Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4113 and Echvi_4114 are separated by 2 nucleotides Echvi_4114 and Echvi_4115 are separated by 7 nucleotides Echvi_4115 and Echvi_4116 are separated by 173 nucleotides Echvi_4116 and Echvi_4117 are separated by 37 nucleotides
Echvi_4113: Echvi_4113 - hypothetical protein, at 4,926,970 to 4,927,439
_4113
Echvi_4114: Echvi_4114 - hypothetical protein, at 4,927,442 to 4,927,678
_4114
Echvi_4115: Echvi_4115 - Nitrogen regulatory protein PII, at 4,927,686 to 4,928,027
_4115
Echvi_4116: Echvi_4116 - RND family efflux transporter, MFP subunit, at 4,928,201 to 4,929,433
_4116
Echvi_4117: Echvi_4117 - heavy metal efflux pump (cobalt-zinc-cadmium), at 4,929,471 to 4,933,916
_4117
Position (kb)
4928
4929
4930 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4927.276 kb on + strand, within Echvi_4113 at 4927.344 kb on + strand, within Echvi_4113 at 4927.345 kb on - strand, within Echvi_4113 at 4927.350 kb on - strand, within Echvi_4113 at 4927.361 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.392 kb on - strand, within Echvi_4113 at 4927.440 kb on + strand at 4927.470 kb on + strand, within Echvi_4114 at 4927.470 kb on + strand, within Echvi_4114 at 4927.487 kb on + strand, within Echvi_4114 at 4927.489 kb on + strand, within Echvi_4114 at 4927.520 kb on + strand, within Echvi_4114 at 4927.607 kb on + strand, within Echvi_4114 at 4927.607 kb on + strand, within Echvi_4114 at 4927.611 kb on + strand, within Echvi_4114 at 4927.653 kb on + strand, within Echvi_4114 at 4927.654 kb on - strand, within Echvi_4114 at 4927.658 kb on + strand at 4927.659 kb on - strand at 4927.659 kb on - strand at 4927.679 kb on - strand at 4927.706 kb on + strand at 4927.752 kb on + strand, within Echvi_4115 at 4927.753 kb on - strand, within Echvi_4115 at 4927.756 kb on + strand, within Echvi_4115 at 4927.756 kb on + strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.760 kb on + strand, within Echvi_4115 at 4927.793 kb on + strand, within Echvi_4115 at 4927.794 kb on - strand, within Echvi_4115 at 4927.815 kb on + strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4928.032 kb on - strand at 4928.033 kb on + strand at 4928.039 kb on + strand at 4928.039 kb on + strand at 4928.093 kb on - strand at 4928.093 kb on - strand at 4928.094 kb on + strand at 4928.098 kb on + strand at 4928.099 kb on - strand at 4928.113 kb on + strand at 4928.114 kb on - strand at 4928.153 kb on + strand at 4928.153 kb on + strand at 4928.181 kb on - strand at 4928.195 kb on + strand at 4928.195 kb on + strand at 4928.195 kb on + strand at 4928.210 kb on - strand at 4928.210 kb on - strand at 4928.247 kb on + strand at 4928.248 kb on - strand