Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2781 and Echvi_2782 are separated by 62 nucleotides Echvi_2782 and Echvi_2783 are separated by 264 nucleotides
Echvi_2781: Echvi_2781 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 3,322,132 to 3,325,260
_2781
Echvi_2782: Echvi_2782 - RND family efflux transporter, MFP subunit, at 3,325,323 to 3,326,477
_2782
Echvi_2783: Echvi_2783 - signal peptide peptidase SppA, 67K type, at 3,326,742 to 3,328,499
_2783
Position (kb)
3325
3326
3327 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3324.323 kb on + strand, within Echvi_2781 at 3324.323 kb on + strand, within Echvi_2781 at 3324.324 kb on - strand, within Echvi_2781 at 3324.328 kb on + strand, within Echvi_2781 at 3324.328 kb on + strand, within Echvi_2781 at 3324.328 kb on + strand, within Echvi_2781 at 3324.329 kb on - strand, within Echvi_2781 at 3324.329 kb on - strand, within Echvi_2781 at 3324.462 kb on + strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.463 kb on - strand, within Echvi_2781 at 3324.490 kb on + strand, within Echvi_2781 at 3324.490 kb on + strand, within Echvi_2781 at 3324.499 kb on + strand, within Echvi_2781 at 3324.499 kb on + strand, within Echvi_2781 at 3324.499 kb on + strand, within Echvi_2781 at 3324.500 kb on - strand, within Echvi_2781 at 3324.519 kb on + strand, within Echvi_2781 at 3324.532 kb on - strand, within Echvi_2781 at 3324.674 kb on - strand, within Echvi_2781 at 3324.686 kb on - strand, within Echvi_2781 at 3324.686 kb on - strand, within Echvi_2781 at 3324.697 kb on - strand, within Echvi_2781 at 3324.707 kb on + strand, within Echvi_2781 at 3324.749 kb on + strand, within Echvi_2781 at 3324.760 kb on - strand, within Echvi_2781 at 3324.800 kb on - strand, within Echvi_2781 at 3324.837 kb on + strand, within Echvi_2781 at 3324.837 kb on + strand, within Echvi_2781 at 3324.837 kb on + strand, within Echvi_2781 at 3324.837 kb on + strand, within Echvi_2781 at 3324.852 kb on + strand, within Echvi_2781 at 3324.953 kb on - strand at 3324.961 kb on - strand at 3325.021 kb on + strand at 3325.039 kb on - strand at 3325.067 kb on + strand at 3325.068 kb on - strand at 3325.068 kb on - strand at 3325.140 kb on + strand at 3325.196 kb on - strand at 3325.235 kb on - strand at 3325.253 kb on - strand at 3325.286 kb on - strand at 3325.324 kb on + strand at 3325.325 kb on - strand at 3325.325 kb on - strand at 3325.325 kb on - strand at 3325.357 kb on - strand at 3325.423 kb on + strand at 3325.433 kb on + strand at 3325.434 kb on - strand at 3325.434 kb on - strand at 3325.465 kb on + strand, within Echvi_2782 at 3325.465 kb on + strand, within Echvi_2782 at 3325.465 kb on + strand, within Echvi_2782 at 3325.465 kb on + strand, within Echvi_2782 at 3325.465 kb on + strand, within Echvi_2782 at 3325.465 kb on + strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.466 