Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3618 and Echvi_3619 are separated by 92 nucleotides Echvi_3619 and Echvi_3620 are separated by 52 nucleotides
Echvi_3618: Echvi_3618 - hypothetical protein, at 4,293,472 to 4,295,046
_3618
Echvi_3619: Echvi_3619 - RND family efflux transporter, MFP subunit, at 4,295,139 to 4,296,290
_3619
Echvi_3620: Echvi_3620 - heavy metal efflux pump (cobalt-zinc-cadmium), at 4,296,343 to 4,300,698
_3620
Position (kb)
4295
4296
4297 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4294.226 kb on + strand, within Echvi_3618 at 4294.226 kb on + strand, within Echvi_3618 at 4294.246 kb on + strand, within Echvi_3618 at 4294.247 kb on - strand, within Echvi_3618 at 4294.249 kb on + strand, within Echvi_3618 at 4294.249 kb on + strand, within Echvi_3618 at 4294.282 kb on + strand, within Echvi_3618 at 4294.283 kb on - strand, within Echvi_3618 at 4294.283 kb on - strand, within Echvi_3618 at 4294.285 kb on + strand, within Echvi_3618 at 4294.285 kb on + strand, within Echvi_3618 at 4294.286 kb on - strand, within Echvi_3618 at 4294.322 kb on - strand, within Echvi_3618 at 4294.326 kb on + strand, within Echvi_3618 at 4294.326 kb on + strand, within Echvi_3618 at 4294.429 kb on + strand, within Echvi_3618 at 4294.429 kb on + strand, within Echvi_3618 at 4294.429 kb on + strand, within Echvi_3618 at 4294.429 kb on + strand, within Echvi_3618 at 4294.430 kb on - strand, within Echvi_3618 at 4294.432 kb on - strand, within Echvi_3618 at 4294.433 kb on + strand, within Echvi_3618 at 4294.462 kb on - strand, within Echvi_3618 at 4294.462 kb on - strand, within Echvi_3618 at 4294.479 kb on + strand, within Echvi_3618 at 4294.498 kb on - strand, within Echvi_3618 at 4294.499 kb on + strand, within Echvi_3618 at 4294.499 kb on + strand, within Echvi_3618 at 4294.563 kb on + strand, within Echvi_3618 at 4294.617 kb on + strand, within Echvi_3618 at 4294.617 kb on + strand, within Echvi_3618 at 4294.618 kb on - strand, within Echvi_3618 at 4294.618 kb on - strand, within Echvi_3618 at 4294.668 kb on - strand, within Echvi_3618 at 4294.723 kb on + strand, within Echvi_3618 at 4294.723 kb on + strand, within Echvi_3618 at 4294.724 kb on - strand, within Echvi_3618 at 4294.724 kb on - strand at 4294.724 kb on - strand, within Echvi_3618 at 4294.731 kb on - strand, within Echvi_3618 at 4294.767 kb on + strand, within Echvi_3618 at 4294.767 kb on + strand, within Echvi_3618 at 4294.768 kb on - strand, within Echvi_3618 at 4294.768 kb on - strand, within Echvi_3618 at 4294.768 kb on - strand, within Echvi_3618 at 4294.793 kb on - strand, within Echvi_3618 at 4295.001 kb on + strand at 4295.001 kb on + strand at 4295.001 kb on + strand at 4295.001 kb on + strand at 4295.001 kb on + strand at 4295.002 kb on - strand at 4295.002 kb on - strand at 4295.002 kb