at 4928.250 kb on + strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.340 kb on - strand, within Echvi_4116 at 4928.397 kb on - strand, within Echvi_4116 at 4928.404 kb on + strand, within Echvi_4116 at 4928.405 kb on - strand, within Echvi_4116 at 4928.490 kb on + strand, within Echvi_4116 at 4928.490 kb on + strand, within Echvi_4116 at 4928.504 kb on + strand, within Echvi_4116 at 4928.518 kb on + strand, within Echvi_4116 at 4928.519 kb on - strand, within Echvi_4116 at 4928.538 kb on - strand, within Echvi_4116 at 4928.538 kb on - strand, within Echvi_4116 at 4928.584 kb on - strand, within Echvi_4116 at 4928.597 kb on + strand, within Echvi_4116 at 4928.598 kb on - strand, within Echvi_4116 at 4928.651 kb on - strand, within Echvi_4116 at 4928.676 kb on - strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.696 kb on - strand, within Echvi_4116 at 4928.762 kb on + strand, within Echvi_4116 at 4928.776 kb on - strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.802 kb on - strand, within Echvi_4116 at 4928.802 kb on - strand, within Echvi_4116 at 4928.805 kb on + strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.922 kb on + strand, within Echvi_4116 at 4928.930 kb on - strand, within Echvi_4116 at 4928.952 kb on + strand, within Echvi_4116 at 4928.953 kb on - strand, within Echvi_4116 at 4928.953 kb on - strand, within Echvi_4116 at 4928.988 kb on + strand, within Echvi_4116 at 4928.993 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.026 kb on + strand, within Echvi_4116 at 4929.073 kb on + strand, within Echvi_4116 at 4929.095 kb on + strand, within Echvi_4116 at 4929.095 kb on + strand, within Echvi_4116 at 4929.096 kb on - strand, within Echvi_4116 at 4929.110 kb on + strand, within Echvi_4116 at 4929.110 kb on + strand, within Echvi_4116 at 4929.115 kb on + strand, within Echvi_4116 at 4929.127 kb on + strand, within Echvi_4116 at 4929.127 kb on + strand, within Echvi_4116 at 4929.159 kb on - strand, within Echvi_4116 at 4929.245 kb on - strand, within Echvi_4116 at 4929.254 kb on + strand, within Echvi_4116 at 4929.254 kb on + strand, within Echvi_4116 at 4929.260 kb on + strand, within Echvi_4116 at 4929.289 kb on + strand, within Echvi_4116 at 4929.383 kb on + strand at 4929.415 kb on - strand at 4929.415 kb on - strand at 4929.417 kb on - strand at 4929.440 kb on + strand at 4929.441 kb on - strand at 4929.448 kb on + strand at 4929.448 kb on + strand at 4929.448 kb on + strand at 4929.449 kb on - strand at 4929.451 kb on - strand at 4929.486 kb on + strand at 4929.487 kb on - strand at 4929.487 kb on - strand at 4929.490 kb on + strand at 4929.490 kb on + strand at 4929.490 kb on + strand at 4929.493 kb on + strand at 4929.520 kb on + strand at 4929.593 kb on - strand at 4929.598 kb on - strand at 4929.673 kb on + strand at 4929.673 kb on + strand at 4929.674 kb on - strand at 4929.822 kb on + strand at 4929.833 kb on + strand at 4929.833 kb on + strand at 4929.833 kb on + strand at 4929.834 kb on - strand at 4929.836 kb on + strand at 4929.836 kb on + strand at 4929.836 kb on + strand at 4929.837 kb on - strand at 4929.840 kb on + strand at 4929.841 kb on - strand at 4929.854 kb on - strand at 4929.873 kb on + strand at 4929.873 kb on + strand at 4929.874 kb on - strand at 4929.874 kb on - strand at 4929.889 kb on + strand at 4929.889 kb on + strand at 4929.890 kb on - strand at 4929.938 kb on + strand, within Echvi_4117 at 4929.975 kb on + strand, within Echvi_4117 at 4929.976 kb on - strand, within Echvi_4117 at 4930.008 kb on - strand, within Echvi_4117 at 4930.010 kb on - strand, within Echvi_4117 at 4930.051 kb on - strand, within Echvi_4117 at 4930.064 kb on + strand, within Echvi_4117 at 4930.064 kb on + strand, within Echvi_4117 at 4930.087 kb on - strand, within Echvi_4117 at 4930.095 kb on + strand, within Echvi_4117 at 4930.108 kb on + strand, within Echvi_4117 at 4930.187 kb on + strand, within Echvi_4117 at 4930.188 kb on - strand, within Echvi_4117 at 4930.224 kb on + strand, within Echvi_4117 at 4930.225 kb on - strand, within Echvi_4117 at 4930.226 kb on + strand, within Echvi_4117 at 4930.226 kb on + strand, within Echvi_4117 at 4930.226 kb on + strand, within Echvi_4117 at 4930.227 kb on - strand, within Echvi_4117 at 4930.230 kb on + strand, within Echvi_4117 at 4930.231 kb on - strand, within Echvi_4117 at 4930.231 kb on - strand, within Echvi_4117 at 4930.233 kb on - strand, within Echvi_4117 at 4930.233 kb on - strand, within Echvi_4117 at 4930.236 kb on + strand, within Echvi_4117 at 4930.255 kb on + strand, within Echvi_4117 at 4930.282 kb on + strand, within Echvi_4117 at 4930.282 kb on + strand, within Echvi_4117 at 4930.282 kb on + strand, within Echvi_4117 at 4930.283 kb on - strand, within Echvi_4117 at 4930.379 kb on + strand, within Echvi_4117 at 4930.386 kb on - strand, within Echvi_4117 at 4930.428 kb on + strand, within Echvi_4117 at 4930.428 kb on + strand, within Echvi_4117
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,927,276 + Echvi_4113 0.65 -0.5 4,927,344 + Echvi_4113 0.80 -0.7 4,927,345 - Echvi_4113 0.80 -1.6 4,927,350 - Echvi_4113 0.81 +0.4 4,927,361 + Echvi_4113 0.83 +0.6 4,927,391 + Echvi_4113 0.90 -0.2 4,927,391 + Echvi_4113 0.90 +0.6 4,927,391 + Echvi_4113 0.90 -0.1 4,927,392 - Echvi_4113 0.90 -0.2 4,927,440 + +0.1 4,927,470 + Echvi_4114 0.12 +0.6 4,927,470 + Echvi_4114 0.12 -0.3 4,927,487 + Echvi_4114 