kb on - strand, within Echvi_2782 at 3325.493 kb on + strand, within Echvi_2782 at 3325.540 kb on + strand, within Echvi_2782 at 3325.597 kb on - strand, within Echvi_2782 at 3325.614 kb on + strand, within Echvi_2782 at 3325.620 kb on - strand, within Echvi_2782 at 3325.620 kb on - strand, within Echvi_2782 at 3325.733 kb on - strand, within Echvi_2782 at 3325.770 kb on + strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.772 kb on + strand, within Echvi_2782 at 3325.773 kb on - strand, within Echvi_2782 at 3325.773 kb on - strand, within Echvi_2782 at 3325.804 kb on + strand, within Echvi_2782 at 3325.804 kb on + strand, within Echvi_2782 at 3325.805 kb on - strand, within Echvi_2782 at 3325.813 kb on + strand, within Echvi_2782 at 3325.814 kb on - strand, within Echvi_2782 at 3325.814 kb on - strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.832 kb on + strand, within Echvi_2782 at 3325.837 kb on + strand, within Echvi_2782 at 3325.837 kb on + strand, within Echvi_2782 at 3325.838 kb on - strand, within Echvi_2782 at 3325.838 kb on - strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.846 kb on - strand, within Echvi_2782 at 3325.846 kb on - strand, within Echvi_2782 at 3325.898 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.903 kb on - strand, within Echvi_2782 at 3325.907 kb on + strand, within Echvi_2782 at 3325.907 kb on + strand, within Echvi_2782 at 3325.915 kb on - strand, within Echvi_2782 at 3325.919 kb on + strand, within Echvi_2782 at 3325.923 kb on + strand, within Echvi_2782 at 3325.923 kb on + strand, within Echvi_2782 at 3325.924 kb on - strand, within Echvi_2782 at 3325.924 kb on - strand, within Echvi_2782 at 3325.927 kb on - strand, within Echvi_2782 at 3325.985 kb on - strand, within Echvi_2782 at 3326.047 kb on - strand, within Echvi_2782 at 3326.072 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.094 kb on - strand, within Echvi_2782 at 3326.094 kb on - strand, within Echvi_2782 at 3326.097 kb on + strand, within Echvi_2782 at 3326.098 kb on - strand, within Echvi_2782 at 3326.104 kb on + strand, within Echvi_2782 at 3326.218 kb on + strand, within Echvi_2782 at 3326.219 kb on - strand, within Echvi_2782 at 3326.223 kb on - strand, within Echvi_2782 at 3326.223 kb on - strand, within Echvi_2782 at 3326.238 kb on + strand, within Echvi_2782 at 3326.304 kb on + strand, within Echvi_2782 at 3326.305 kb on - strand, within Echvi_2782 at 3326.308 kb on + strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.340 kb on + strand, within Echvi_2782 at 3326.340 kb on + strand, within Echvi_2782 at 3326.341 kb on - strand, within Echvi_2782 at 3326.414 kb on - strand at 3326.436 kb on + strand at 3326.437 kb on - strand at 3326.437 kb on - strand at 3326.485 kb on + strand at 3326.505 kb on - strand at 3326.517 kb on - strand at 3326.644 kb on + strand at 3326.645 kb on - strand at 3326.851 kb on + strand at 3327.183 kb on - strand, within Echvi_2783 at 3327.335 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.340 kb on + strand, within Echvi_2783 at 3327.340 kb on + strand, within Echvi_2783 at 3327.341 kb on - strand, within Echvi_2783 at 3327.341 kb on - strand, within Echvi_2783
