Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3526 and Echvi_3527 are separated by 217 nucleotides Echvi_3527 and Echvi_3528 are separated by 427 nucleotides
Echvi_3526: Echvi_3526 - Fe2+-dicitrate sensor, membrane component, at 4,178,960 to 4,180,114
_3526
Echvi_3527: Echvi_3527 - RNA polymerase sigma-70 factor, Bacteroides expansion family 1, at 4,180,332 to 4,180,910
_3527
Echvi_3528: Echvi_3528 - Erythromycin esterase homolog, at 4,181,338 to 4,182,594
_3528
Position (kb)
4180
4181 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4179.375 kb on - strand, within Echvi_3526 at 4179.379 kb on + strand, within Echvi_3526 at 4179.442 kb on + strand, within Echvi_3526 at 4179.462 kb on + strand, within Echvi_3526 at 4179.462 kb on + strand, within Echvi_3526 at 4179.463 kb on - strand, within Echvi_3526 at 4179.463 kb on - strand, within Echvi_3526 at 4179.601 kb on + strand, within Echvi_3526 at 4179.602 kb on - strand, within Echvi_3526 at 4179.611 kb on - strand, within Echvi_3526 at 4179.611 kb on - strand, within Echvi_3526 at 4179.612 kb on + strand, within Echvi_3526 at 4179.654 kb on + strand, within Echvi_3526 at 4179.686 kb on + strand, within Echvi_3526 at 4179.692 kb on - strand, within Echvi_3526 at 4179.722 kb on + strand, within Echvi_3526 at 4179.723 kb on - strand, within Echvi_3526 at 4179.731 kb on + strand, within Echvi_3526 at 4179.732 kb on - strand, within Echvi_3526 at 4179.772 kb on + strand, within Echvi_3526 at 4179.785 kb on - strand, within Echvi_3526 at 4179.823 kb on - strand, within Echvi_3526 at 4179.831 kb on + strand, within Echvi_3526 at 4179.832 kb on - strand, within Echvi_3526 at 4179.891 kb on + strand, within Echvi_3526 at 4179.976 kb on + strand, within Echvi_3526 at 4179.977 kb on - strand, within Echvi_3526 at 4179.977 kb on - strand, within Echvi_3526 at 4179.977 kb on - strand, within Echvi_3526 at 4179.999 kb on - strand at 4180.012 kb on - strand at 4180.089 kb on + strand at 4180.090 kb on - strand at 4180.094 kb on + strand at 4180.094 kb on + strand at 4180.095 kb on - strand at 4180.095 kb on - strand at 4180.098 kb on - strand at 4180.167 kb on - strand at 4180.177 kb on - strand at 4180.202 kb on + strand at 4180.202 kb on + strand at 4180.202 kb on + strand at 4180.203 kb on - strand at 4180.203 kb on - strand at 4180.203 kb on - strand at 4180.203 kb on - strand at 4180.279 kb on - strand at 4180.359 kb on + strand at 4180.462 kb on - strand, within Echvi_3527 at 4180.462 kb on - strand, within Echvi_3527 at 4180.606 kb on + strand, within Echvi_3527 at 4180.607 kb on - strand, within Echvi_3527 at 4180.607 kb on - strand, within Echvi_3527 at 4180.647 kb on + strand, within Echvi_3527 at 4180.647 kb on + strand, within Echvi_3527 at 4180.688 kb on - strand, within Echvi_3527 at 4180.737 kb on - strand, within Echvi_3527 at 4180.741 kb on - strand, within Echvi_3527 at 4180.809 kb on - strand, within Echvi_3527 at 4180.809 kb on - strand, within Echvi_3527 at 4180.814 kb on - strand, within Echvi_3527 at 4180.816 kb on + strand, within