Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2435 and Echvi_2436 overlap by 4 nucleotides Echvi_2436 and Echvi_2437 are separated by 32 nucleotides
Echvi_2435: Echvi_2435 - Putative silver efflux pump, at 2,886,041 to 2,889,835
_2435
Echvi_2436: Echvi_2436 - Outer membrane protein, at 2,889,832 to 2,891,163
_2436
Echvi_2437: Echvi_2437 - RND family efflux transporter, MFP subunit, at 2,891,196 to 2,892,923
_2437
Position (kb)
2889
2890
2891
2892 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2888.866 kb on + strand, within Echvi_2435 at 2888.867 kb on - strand, within Echvi_2435 at 2888.867 kb on - strand, within Echvi_2435 at 2888.889 kb on - strand, within Echvi_2435 at 2888.889 kb on - strand, within Echvi_2435 at 2888.907 kb on - strand, within Echvi_2435 at 2888.941 kb on - strand, within Echvi_2435 at 2888.941 kb on - strand, within Echvi_2435 at 2888.960 kb on - strand, within Echvi_2435 at 2888.980 kb on - strand, within Echvi_2435 at 2889.060 kb on - strand, within Echvi_2435 at 2889.123 kb on - strand, within Echvi_2435 at 2889.243 kb on + strand, within Echvi_2435 at 2889.361 kb on - strand, within Echvi_2435 at 2889.516 kb on - strand at 2889.643 kb on - strand at 2889.661 kb on + strand at 2889.786 kb on + strand at 2889.831 kb on + strand at 2889.831 kb on + strand at 2889.845 kb on + strand at 2889.846 kb on - strand at 2889.849 kb on + strand at 2889.952 kb on + strand at 2889.957 kb on - strand at 2890.157 kb on + strand, within Echvi_2436 at 2890.157 kb on + strand, within Echvi_2436 at 2890.158 kb on - strand, within Echvi_2436 at 2890.158 kb on - strand, within Echvi_2436 at 2890.185 kb on - strand, within Echvi_2436 at 2890.238 kb on - strand, within Echvi_2436 at 2890.255 kb on + strand, within Echvi_2436 at 2890.255 kb on + strand, within Echvi_2436 at 2890.255 kb on + strand, within Echvi_2436 at 2890.258 kb on + strand at 2890.267 kb on + strand, within Echvi_2436 at 2890.268 kb on - strand, within Echvi_2436 at 2890.391 kb on + strand, within Echvi_2436 at 2890.392 kb on - strand, within Echvi_2436 at 2890.392 kb on - strand, within Echvi_2436 at 2890.442 kb on + strand, within Echvi_2436 at 2890.492 kb on - strand, within Echvi_2436 at 2890.504 kb on - strand, within Echvi_2436 at 2890.568 kb on + strand, within Echvi_2436 at 2890.568 kb on + strand, within Echvi_2436 at 2890.569 kb on - strand, within Echvi_2436 at 2890.689 kb on + strand, within Echvi_2436 at 2890.690 kb on - strand, within Echvi_2436 at 2890.693 kb on + strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.694 kb on - strand, within Echvi_2436 at 2890.695 kb on + strand, within Echvi_2436 at 2890.696 kb on - strand, within Echvi_2436 at 2890.774 kb on - strand, within Echvi_2436 at 2890.774 kb on - strand, within Echvi_2436 at 2890.823 kb on - strand, within Echvi_2436 at 2890.823 kb on - strand, within