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,324,323 + Echvi_2781 0.70 +0.9 3,324,323 + Echvi_2781 0.70 -0.3 3,324,324 - Echvi_2781 0.70 -1.4 3,324,328 + Echvi_2781 0.70 +0.3 3,324,328 + Echvi_2781 0.70 +0.4 3,324,328 + Echvi_2781 0.70 +0.2 3,324,329 - Echvi_2781 0.70 -0.9 3,324,329 - Echvi_2781 0.70 +0.0 3,324,462 + Echvi_2781 0.74 +0.3 3,324,463 - Echvi_2781 0.74 -0.3 3,324,463 - Echvi_2781 0.74 -0.8 3,324,463 - Echvi_2781 0.74 +0.4 3,324,463 - Echvi_2781 0.74 -0.4 3,324,463 - Echvi_2781 0.74 +0.2 3,324,463 - Echvi_2781 0.74 -0.1 3,324,463 - Echvi_2781 0.74 -0.1 3,324,490 + Echvi_2781 0.75 -0.3 3,324,490 + Echvi_2781 0.75 -1.0 3,324,499 + Echvi_2781 0.76 +0.9 3,324,499 + Echvi_2781 0.76 -0.1 3,324,499 + Echvi_2781 0.76 -1.6 3,324,500 - Echvi_2781 0.76 +0.6 3,324,519 + Echvi_2781 0.76 +0.1 3,324,532 - Echvi_2781 0.77 -1.1 3,324,674 - Echvi_2781 0.81 +0.1 3,324,686 - Echvi_2781 0.82 +0.5 3,324,686 - Echvi_2781 0.82 -0.4 3,324,697 - Echvi_2781 0.82 -0.5 3,324,707 + Echvi_2781 0.82 -0.6 3,324,749 + Echvi_2781 0.84 +0.3 3,324,760 - Echvi_2781 0.84 +0.1 3,324,800 - Echvi_2781 0.85 +1.2 3,324,837 + Echvi_2781 0.86 +0.2 3,324,837 + Echvi_2781 0.86 -0.8 3,324,837 + Echvi_2781 0.86 +0.0 3,324,837 + Echvi_2781 0.86 +1.3 3,324,852 + Echvi_2781 0.87 +0.7 3,324,953 - +1.2 3,324,961 - +0.1 3,325,021 + -0.1 3,325,039 - -0.3 3,325,067 + -0.2 3,325,068 - +2.5 3,325,068 - -0.2 3,325,140 + +0.0 3,325,196 - +0.9 3,325,235 - -0.3 3,325,253 - +1.2 3,325,286 - -0.3 3,325,324 + +1.2 3,325,325 - -0.2 3,325,325 - +0.1 3,325,325 - +0.3 3,325,357 - +0.1 3,325,423 + +1.2 3,325,433 + -0.3 3,325,434 - -0.2 3,325,434 - -0.8 3,325,465 + Echvi_2782 0.12 -0.9 3,325,465 + Echvi_2782 0.12 -0.8 3,325,465 + Echvi_2782 0.12 +1.1 3,325,465 + Echvi_2782 0.12 -0.1 3,325,465 + Echvi_2782 0.12 -0.8 3,325,465 + Echvi_2782 0.12 -0.2 3,325,466 - Echvi_2782 0.12 +0.3 3,325,466 - Echvi_2782 0.12 +0.1 3,325,466 - Echvi_2782 0.12 -0.1 3,325,466 - Echvi_2782 0.12 +0.1 3,325,466 - Echvi_2782 0.12 +0.9 3,325,466 - Echvi_2782 0.12 -0.3 3,325,466 - Echvi_2782 0.12 -1.0 3,325,466 - Echvi_2782 0.12 -0.1 3,325,466 - Echvi_2782 0.12 +0.8 3,325,493 + Echvi_2782 0.15 +1.0 3,325,540 + Echvi_2782 0.19 -1.0 3,325,597 - Echvi_2782 0.24 -0.4 3,325,614 + Echvi_2782 0.25 -0.3 3,325,620 - Echvi_2782 0.26 +0.6 3,325,620 - Echvi_2782 0.26 +0.9 3,325,733 - Echvi_2782 0.35 +2.5 3,325,770 + Echvi_2782 0.39 +0.3 3,325,771 - Echvi_2782 0.39 -0.1 3,325,771 - Echvi_2782 0.39 +1.2 3,325,771 - Echvi_2782 0.39 +0.0 3,325,772 + Echvi_2782 