Echvi_3527 at 4180.816 kb on + strand, within Echvi_3527 at 4180.816 kb on + strand, within Echvi_3527 at 4180.816 kb on + strand, within Echvi_3527 at 4180.816 kb on + strand, within Echvi_3527 at 4180.817 kb on - strand, within Echvi_3527 at 4180.817 kb on - strand, within Echvi_3527 at 4180.818 kb on + strand, within Echvi_3527 at 4180.819 kb on - strand, within Echvi_3527 at 4180.823 kb on + strand, within Echvi_3527 at 4180.860 kb on + strand at 4180.871 kb on + strand at 4180.889 kb on + strand at 4180.889 kb on + strand at 4180.890 kb on - strand at 4180.919 kb on - strand at 4180.986 kb on - strand at 4181.073 kb on + strand at 4181.074 kb on - strand at 4181.078 kb on + strand at 4181.085 kb on + strand at 4181.108 kb on + strand at 4181.108 kb on + strand at 4181.112 kb on - strand at 4181.120 kb on - strand at 4181.130 kb on + strand at 4181.131 kb on - strand at 4181.131 kb on - strand at 4181.207 kb on + strand at 4181.210 kb on - strand at 4181.210 kb on - strand at 4181.256 kb on + strand at 4181.257 kb on - strand at 4181.269 kb on + strand at 4181.269 kb on + strand at 4181.269 kb on + strand at 4181.336 kb on + strand at 4181.337 kb on - strand at 4181.337 kb on - strand at 4181.337 kb on - strand at 4181.339 kb on + strand at 4181.340 kb on - strand at 4181.340 kb on - strand at 4181.399 kb on + strand at 4181.400 kb on - strand at 4181.400 kb on - strand at 4181.400 kb on - strand at 4181.430 kb on - strand at 4181.435 kb on + strand at 4181.448 kb on - strand at 4181.449 kb on + strand at 4181.495 kb on + strand, within Echvi_3528 at 4181.495 kb on + strand, within Echvi_3528 at 4181.495 kb on + strand, within Echvi_3528 at 4181.495 kb on + strand, within Echvi_3528 at 4181.495 kb on + strand, within Echvi_3528 at 4181.496 kb on - strand, within Echvi_3528 at 4181.496 kb on - strand, within Echvi_3528 at 4181.496 kb on - strand, within Echvi_3528 at 4181.500 kb on - strand, within Echvi_3528 at 4181.500 kb on - strand, within Echvi_3528 at 4181.502 kb on + strand, within Echvi_3528 at 4181.502 kb on + strand, within Echvi_3528 at 4181.502 kb on + strand, within Echvi_3528 at 4181.502 kb on + strand, within Echvi_3528 at 4181.542 kb on - strand, within Echvi_3528 at 4181.563 kb on + strand, within Echvi_3528 at 4181.574 kb on + strand, within Echvi_3528 at 4181.574 kb on + strand, within Echvi_3528 at 4181.574 kb on + strand, within Echvi_3528 at 4181.575 kb on - strand, within Echvi_3528 at 4181.601 kb on + strand, within Echvi_3528 at 4181.602 kb on - strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.610 kb on + strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.611 kb on - strand, within Echvi_3528 at 4181.616 kb on + strand, within Echvi_3528 at 4181.619 kb on + strand, within Echvi_3528 at 4181.619 kb on + strand, within Echvi_3528 at 4181.619 kb on + strand, within Echvi_3528 at 4181.675 kb on + strand, within Echvi_3528 at 4181.676 kb on - strand, within Echvi_3528 at 4181.679 kb on - strand, within Echvi_3528 at 4181.679 kb on - strand, within Echvi_3528 at 