Echvi_2436 at 2890.852 kb on + strand, within Echvi_2436 at 2890.853 kb on - strand, within Echvi_2436 at 2890.853 kb on - strand, within Echvi_2436 at 2890.853 kb on - strand, within Echvi_2436 at 2890.898 kb on + strand, within Echvi_2436 at 2890.899 kb on - strand, within Echvi_2436 at 2890.899 kb on - strand, within Echvi_2436 at 2890.899 kb on - strand, within Echvi_2436 at 2890.899 kb on - strand, within Echvi_2436 at 2890.922 kb on - strand, within Echvi_2436 at 2890.960 kb on + strand, within Echvi_2436 at 2890.979 kb on + strand, within Echvi_2436 at 2891.155 kb on - strand at 2891.160 kb on - strand at 2891.186 kb on - strand at 2891.186 kb on - strand at 2891.189 kb on + strand at 2891.189 kb on + strand at 2891.189 kb on + strand at 2891.190 kb on - strand at 2891.190 kb on - strand at 2891.190 kb on - strand at 2891.190 kb on - strand at 2891.191 kb on + strand at 2891.191 kb on + strand at 2891.191 kb on + strand at 2891.192 kb on - strand at 2891.305 kb on - strand at 2891.419 kb on - strand, within Echvi_2437 at 2891.419 kb on - strand, within Echvi_2437 at 2891.419 kb on - strand, within Echvi_2437 at 2891.472 kb on - strand, within Echvi_2437 at 2891.581 kb on + strand, within Echvi_2437 at 2891.582 kb on - strand, within Echvi_2437 at 2891.590 kb on + strand, within Echvi_2437 at 2891.590 kb on + strand, within Echvi_2437 at 2891.590 kb on + strand, within Echvi_2437 at 2891.593 kb on - strand, within Echvi_2437 at 2891.593 kb on - strand, within Echvi_2437 at 2891.593 kb on - strand, within Echvi_2437 at 2891.644 kb on + strand, within Echvi_2437 at 2891.644 kb on + strand, within Echvi_2437 at 2891.645 kb on - strand, within Echvi_2437 at 2891.645 kb on - strand, within Echvi_2437 at 2891.646 kb on + strand, within Echvi_2437 at 2891.647 kb on - strand, within Echvi_2437 at 2891.660 kb on - strand, within Echvi_2437 at 2891.660 kb on - strand, within Echvi_2437 at 2891.744 kb on - strand, within Echvi_2437 at 2891.799 kb on + strand, within Echvi_2437 at 2891.816 kb on + strand, within Echvi_2437 at 2891.821 kb on - strand, within Echvi_2437 at 2891.871 kb on + strand, within Echvi_2437 at 2891.872 kb on - strand, within Echvi_2437 at 2891.872 kb on - strand, within Echvi_2437
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,888,866 + Echvi_2435 0.74 -0.8 2,888,867 - Echvi_2435 0.74 +0.7 2,888,867 - Echvi_2435 0.74 +0.3 2,888,889 - Echvi_2435 0.75 -0.2 2,888,889 - Echvi_2435 0.75 +0.2 2,888,907 - Echvi_2435 0.76 +0.8 2,888,941 - Echvi_2435 0.76 -0.4 2,888,941 - Echvi_2435 0.76 -0.6 2,888,960 - Echvi_2435 0.77 -0.2 2,888,980 - Echvi_2435 0.77 -0.3 2,889,060 - Echvi_2435 0.80 +0.1 2,889,123 - Echvi_2435 0.81 +1.1 2,889,243 + Echvi_2435 0.84 -0.3 2,889,361 - Echvi_2435 0.87 -1.6 2,889,516 - -0.3 2,889,643 - -0.0 2,889,661 + -0.4 2,889,786 + -0.1 2,889,831 + +1.4 2,889,831 + -0.9 2,889,845 + +1.1 