633 - OH686_12225 0.66 -0.4 2,585,633 - OH686_12225 0.66 +0.1 2,585,633 - OH686_12225 0.66 +0.9 2,585,633 - OH686_12225 0.66 +0.9 2,585,633 - OH686_12225 0.66 +1.1 2,585,633 - OH686_12225 0.66 +0.1 2,585,633 - OH686_12225 0.66 -0.6 2,585,633 - OH686_12225 0.66 +0.2 2,585,633 - OH686_12225 0.66 -0.7 2,585,659 + OH686_12225 0.69 +1.1 2,585,659 + OH686_12225 0.69 +0.5 2,585,659 + OH686_12225 0.69 +0.0 2,585,659 + OH686_12225 0.69 +0.9 2,585,659 + OH686_12225 0.69 +0.5 2,585,659 + OH686_12225 0.69 -0.5 2,585,659 + OH686_12225 0.69 +1.0 2,585,659 + OH686_12225 0.69 +0.4 2,585,659 + OH686_12225 0.69 -0.4 2,585,660 - OH686_12225 0.69 -0.3 2,585,660 - OH686_12225 0.69 -0.2 2,585,660 - OH686_12225 0.69 -0.9 2,585,660 - OH686_12225 0.69 +1.2 2,585,660 - OH686_12225 0.69 +0.9 2,585,660 - OH686_12225 0.69 +0.7 2,585,660 - OH686_12225 0.69 -0.4 2,585,660 - OH686_12225 0.69 -0.1 2,585,747 - OH686_12225 0.78 +0.3 2,585,756 + OH686_12225 0.79 -0.2 2,585,757 - OH686_12225 0.79 +0.3 2,585,969 + OH686_12230 0.10 -0.0 2,585,969 + OH686_12230 0.10 -0.1 2,585,969 + OH686_12230 0.10 -1.4 2,585,969 + OH686_12230 0.10 -0.1 2,585,969 + OH686_12230 0.10 -1.8 2,585,969 + OH686_12230 0.10 +0.5 2,585,969 + OH686_12230 0.10 +1.7 2,585,969 + OH686_12230 0.10 -0.4 2,585,969 + OH686_12230 0.10 -0.4 2,585,969 + OH686_12230 0.10 -0.3 2,585,970 - OH686_12230 0.10 -0.3 2,585,970 - OH686_12230 0.10 -0.2 2,585,970 - OH686_12230 0.10 -0.7 2,585,970 - OH686_12230 0.10 -0.2 2,585,970 - OH686_12230 0.10 +0.1 2,585,970 - OH686_12230 0.10 -0.9 2,585,970 - OH686_12230 0.10 +0.9
Or see this region's nucleotide sequence