on - strand at 4295.004 kb on + strand at 4295.004 kb on + strand at 4295.004 kb on + strand at 4295.005 kb on - strand at 4295.079 kb on - strand at 4295.093 kb on - strand at 4295.121 kb on + strand at 4295.186 kb on - strand at 4295.189 kb on - strand at 4295.196 kb on - strand at 4295.267 kb on + strand, within Echvi_3619 at 4295.268 kb on - strand, within Echvi_3619 at 4295.274 kb on + strand, within Echvi_3619 at 4295.274 kb on + strand, within Echvi_3619 at 4295.400 kb on + strand, within Echvi_3619 at 4295.401 kb on - strand, within Echvi_3619 at 4295.401 kb on - strand, within Echvi_3619 at 4295.401 kb on - strand, within Echvi_3619 at 4295.412 kb on + strand, within Echvi_3619 at 4295.416 kb on + strand, within Echvi_3619 at 4295.416 kb on + strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.417 kb on - strand, within Echvi_3619 at 4295.465 kb on + strand, within Echvi_3619 at 4295.466 kb on - strand, within Echvi_3619 at 4295.509 kb on + strand, within Echvi_3619 at 4295.509 kb on + strand, within Echvi_3619 at 4295.509 kb on + strand, within Echvi_3619 at 4295.510 kb on - strand, within Echvi_3619 at 4295.510 kb on - strand, within Echvi_3619 at 4295.548 kb on - strand, within Echvi_3619 at 4295.621 kb on + strand, within Echvi_3619 at 4295.665 kb on - strand, within Echvi_3619 at 4295.665 kb on - strand, within Echvi_3619 at 4295.668 kb on + strand, within Echvi_3619 at 4295.668 kb on + strand, within Echvi_3619 at 4295.697 kb on - strand, within Echvi_3619 at 4295.697 kb on - strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.699 kb on + strand, within Echvi_3619 at 4295.700 kb on - strand, within Echvi_3619 at 4295.700 kb on - strand, within Echvi_3619 at 4295.702 kb on - strand, within Echvi_3619 at 4295.779 kb on - strand, within Echvi_3619 at 4295.785 kb on - strand, within Echvi_3619 at 4295.818 kb on - strand, within Echvi_3619 at 4295.818 kb on - strand, within Echvi_3619 at 4295.878 kb on + strand, within Echvi_3619 at 4295.879 kb on - strand, within Echvi_3619 at 4296.028 kb on - strand, within Echvi_3619 at 4296.037 kb on - strand, within Echvi_3619 at 4296.050 kb on + strand, within Echvi_3619 at 4296.050 kb on + strand, within Echvi_3619 at 4296.051 kb on - strand, within Echvi_3619 at 4296.051 kb on - strand, within Echvi_3619 at 4296.051 kb on - strand, within Echvi_3619 at 4296.052 kb on + strand, within Echvi_3619 at 4296.052 kb on + strand, within Echvi_3619 at 4296.053 kb on - strand at 4296.053 kb on - strand, within Echvi_3619 at 4296.053 kb on - strand, within Echvi_3619 at 4296.053 kb on - strand, within Echvi_3619 at 4296.103 kb on - strand, within Echvi_3619 at 4296.125 kb on + strand, within Echvi_3619 at 4296.126 kb on - strand, within Echvi_3619 at 4296.181 kb on - strand at 4296.186 kb on + strand at 4296.186 kb on + strand