0.39 +0.7 3,325,773 - Echvi_2782 0.39 -1.2 3,325,773 - Echvi_2782 0.39 +0.6 3,325,804 + Echvi_2782 0.42 -1.0 3,325,804 + Echvi_2782 0.42 +0.0 3,325,805 - Echvi_2782 0.42 +0.2 3,325,813 + Echvi_2782 0.42 +0.8 3,325,814 - Echvi_2782 0.43 -0.2 3,325,814 - Echvi_2782 0.43 +0.3 3,325,827 + Echvi_2782 0.44 -0.2 3,325,827 + Echvi_2782 0.44 +0.5 3,325,827 + Echvi_2782 0.44 -0.4 3,325,832 + Echvi_2782 0.44 -0.8 3,325,837 + Echvi_2782 0.45 +0.3 3,325,837 + Echvi_2782 0.45 -0.4 3,325,838 - Echvi_2782 0.45 -0.9 3,325,838 - Echvi_2782 0.45 -0.3 3,325,845 + Echvi_2782 0.45 +0.5 3,325,845 + Echvi_2782 0.45 -0.6 3,325,845 + Echvi_2782 0.45 +0.0 3,325,845 + Echvi_2782 0.45 +0.5 3,325,845 + Echvi_2782 0.45 +0.0 3,325,845 + Echvi_2782 0.45 +0.3 3,325,845 + Echvi_2782 0.45 -0.6 3,325,845 + Echvi_2782 0.45 -0.6 3,325,846 - Echvi_2782 0.45 -0.4 3,325,846 - Echvi_2782 0.45 +1.2 3,325,898 + Echvi_2782 0.50 +0.5 3,325,902 + Echvi_2782 0.50 +0.3 3,325,902 + Echvi_2782 0.50 +0.1 3,325,902 + Echvi_2782 0.50 +0.5 3,325,903 - Echvi_2782 0.50 -1.3 3,325,907 + Echvi_2782 0.51 +0.3 3,325,907 + Echvi_2782 0.51 +0.1 3,325,915 - Echvi_2782 0.51 -0.6 3,325,919 + Echvi_2782 0.52 -1.0 3,325,923 + Echvi_2782 0.52 +0.0 3,325,923 + Echvi_2782 0.52 +0.5 3,325,924 - Echvi_2782 0.52 -1.2 3,325,924 - Echvi_2782 0.52 +1.2 3,325,927 - Echvi_2782 0.52 +0.7 3,325,985 - Echvi_2782 0.57 +0.7 3,326,047 - Echvi_2782 0.63 +0.0 3,326,072 + Echvi_2782 0.65 -1.5 3,326,093 + Echvi_2782 0.67 +0.8 3,326,093 + Echvi_2782 0.67 -1.6 3,326,093 + Echvi_2782 0.67 +0.7 3,326,094 - Echvi_2782 0.67 -0.9 3,326,094 - Echvi_2782 0.67 +0.1 3,326,097 + Echvi_2782 0.67 +0.8 3,326,098 - Echvi_2782 0.67 -1.8 3,326,104 + Echvi_2782 0.68 -0.0 3,326,218 + Echvi_2782 0.77 -0.4 3,326,219 - Echvi_2782 0.78 +0.4 3,326,223 - Echvi_2782 0.78 -0.5 3,326,223 - Echvi_2782 0.78 -1.1 3,326,238 + Echvi_2782 0.79 -1.1 3,326,304 + Echvi_2782 0.85 +0.3 3,326,305 - Echvi_2782 0.85 -0.3 3,326,308 + Echvi_2782 0.85 -0.8 3,326,309 - Echvi_2782 0.85 +0.2 3,326,309 - Echvi_2782 0.85 -0.6 3,326,309 - Echvi_2782 0.85 -0.2 3,326,340 + Echvi_2782 0.88 -0.2 3,326,340 + Echvi_2782 0.88 -1.9 3,326,341 - Echvi_2782 0.88 +0.4 3,326,414 - +0.2 3,326,436 + +0.4 3,326,437 - -1.1 3,326,437 - -0.7 3,326,485 + -0.4 3,326,505 - +0.6 3,326,517 - -0.7 3,326,644 + -0.4 3,326,645 - -0.7 3,326,851 + +1.1 3,327,183 - Echvi_2783 0.25 -0.3 3,327,335 + Echvi_2783 0.34 +1.2 3,327,337 + Echvi_2783 0.34 +1.0 3,327,337 + Echvi_2783 0.34 +0.5 3,327,337 + Echvi_2783 0.34 -0.3 3,327,338 - Echvi_2783 0.34 -0.0 3,327,338 - Echvi_2783 0.34 -2.2 3,327,338 - Echvi_2783 0.34 +0.6 3,327,338 - Echvi_2783 0.34 -1.0 3,327,338 - Echvi_2783 0.34 -0.6 3,327,338 - Echvi_2783 0.34 -1.4 3,327,340 + Echvi_2783 0.34 -0.3 3,327,340 + Echvi_2783 0.34 +0.7 3,327,341 - Echvi_2783 0.34 +0.9 3,327,341 - Echvi_2783 0.34 +2.1
Or see this region's nucleotide sequence