4181.733 kb on - strand, within Echvi_3528 at 4181.733 kb on - strand, within Echvi_3528 at 4181.742 kb on - strand, within Echvi_3528 at 4181.742 kb on - strand, within Echvi_3528 at 4181.742 kb on - strand, within Echvi_3528 at 4181.746 kb on + strand, within Echvi_3528 at 4181.746 kb on + strand, within Echvi_3528 at 4181.747 kb on - strand, within Echvi_3528 at 4181.747 kb on - strand, within Echvi_3528 at 4181.747 kb on - strand, within Echvi_3528 at 4181.747 kb on - strand, within Echvi_3528 at 4181.748 kb on + strand, within Echvi_3528 at 4181.748 kb on + strand, within Echvi_3528 at 4181.748 kb on + strand, within Echvi_3528 at 4181.748 kb on + strand, within Echvi_3528 at 4181.749 kb on - strand, within Echvi_3528 at 4181.749 kb on - strand, within Echvi_3528 at 4181.755 kb on - strand, within Echvi_3528 at 4181.774 kb on - strand, within Echvi_3528 at 4181.814 kb on + strand, within Echvi_3528 at 4181.851 kb on - strand, within Echvi_3528 at 4181.910 kb on + strand, within Echvi_3528 at 4181.910 kb on + strand, within Echvi_3528
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,179,375 - Echvi_3526 0.36 -2.3 4,179,379 + Echvi_3526 0.36 -1.3 4,179,442 + Echvi_3526 0.42 -1.5 4,179,462 + Echvi_3526 0.43 -0.4 4,179,462 + Echvi_3526 0.43 +0.2 4,179,463 - Echvi_3526 0.44 -0.2 4,179,463 - Echvi_3526 0.44 -2.4 4,179,601 + Echvi_3526 0.55 -0.5 4,179,602 - Echvi_3526 0.56 -2.1 4,179,611 - Echvi_3526 0.56 -1.5 4,179,611 - Echvi_3526 0.56 -1.5 4,179,612 + Echvi_3526 0.56 +0.7 4,179,654 + Echvi_3526 0.60 -0.9 4,179,686 + Echvi_3526 0.63 -0.2 4,179,692 - Echvi_3526 0.63 -0.1 4,179,722 + Echvi_3526 0.66 +0.1 4,179,723 - Echvi_3526 0.66 -0.5 4,179,731 + Echvi_3526 0.67 -0.3 4,179,732 - Echvi_3526 0.67 -0.2 4,179,772 + Echvi_3526 0.70 +1.2 4,179,785 - Echvi_3526 0.71 -0.7 4,179,823 - Echvi_3526 0.75 -0.5 4,179,831 + Echvi_3526 0.75 -0.2 4,179,832 - Echvi_3526 0.75 -1.1 4,179,891 + Echvi_3526 0.81 -1.4 4,179,976 + Echvi_3526 0.88 -1.8 4,179,977 - Echvi_3526 0.88 -2.7 4,179,977 - Echvi_3526 0.88 -0.7 4,179,977 - Echvi_3526 0.88 -1.7 4,179,999 - -0.7 4,180,012 - -1.1 4,180,089 + -1.1 4,180,090 - -3.4 4,180,094 + +1.6 4,180,094 + +0.9 4,180,095 - -0.2 4,180,095 - +0.5 4,180,098 - +0.2 4,180,167 - -1.2 4,180,177 - -2.7 4,180,202 + +0.5 4,180,202 + +0.2 4,180,202 + +0.2 4,180,203 - +0.7 4,180,203 - +0.9 4,180,203 - +0.1 4,180,203 - +0.4 4,180,279 - -0.5 4,180,359 + -0.1 4,180,462 - Echvi_3527 0.22 +0.3 4,180,462 - Echvi_3527 0.22 -0.6 4,180,606 + Echvi_3527 0.47 -0.1 4,180,607 - Echvi_3527 0.47 +1.2 4,180,607 - Echvi_3527 0.47 +1.3 4,180,647 + Echvi_3527 0.54 +0.0 4,180,647 + Echvi_3527 0.54 +1.0 4,180,688 - Echvi_3527 0.61 +1.3 4,180,737 - Echvi_3527 0.70 +1.4 4,180,741 - Echvi_3527 0.71 +0.4 4,180,809 - Echvi_3527 0.82 +0.3 4,180,809 - Echvi_3527 0.82 +0.5 4,180,814 - Echvi_3527 0.83 +0.8 4,180,816 + Echvi_3527 0.84 -0.3 4,180,816 + Echvi_3527 0.84 +1.3 4,180,816 + Echvi_3527 0.84 +1.9 4,180,816 + Echvi_3527 0.84 -0.8 4,180,816 + Echvi_3527 0.84 -0.2 4,180,817 - Echvi_3527 0.84 -1.3 4,180,817 - Echvi_3527 