0.19 -2.9 4,927,489 + Echvi_4114 0.20 +0.3 4,927,520 + Echvi_4114 0.33 -1.2 4,927,607 + Echvi_4114 0.70 -0.7 4,927,607 + Echvi_4114 0.70 -0.3 4,927,611 + Echvi_4114 0.71 +1.1 4,927,653 + Echvi_4114 0.89 +0.2 4,927,654 - Echvi_4114 0.89 +0.0 4,927,658 + -0.2 4,927,659 - +0.5 4,927,659 - -0.5 4,927,679 - -1.2 4,927,706 + -0.3 4,927,752 + Echvi_4115 0.19 +0.9 4,927,753 - Echvi_4115 0.20 +0.0 4,927,756 + Echvi_4115 0.20 +1.0 4,927,756 + Echvi_4115 0.20 +0.2 4,927,757 - Echvi_4115 0.21 -1.3 4,927,757 - Echvi_4115 0.21 -0.1 4,927,757 - Echvi_4115 0.21 -0.5 4,927,760 + Echvi_4115 0.22 +0.4 4,927,793 + Echvi_4115 0.31 -0.7 4,927,794 - Echvi_4115 0.32 +0.5 4,927,815 + Echvi_4115 0.38 -0.3 4,927,816 - Echvi_4115 0.38 -0.7 4,927,816 - Echvi_4115 0.38 +0.2 4,927,816 - Echvi_4115 0.38 -1.3 4,927,816 - Echvi_4115 0.38 +0.3 4,927,816 - Echvi_4115 0.38 -1.1 4,928,032 - -1.0 4,928,033 + +0.7 4,928,039 + -1.1 4,928,039 + -0.4 4,928,093 - +0.1 4,928,093 - -1.3 4,928,094 + +0.8 4,928,098 + -0.1 4,928,099 - -2.5 4,928,113 + +1.1 4,928,114 - +1.0 4,928,153 + +0.4 4,928,153 + -0.0 4,928,181 - -1.3 4,928,195 + -0.2 4,928,195 + -1.8 4,928,195 + -0.3 4,928,210 - -0.3 4,928,210 - -0.6 4,928,247 + -1.2 4,928,248 - +0.3 4,928,250 + -0.8 4,928,251 - -1.5 4,928,251 - +0.5 4,928,251 - +0.6 4,928,251 - -0.4 4,928,340 - Echvi_4116 0.11 -1.0 4,928,397 - Echvi_4116 0.16 +0.7 4,928,404 + Echvi_4116 0.16 -0.5 4,928,405 - Echvi_4116 0.17 -0.8 4,928,490 + Echvi_4116 0.23 -0.5 4,928,490 + Echvi_4116 0.23 -1.9 4,928,504 + Echvi_4116 0.25 -2.1 4,928,518 + Echvi_4116 0.26 -2.1 4,928,519 - Echvi_4116 0.26 -0.9 4,928,538 - Echvi_4116 0.27 -1.1 4,928,538 - Echvi_4116 0.27 -0.8 4,928,584 - Echvi_4116 0.31 -2.0 4,928,597 + Echvi_4116 0.32 -3.0 4,928,598 - Echvi_4116 0.32 +0.9 4,928,651 - Echvi_4116 0.36 -0.6 4,928,676 - Echvi_4116 0.39 -1.6 4,928,693 + Echvi_4116 0.40 -2.7 4,928,693 + Echvi_4116 0.40 -1.5 4,928,693 + Echvi_4116 0.40 -0.1 4,928,694 - Echvi_4116 0.40 -1.3 4,928,694 - Echvi_4116 0.40 -2.3 4,928,694 - Echvi_4116 0.40 -1.0 4,928,695 + Echvi_4116 0.40 -1.6 4,928,695 + Echvi_4116 0.40 -1.7 4,928,695 + Echvi_4116 0.40 -0.1 4,928,695 + Echvi_4116 0.40 -2.0 4,928,696 - Echvi_4116 0.40 -0.1 4,928,762 + Echvi_4116 0.45 -0.3 4,928,776 - Echvi_4116 0.47 -1.0 4,928,801 + Echvi_4116 0.49 +1.5 4,928,801 + Echvi_4116 0.49 -0.5 4,928,801 + Echvi_4116 0.49 -0.7 4,928,801 + Echvi_4116 0.49 +0.6 4,928,802 - Echvi_4116 0.49 -2.1 4,928,802 - Echvi_4116 0.49 -1.8 4,928,805 + Echvi_4116 0.49 -1.1 4,928,806 - Echvi_4116 0.49 -2.3 4,928,806 - Echvi_4116 0.49 -0.5 4,928,806 - Echvi_4116 0.49 -0.7 4,928,806 - Echvi_4116 0.49 -2.4 4,928,806 - Echvi_4116 0.49 -0.1 4,928,922 + Echvi_4116 0.58 -0.9 4,928,930 - Echvi_4116 