at 4296.186 kb on + strand at 4296.187 kb on - strand at 4296.240 kb on - strand at 4296.240 kb on - strand at 4296.315 kb on + strand at 4296.315 kb on + strand at 4296.315 kb on + strand at 4296.315 kb on + strand at 4296.316 kb on - strand at 4296.327 kb on + strand at 4296.327 kb on + strand at 4296.328 kb on - strand at 4296.336 kb on + strand at 4296.344 kb on + strand at 4296.345 kb on - strand at 4296.347 kb on + strand at 4296.347 kb on + strand at 4296.347 kb on + strand at 4296.348 kb on - strand at 4296.348 kb on - strand at 4296.348 kb on - strand at 4296.380 kb on + strand at 4296.416 kb on - strand at 4296.500 kb on + strand at 4296.501 kb on - strand at 4296.557 kb on + strand at 4296.715 kb on + strand at 4296.715 kb on + strand at 4296.716 kb on - strand at 4296.717 kb on + strand at 4296.717 kb on + strand at 4296.718 kb on - strand at 4296.728 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.785 kb on + strand, within Echvi_3620 at 4296.787 kb on + strand, within Echvi_3620 at 4296.788 kb on - strand, within Echvi_3620 at 4296.788 kb on - strand, within Echvi_3620 at 4296.788 kb on - strand, within Echvi_3620 at 4296.788 kb on - strand, within Echvi_3620 at 4296.820 kb on + strand, within Echvi_3620 at 4296.820 kb on + strand, within Echvi_3620 at 4296.821 kb on - strand, within Echvi_3620 at 4296.882 kb on + strand, within Echvi_3620 at 4296.883 kb on - strand, within Echvi_3620 at 4296.889 kb on + strand, within Echvi_3620 at 4296.889 kb on + strand, within Echvi_3620 at 4297.051 kb on + strand, within Echvi_3620 at 4297.051 kb on + strand, within Echvi_3620 at 4297.051 kb on + strand, within Echvi_3620 at 4297.051 kb on + strand, within Echvi_3620 at 4297.052 kb on - strand, within Echvi_3620 at 4297.052 kb on - strand, within Echvi_3620 at 4297.060 kb on + strand, within Echvi_3620 at 4297.060 kb on + strand, within Echvi_3620 at 4297.119 kb on - strand, within Echvi_3620 at 4297.142 kb on - strand, within Echvi_3620 at 4297.148 kb on + strand, within Echvi_3620 at 4297.149 kb on - strand, within Echvi_3620 at 4297.166 kb on + strand, within Echvi_3620 at 4297.166 kb on + strand, within Echvi_3620 at 4297.167 kb on - strand, within Echvi_3620 at 4297.167 kb on - strand, within Echvi_3620 at 4297.190 kb on - strand, within Echvi_3620 at 4297.259 kb on + strand, within Echvi_3620 at 4297.263 kb on + strand, within Echvi_3620 at 4297.263 kb on + strand, within Echvi_3620 at 4297.263 kb on + strand, within Echvi_3620 at 4297.263 kb on + strand, within Echvi_3620 at 4297.264 kb on - strand, within Echvi_3620 at 4297.264 kb on - strand, within Echvi_3620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,294,226 + Echvi_3618 0.48 -0.0 4,294,226 + Echvi_3618 0.48 -0.6 4,294,246 + Echvi_3618 0.49 +0.3 4,294,247 - Echvi_3618 0.49 -0.1 4,294,249 + Echvi_3618 