0.84 -0.3 4,180,818 + Echvi_3527 0.84 +0.6 4,180,819 - Echvi_3527 0.84 -1.4 4,180,823 + Echvi_3527 0.85 -0.8 4,180,860 + -0.6 4,180,871 + +0.1 4,180,889 + -0.8 4,180,889 + -0.2 4,180,890 - +0.4 4,180,919 - +0.1 4,180,986 - +1.7 4,181,073 + -0.1 4,181,074 - -0.8 4,181,078 + -0.1 4,181,085 + -0.1 4,181,108 + -0.7 4,181,108 + -1.1 4,181,112 - -0.5 4,181,120 - +0.9 4,181,130 + +0.2 4,181,131 - +0.5 4,181,131 - -0.2 4,181,207 + +0.6 4,181,210 - +1.1 4,181,210 - +0.7 4,181,256 + +0.1 4,181,257 - -0.1 4,181,269 + -2.3 4,181,269 + -0.3 4,181,269 + -0.1 4,181,336 + -1.9 4,181,337 - +1.1 4,181,337 - +1.2 4,181,337 - -1.4 4,181,339 + -0.1 4,181,340 - +0.4 4,181,340 - -0.4 4,181,399 + +0.3 4,181,400 - -0.8 4,181,400 - +0.0 4,181,400 - +0.2 4,181,430 - -0.4 4,181,435 + -0.3 4,181,448 - +0.1 4,181,449 + -0.4 4,181,495 + Echvi_3528 0.12 -0.9 4,181,495 + Echvi_3528 0.12 -0.8 4,181,495 + Echvi_3528 0.12 +0.0 4,181,495 + Echvi_3528 0.12 -1.2 4,181,495 + Echvi_3528 0.12 +0.3 4,181,496 - Echvi_3528 0.13 -1.1 4,181,496 - Echvi_3528 0.13 -2.5 4,181,496 - Echvi_3528 0.13 -2.1 4,181,500 - Echvi_3528 0.13 -0.1 4,181,500 - Echvi_3528 0.13 +0.7 4,181,502 + Echvi_3528 0.13 +1.8 4,181,502 + Echvi_3528 0.13 +0.2 4,181,502 + Echvi_3528 0.13 -0.1 4,181,502 + Echvi_3528 0.13 -0.9 4,181,542 - Echvi_3528 0.16 -0.1 4,181,563 + Echvi_3528 0.18 -1.3 4,181,574 + Echvi_3528 0.19 +0.7 4,181,574 + Echvi_3528 0.19 +0.1 4,181,574 + Echvi_3528 0.19 -0.8 4,181,575 - Echvi_3528 0.19 -0.1 4,181,601 + Echvi_3528 0.21 +0.5 4,181,602 - Echvi_3528 0.21 -0.1 4,181,610 + Echvi_3528 0.22 -1.7 4,181,610 + Echvi_3528 0.22 -0.1 4,181,610 + Echvi_3528 0.22 +0.4 4,181,610 + Echvi_3528 0.22 -0.6 4,181,610 + Echvi_3528 0.22 +0.3 4,181,610 + Echvi_3528 0.22 +0.0 4,181,611 - Echvi_3528 0.22 +0.9 4,181,611 - Echvi_3528 0.22 -0.3 4,181,611 - Echvi_3528 0.22 +1.4 4,181,611 - Echvi_3528 0.22 +0.5 4,181,611 - Echvi_3528 0.22 +0.0 4,181,611 - Echvi_3528 0.22 +0.5 4,181,611 - Echvi_3528 0.22 +1.7 4,181,611 - Echvi_3528 0.22 +0.2 4,181,616 + Echvi_3528 0.22 +0.4 4,181,619 + Echvi_3528 0.22 -0.9 4,181,619 + Echvi_3528 0.22 +0.2 4,181,619 + Echvi_3528 0.22 -1.0 4,181,675 + Echvi_3528 0.27 -1.2 4,181,676 - Echvi_3528 0.27 +0.7 4,181,679 - Echvi_3528 0.27 -0.2 4,181,679 - Echvi_3528 0.27 -1.6 4,181,733 - Echvi_3528 0.31 -0.4 4,181,733 - Echvi_3528 0.31 -0.2 4,181,742 - Echvi_3528 0.32 +1.3 4,181,742 - Echvi_3528 0.32 +0.2 4,181,742 - Echvi_3528 0.32 +0.8 4,181,746 + Echvi_3528 0.32 -0.5 4,181,746 + Echvi_3528 0.32 +0.6 4,181,747 - Echvi_3528 0.33 -0.1 4,181,747 - Echvi_3528 0.33 +0.1 4,181,747 - Echvi_3528 0.33 +0.8 4,181,747 - Echvi_3528 0.33 -0.8 4,181,748 + Echvi_3528 0.33 -0.1 4,181,748 + Echvi_3528 0.33 -0.2 4,181,748 + Echvi_3528 0.33 +0.0 4,181,748 + Echvi_3528 0.33 -1.0 4,181,749 - Echvi_3528 0.33 -0.1 4,181,749 - Echvi_3528 0.33 -0.4 4,181,755 - Echvi_3528 0.33 -0.0 4,181,774 - Echvi_3528 0.35 -0.3 4,181,814 + Echvi_3528 0.38 +0.0 4,181,851 - Echvi_3528 0.41 -1.1 4,181,910 + Echvi_3528 0.46 +0.8 4,181,910 + Echvi_3528 0.46 -0.5
Or see this region's nucleotide sequence