0.59 -0.2 4,928,952 + Echvi_4116 0.61 -0.8 4,928,953 - Echvi_4116 0.61 -1.4 4,928,953 - Echvi_4116 0.61 +0.0 4,928,988 + Echvi_4116 0.64 -0.2 4,928,993 + Echvi_4116 0.64 -1.2 4,929,019 + Echvi_4116 0.66 +2.2 4,929,019 + Echvi_4116 0.66 -1.6 4,929,019 + Echvi_4116 0.66 -0.5 4,929,026 + Echvi_4116 0.67 -1.7 4,929,073 + Echvi_4116 0.71 +0.2 4,929,095 + Echvi_4116 0.73 -1.8 4,929,095 + Echvi_4116 0.73 -1.0 4,929,096 - Echvi_4116 0.73 -0.6 4,929,110 + Echvi_4116 0.74 -0.2 4,929,110 + Echvi_4116 0.74 -0.9 4,929,115 + Echvi_4116 0.74 +0.9 4,929,127 + Echvi_4116 0.75 -1.8 4,929,127 + Echvi_4116 0.75 -2.1 4,929,159 - Echvi_4116 0.78 -2.2 4,929,245 - Echvi_4116 0.85 -1.0 4,929,254 + Echvi_4116 0.85 +0.5 4,929,254 + Echvi_4116 0.85 -2.7 4,929,260 + Echvi_4116 0.86 -1.1 4,929,289 + Echvi_4116 0.88 +1.1 4,929,383 + -1.7 4,929,415 - -0.9 4,929,415 - -1.9 4,929,417 - -0.6 4,929,440 + +0.9 4,929,441 - +0.4 4,929,448 + -1.3 4,929,448 + -1.8 4,929,448 + -0.5 4,929,449 - +0.0 4,929,451 - -1.2 4,929,486 + -0.9 4,929,487 - -1.1 4,929,487 - -0.6 4,929,490 + -1.6 4,929,490 + -0.8 4,929,490 + +0.3 4,929,493 + -0.9 4,929,520 + -1.3 4,929,593 - -0.4 4,929,598 - -0.6 4,929,673 + -0.2 4,929,673 + -1.7 4,929,674 - -2.0 4,929,822 + -1.6 4,929,833 + -0.2 4,929,833 + +0.2 4,929,833 + -1.6 4,929,834 - -1.0 4,929,836 + +0.7 4,929,836 + -0.5 4,929,836 + -1.7 4,929,837 - -2.2 4,929,840 + -3.0 4,929,841 - -2.6 4,929,854 - -0.0 4,929,873 + -1.1 4,929,873 + -0.9 4,929,874 - -1.2 4,929,874 - -2.0 4,929,889 + -2.0 4,929,889 + -3.4 4,929,890 - -1.8 4,929,938 + Echvi_4117 0.11 -2.0 4,929,975 + Echvi_4117 0.11 -2.0 4,929,976 - Echvi_4117 0.11 -1.3 4,930,008 - Echvi_4117 0.12 -0.5 4,930,010 - Echvi_4117 0.12 -1.6 4,930,051 - Echvi_4117 0.13 -2.1 4,930,064 + Echvi_4117 0.13 -0.9 4,930,064 + Echvi_4117 0.13 -2.3 4,930,087 - Echvi_4117 0.14 -0.1 4,930,095 + Echvi_4117 0.14 -1.4 4,930,108 + Echvi_4117 0.14 +0.3 4,930,187 + Echvi_4117 0.16 -1.4 4,930,188 - Echvi_4117 0.16 -2.5 4,930,224 + Echvi_4117 0.17 -0.8 4,930,225 - Echvi_4117 0.17 +0.1 4,930,226 + Echvi_4117 0.17 -1.3 4,930,226 + Echvi_4117 0.17 -1.5 4,930,226 + Echvi_4117 0.17 -0.9 4,930,227 - Echvi_4117 0.17 -0.5 4,930,230 + Echvi_4117 0.17 -1.8 4,930,231 - Echvi_4117 0.17 -1.5 4,930,231 - Echvi_4117 0.17 -0.7 4,930,233 - Echvi_4117 0.17 -0.3 4,930,233 - Echvi_4117 0.17 -0.3 4,930,236 + Echvi_4117 0.17 -0.8 4,930,255 + Echvi_4117 0.18 -0.2 4,930,282 + Echvi_4117 0.18 -1.3 4,930,282 + Echvi_4117 0.18 -0.7 4,930,282 + Echvi_4117 0.18 -1.3 4,930,283 - Echvi_4117 0.18 -1.0 4,930,379 + Echvi_4117 0.20 -0.8 4,930,386 - Echvi_4117 0.21 +1.2 4,930,428 + Echvi_4117 0.22 -1.0 4,930,428 + Echvi_4117 0.22 -1.6
Or see this region's nucleotide sequence