0.49 +2.5 4,294,249 + Echvi_3618 0.49 -0.9 4,294,282 + Echvi_3618 0.51 -0.3 4,294,283 - Echvi_3618 0.51 -0.0 4,294,283 - Echvi_3618 0.51 +1.3 4,294,285 + Echvi_3618 0.52 -0.8 4,294,285 + Echvi_3618 0.52 +0.5 4,294,286 - Echvi_3618 0.52 -0.7 4,294,322 - Echvi_3618 0.54 +1.2 4,294,326 + Echvi_3618 0.54 -0.9 4,294,326 + Echvi_3618 0.54 -1.2 4,294,429 + Echvi_3618 0.61 +0.4 4,294,429 + Echvi_3618 0.61 +0.0 4,294,429 + Echvi_3618 0.61 -0.8 4,294,429 + Echvi_3618 0.61 -0.8 4,294,430 - Echvi_3618 0.61 +0.1 4,294,432 - Echvi_3618 0.61 +0.1 4,294,433 + Echvi_3618 0.61 -0.2 4,294,462 - Echvi_3618 0.63 -1.9 4,294,462 - Echvi_3618 0.63 +0.2 4,294,479 + Echvi_3618 0.64 +0.1 4,294,498 - Echvi_3618 0.65 -0.2 4,294,499 + Echvi_3618 0.65 -1.3 4,294,499 + Echvi_3618 0.65 -0.1 4,294,563 + Echvi_3618 0.69 -0.1 4,294,617 + Echvi_3618 0.73 -0.4 4,294,617 + Echvi_3618 0.73 -0.0 4,294,618 - Echvi_3618 0.73 -0.5 4,294,618 - Echvi_3618 0.73 +0.4 4,294,668 - Echvi_3618 0.76 +0.6 4,294,723 + Echvi_3618 0.79 +0.4 4,294,723 + Echvi_3618 0.79 +0.2 4,294,724 - Echvi_3618 0.79 -0.5 4,294,724 - +1.0 4,294,724 - Echvi_3618 0.79 -0.5 4,294,731 - Echvi_3618 0.80 -0.5 4,294,767 + Echvi_3618 0.82 -0.4 4,294,767 + Echvi_3618 0.82 +0.0 4,294,768 - Echvi_3618 0.82 -0.9 4,294,768 - Echvi_3618 0.82 -0.1 4,294,768 - Echvi_3618 0.82 +0.4 4,294,793 - Echvi_3618 0.84 +0.0 4,295,001 + +0.4 4,295,001 + +0.7 4,295,001 + +0.1 4,295,001 + +0.7 4,295,001 + +0.3 4,295,002 - +0.1 4,295,002 - +0.8 4,295,002 - -1.0 4,295,004 + +0.4 4,295,004 + +0.2 4,295,004 + -1.8 4,295,005 - +0.4 4,295,079 - -0.0 4,295,093 - -0.6 4,295,121 + +0.3 4,295,186 - -0.5 4,295,189 - -0.1 4,295,196 - -0.2 4,295,267 + Echvi_3619 0.11 +0.1 4,295,268 - Echvi_3619 0.11 +0.5 4,295,274 + Echvi_3619 0.12 -1.1 4,295,274 + Echvi_3619 0.12 +0.0 4,295,400 + Echvi_3619 0.23 -0.0 4,295,401 - Echvi_3619 0.23 -1.3 4,295,401 - Echvi_3619 0.23 -0.5 4,295,401 - Echvi_3619 0.23 -0.3 4,295,412 + Echvi_3619 0.24 +0.2 4,295,416 + Echvi_3619 0.24 +1.5 4,295,416 + Echvi_3619 0.24 +0.1 4,295,417 - Echvi_3619 0.24 +0.2 4,295,417 - Echvi_3619 0.24 +0.2 4,295,417 - Echvi_3619 0.24 -2.1 4,295,417 - Echvi_3619 0.24 -0.8 4,295,417 - Echvi_3619 0.24 +1.0 4,295,417 - Echvi_3619 0.24 +0.5 4,295,465 + Echvi_3619 0.28 +0.4 4,295,466 - Echvi_3619 0.28 +0.0 4,295,509 + Echvi_3619 0.32 +2.3 4,295,509 + Echvi_3619 0.32 +0.8 4,295,509 + Echvi_3619 0.32 +0.3 4,295,510 - Echvi_3619 0.32 +2.0 4,295,510 - Echvi_3619 0.32 -1.3 4,295,548 - Echvi_3619 0.36 +0.5 4,295,621 + Echvi_3619 0.42 -0.7 4,295,665 - Echvi_3619 0.46 -1.2 4,295,665 - Echvi_3619 0.46 -0.0 4,295,668 + Echvi_3619 0.46 -0.4 4,295,668 + Echvi_3619 0.46 -0.3 4,295,697 - Echvi_3619 0.48 +1.0 4,295,697 - Echvi_3619 0.48 +0.4 4,295,699 + Echvi_3619 0.49 +0.3 4,295,699 + Echvi_3619 0.49 +0.4 4,295,699 + Echvi_3619 0.49 +0.2 4,295,699 + Echvi_3619 