2,889,846 - +1.7 2,889,849 + -2.3 2,889,952 + -0.0 2,889,957 - +0.6 2,890,157 + Echvi_2436 0.24 -1.9 2,890,157 + Echvi_2436 0.24 -1.8 2,890,158 - Echvi_2436 0.24 +0.0 2,890,158 - Echvi_2436 0.24 +0.0 2,890,185 - Echvi_2436 0.27 +0.0 2,890,238 - Echvi_2436 0.30 -0.1 2,890,255 + Echvi_2436 0.32 -0.8 2,890,255 + Echvi_2436 0.32 -0.6 2,890,255 + Echvi_2436 0.32 -1.0 2,890,258 + +1.0 2,890,267 + Echvi_2436 0.33 +2.3 2,890,268 - Echvi_2436 0.33 -0.3 2,890,391 + Echvi_2436 0.42 +0.2 2,890,392 - Echvi_2436 0.42 -0.4 2,890,392 - Echvi_2436 0.42 -0.3 2,890,442 + Echvi_2436 0.46 -3.0 2,890,492 - Echvi_2436 0.50 +0.5 2,890,504 - Echvi_2436 0.50 +0.2 2,890,568 + Echvi_2436 0.55 -0.4 2,890,568 + Echvi_2436 0.55 -1.0 2,890,569 - Echvi_2436 0.55 +0.4 2,890,689 + Echvi_2436 0.64 -2.5 2,890,690 - Echvi_2436 0.64 +1.2 2,890,693 + Echvi_2436 0.65 -1.8 2,890,694 - Echvi_2436 0.65 -1.0 2,890,694 - Echvi_2436 0.65 -1.0 2,890,694 - Echvi_2436 0.65 +0.5 2,890,694 - Echvi_2436 0.65 -0.1 2,890,694 - Echvi_2436 0.65 +0.4 2,890,694 - Echvi_2436 0.65 -0.4 2,890,694 - Echvi_2436 0.65 +1.0 2,890,695 + Echvi_2436 0.65 +1.0 2,890,696 - Echvi_2436 0.65 -0.5 2,890,774 - Echvi_2436 0.71 -0.5 2,890,774 - Echvi_2436 0.71 -1.3 2,890,823 - Echvi_2436 0.74 +0.3 2,890,823 - Echvi_2436 0.74 +1.1 2,890,852 + Echvi_2436 0.77 -2.0 2,890,853 - Echvi_2436 0.77 +0.1 2,890,853 - Echvi_2436 0.77 +0.5 2,890,853 - Echvi_2436 0.77 -0.2 2,890,898 + Echvi_2436 0.80 +0.7 2,890,899 - Echvi_2436 0.80 +0.1 2,890,899 - Echvi_2436 0.80 +0.0 2,890,899 - Echvi_2436 0.80 -0.4 2,890,899 - Echvi_2436 0.80 -0.2 2,890,922 - Echvi_2436 0.82 +0.2 2,890,960 + Echvi_2436 0.85 -1.2 2,890,979 + Echvi_2436 0.86 -2.4 2,891,155 - +0.2 2,891,160 - +0.6 2,891,186 - -0.1 2,891,186 - -0.2 2,891,189 + -2.6 2,891,189 + -0.7 2,891,189 + +0.3 2,891,190 - +0.1 2,891,190 - +0.9 2,891,190 - +0.8 2,891,190 - +0.7 2,891,191 + +1.0 2,891,191 + -1.0 2,891,191 + -1.4 2,891,192 - +1.7 2,891,305 - +0.2 2,891,419 - Echvi_2437 0.13 +0.2 2,891,419 - Echvi_2437 0.13 +0.1 2,891,419 - Echvi_2437 0.13 -0.6 2,891,472 - Echvi_2437 0.16 -0.2 2,891,581 + Echvi_2437 0.22 -0.4 2,891,582 - Echvi_2437 0.22 +1.0 2,891,590 + Echvi_2437 0.23 +0.6 2,891,590 + Echvi_2437 0.23 -1.5 2,891,590 + Echvi_2437 0.23 -2.1 2,891,593 - Echvi_2437 0.23 +0.4 2,891,593 - Echvi_2437 0.23 -0.3 2,891,593 - Echvi_2437 0.23 -1.1 2,891,644 + Echvi_2437 0.26 -0.6 2,891,644 + Echvi_2437 0.26 -1.0 2,891,645 - Echvi_2437 0.26 -0.8 2,891,645 - Echvi_2437 0.26 -1.5 2,891,646 + Echvi_2437 0.26 -0.6 2,891,647 - Echvi_2437 0.26 -0.0 2,891,660 - Echvi_2437 0.27 -0.8 2,891,660 - Echvi_2437 0.27 -0.9 2,891,744 - Echvi_2437 0.32 +0.2 2,891,799 + Echvi_2437 0.35 +0.6 2,891,816 + Echvi_2437 0.36 -0.5 2,891,821 - Echvi_2437 0.36 -0.2 2,891,871 + Echvi_2437 0.39 -0.9 2,891,872 - Echvi_2437 0.39 +0.4 2,891,872 - Echvi_2437 0.39 +0.5
Or see this region's nucleotide sequence