Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3454 and EX28DRAFT_3455 are separated by 14 nucleotides EX28DRAFT_3455 and EX28DRAFT_3456 are separated by 226 nucleotides
EX28DRAFT_3454: EX28DRAFT_3454 - Dihydrodipicolinate synthase/N-acetylneuraminate lyase, at 126,722 to 127,630
_3454
EX28DRAFT_3455: EX28DRAFT_3455 - putative dehydratase, YjhG/YagF family, at 127,645 to 129,612
_3455
EX28DRAFT_3456: EX28DRAFT_3456 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 129,839 to 131,221
_3456
Position (kb) 127
128
129
130 Strain fitness (log2 ratio) -1
0
1 at 126.653 kb on + strand at 126.653 kb on + strand at 126.654 kb on - strand at 126.654 kb on - strand at 126.656 kb on + strand at 126.656 kb on + strand at 126.656 kb on + strand at 126.657 kb on - strand at 126.657 kb on - strand at 126.657 kb on - strand at 126.657 kb on - strand at 126.904 kb on + strand, within EX28DRAFT_3454 at 127.052 kb on + strand, within EX28DRAFT_3454 at 127.055 kb on + strand, within EX28DRAFT_3454 at 127.056 kb on - strand, within EX28DRAFT_3454 at 127.134 kb on - strand, within EX28DRAFT_3454 at 127.135 kb on + strand, within EX28DRAFT_3454 at 127.135 kb on + strand, within EX28DRAFT_3454 at 127.180 kb on - strand, within EX28DRAFT_3454 at 127.208 kb on - strand, within EX28DRAFT_3454 at 127.208 kb on - strand, within EX28DRAFT_3454 at 127.327 kb on + strand, within EX28DRAFT_3454 at 127.327 kb on + strand, within EX28DRAFT_3454 at 127.443 kb on - strand, within EX28DRAFT_3454 at 127.475 kb on + strand, within EX28DRAFT_3454 at 128.580 kb on - strand, within EX28DRAFT_3455 at 128.580 kb on - strand, within EX28DRAFT_3455 at 129.043 kb on + strand, within EX28DRAFT_3455 at 129.093 kb on + strand, within EX28DRAFT_3455 at 129.181 kb on + strand, within EX28DRAFT_3455 at 129.208 kb on - strand, within EX28DRAFT_3455 at 129.208 kb on - strand, within EX28DRAFT_3455 at 129.350 kb on + strand, within EX28DRAFT_3455 at 129.371 kb on + strand, within EX28DRAFT_3455 at 129.819 kb on + strand at 129.820 kb on - strand at 129.824 kb on - strand at 129.850 kb on - strand at 129.969 kb on + strand at 130.163 kb on + strand, within EX28DRAFT_3456 at 130.163 kb on + strand, within EX28DRAFT_3456 at 130.163 kb on + strand, within EX28DRAFT_3456 at 130.163 kb on + strand, within EX28DRAFT_3456 at 130.163 kb on + strand, within EX28DRAFT_3456 at 130.164 kb on - strand, within EX28DRAFT_3456 at 130.164 kb on - strand, within EX28DRAFT_3456 at 130.178 kb on + strand, within EX28DRAFT_3456 at 130.178 kb on + strand, within EX28DRAFT_3456 at 130.178 kb on + strand, within EX28DRAFT_3456 at 130.179 kb on - strand, within EX28DRAFT_3456 at 130.179 kb on - strand, within EX28DRAFT_3456 at 130.424 kb on + strand, within EX28DRAFT_3456 at 130.445 kb on - strand, within EX28DRAFT_3456 at 130.531 kb on + strand, within EX28DRAFT_3456 at 130.532 kb on - strand, within EX28DRAFT_3456 at 130.532 kb on - strand, within EX28DRAFT_3456 at 130.604 kb on + strand, within EX28DRAFT_3456 at 130.604 kb on + strand, within EX28DRAFT_3456 at 130.604 kb on + strand, within EX28DRAFT_3456
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 126,653 + +0.4 126,653 + -0.0 126,654 - -0.5 126,654 - -0.1 126,656 + +0.5 126,656 + +0.0 126,656 + -0.6 126,657 - -0.6 126,657 - +0.5 126,657 - -0.0 126,657 - +0.0 126,904 + EX28DRAFT_3454 0.20 -0.3 127,052 + EX28DRAFT_3454 0.36 +0.4 127,055 + EX28DRAFT_3454 0.37 -0.7 127,056 - EX28DRAFT_3454 0.37 -0.1 127,134 - EX28DRAFT_3454 0.45 -0.2 127,135 + EX28DRAFT_3454 0.45 -0.2 127,135 + EX28DRAFT_3454 0.45 +0.2 127,180 - EX28DRAFT_3454 0.50 +0.0 127,208 - EX28DRAFT_3454 0.53 +0.0 127,208 - EX28DRAFT_3454 0.53 -0.1 127,327 + EX28DRAFT_3454 0.67 -0.1 127,327 + EX28DRAFT_3454 0.67 -0.3 127,443 - EX28DRAFT_3454 0.79 -0.0 127,475 + EX28DRAFT_3454 0.83 +0.4 128,580 - EX28DRAFT_3455 0.48 +0.5 128,580 - EX28DRAFT_3455 0.48 +1.2 129,043 + EX28DRAFT_3455 0.71 -0.1 129,093 + EX28DRAFT_3455 0.74 +0.1 129,181 + EX28DRAFT_3455 0.78 +0.2 129,208 - EX28DRAFT_3455 0.79 -0.5 129,208 - EX28DRAFT_3455 0.79 -0.0 129,350 + EX28DRAFT_3455 0.87 +0.3 129,371 + EX28DRAFT_3455 0.88 +0.2 129,819 + +0.2 129,820 - -0.2 129,824 - -0.1 129,850 - +0.0 129,969 + +0.1 130,163 + EX28DRAFT_3456 0.23 +0.1 130,163 + EX28DRAFT_3456 0.23 +0.6 130,163 + EX28DRAFT_3456 0.23 +0.0 130,163 + EX28DRAFT_3456 0.23 +0.4 130,163 + EX28DRAFT_3456 0.23 -0.1 130,164 - EX28DRAFT_3456 0.23 -0.0 130,164 - EX28DRAFT_3456 0.23 +0.0 130,178 + EX28DRAFT_3456 0.25 +0.1 130,178 + EX28DRAFT_3456 0.25 -0.2 130,178 + EX28DRAFT_3456 0.25 -0.1 130,179 - EX28DRAFT_3456 0.25 -0.5 130,179 - EX28DRAFT_3456 0.25 +0.0 130,424 + EX28DRAFT_3456 0.42 -0.1 130,445 - EX28DRAFT_3456 0.44 -0.0 130,531 + EX28DRAFT_3456 0.50 +0.4 130,532 - EX28DRAFT_3456 0.50 +0.2 130,532 - EX28DRAFT_3456 0.50 +0.7 130,604 + EX28DRAFT_3456 0.55 -0.1 130,604 + EX28DRAFT_3456 0.55 -0.2 130,604 + EX28DRAFT_3456 0.55 -0.4
Or see this region's nucleotide sequence