0.49 +0.0 4,295,699 + Echvi_3619 0.49 +0.3 4,295,699 + Echvi_3619 0.49 -0.3 4,295,699 + Echvi_3619 0.49 +0.6 4,295,700 - Echvi_3619 0.49 +1.3 4,295,700 - Echvi_3619 0.49 -0.6 4,295,702 - Echvi_3619 0.49 +0.3 4,295,779 - Echvi_3619 0.56 -0.8 4,295,785 - Echvi_3619 0.56 -0.7 4,295,818 - Echvi_3619 0.59 -0.2 4,295,818 - Echvi_3619 0.59 +0.6 4,295,878 + Echvi_3619 0.64 +0.4 4,295,879 - Echvi_3619 0.64 +0.2 4,296,028 - Echvi_3619 0.77 +0.4 4,296,037 - Echvi_3619 0.78 -0.5 4,296,050 + Echvi_3619 0.79 -1.4 4,296,050 + Echvi_3619 0.79 -0.2 4,296,051 - Echvi_3619 0.79 -0.9 4,296,051 - Echvi_3619 0.79 -0.1 4,296,051 - Echvi_3619 0.79 -0.4 4,296,052 + Echvi_3619 0.79 -0.2 4,296,052 + Echvi_3619 0.79 +1.4 4,296,053 - +0.5 4,296,053 - Echvi_3619 0.79 -0.4 4,296,053 - Echvi_3619 0.79 -0.8 4,296,053 - Echvi_3619 0.79 -0.2 4,296,103 - Echvi_3619 0.84 -0.6 4,296,125 + Echvi_3619 0.86 +0.7 4,296,126 - Echvi_3619 0.86 +0.7 4,296,181 - -0.0 4,296,186 + +0.0 4,296,186 + +0.3 4,296,186 + +0.3 4,296,187 - -0.7 4,296,240 - -1.5 4,296,240 - -0.5 4,296,315 + +0.6 4,296,315 + +0.8 4,296,315 + -1.4 4,296,315 + -2.3 4,296,316 - +0.2 4,296,327 + -0.7 4,296,327 + -0.9 4,296,328 - -1.7 4,296,336 + -1.0 4,296,344 + -0.0 4,296,345 - -0.3 4,296,347 + +0.0 4,296,347 + -1.3 4,296,347 + +0.4 4,296,348 - +0.0 4,296,348 - +0.8 4,296,348 - -0.3 4,296,380 + -0.5 4,296,416 - -1.6 4,296,500 + -0.7 4,296,501 - +0.4 4,296,557 + -0.4 4,296,715 + -1.7 4,296,715 + +0.3 4,296,716 - -0.7 4,296,717 + +0.5 4,296,717 + -0.7 4,296,718 - +0.3 4,296,728 - +1.2 4,296,742 - +0.8 4,296,742 - -0.6 4,296,785 + Echvi_3620 0.10 -0.7 4,296,787 + Echvi_3620 0.10 -0.8 4,296,788 - Echvi_3620 0.10 -0.9 4,296,788 - Echvi_3620 0.10 +0.2 4,296,788 - Echvi_3620 0.10 -1.0 4,296,788 - Echvi_3620 0.10 -0.9 4,296,820 + Echvi_3620 0.11 -0.1 4,296,820 + Echvi_3620 0.11 +0.2 4,296,821 - Echvi_3620 0.11 +0.9 4,296,882 + Echvi_3620 0.12 -1.3 4,296,883 - Echvi_3620 0.12 -0.6 4,296,889 + Echvi_3620 0.13 -0.1 4,296,889 + Echvi_3620 0.13 +0.1 4,297,051 + Echvi_3620 0.16 +0.4 4,297,051 + Echvi_3620 0.16 -0.2 4,297,051 + Echvi_3620 0.16 +0.3 4,297,051 + Echvi_3620 0.16 +0.1 4,297,052 - Echvi_3620 0.16 -1.6 4,297,052 - Echvi_3620 0.16 +0.2 4,297,060 + Echvi_3620 0.16 +0.1 4,297,060 + Echvi_3620 0.16 -0.6 4,297,119 - Echvi_3620 0.18 -0.7 4,297,142 - Echvi_3620 0.18 -0.4 4,297,148 + Echvi_3620 0.18 -0.4 4,297,149 - Echvi_3620 0.19 +0.7 4,297,166 + Echvi_3620 0.19 -0.6 4,297,166 + Echvi_3620 0.19 +0.6 4,297,167 - Echvi_3620 0.19 -1.6 4,297,167 - Echvi_3620 0.19 -0.4 4,297,190 - Echvi_3620 0.19 -0.0 4,297,259 + Echvi_3620 0.21 -0.9 4,297,263 + Echvi_3620 0.21 -0.9 4,297,263 + Echvi_3620 0.21 -0.2 4,297,263 + Echvi_3620 0.21 +0.5 4,297,263 + Echvi_3620 0.21 -1.2 4,297,264 - Echvi_3620 0.21 -0.5 4,297,264 - Echvi_3620 0.21 -0.6
Or see this region's nucleotide sequence