Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3290 and EX28DRAFT_3291 are separated by 90 nucleotides EX28DRAFT_3291 and EX28DRAFT_3292 are separated by 5 nucleotides EX28DRAFT_3292 and EX28DRAFT_3293 are separated by 7 nucleotides
EX28DRAFT_3290: EX28DRAFT_3290 - succinate-semialdehyde dehydrogenase, at 585,983 to 587,437
_3290
EX28DRAFT_3291: EX28DRAFT_3291 - Predicted membrane protein, at 587,528 to 589,495
_3291
EX28DRAFT_3292: EX28DRAFT_3292 - RND family efflux transporter, MFP subunit, at 589,501 to 590,433
_3292
EX28DRAFT_3293: EX28DRAFT_3293 - Protein of unknown function (DUF1656), at 590,441 to 590,644
_3293
Position (kb) 587
588
589
590 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 586.651 kb on - strand, within EX28DRAFT_3290 at 586.753 kb on + strand, within EX28DRAFT_3290 at 586.798 kb on + strand, within EX28DRAFT_3290 at 586.798 kb on + strand, within EX28DRAFT_3290 at 586.799 kb on - strand, within EX28DRAFT_3290 at 586.799 kb on - strand, within EX28DRAFT_3290 at 586.855 kb on + strand, within EX28DRAFT_3290 at 586.856 kb on - strand, within EX28DRAFT_3290 at 587.197 kb on - strand, within EX28DRAFT_3290 at 587.197 kb on - strand, within EX28DRAFT_3290 at 587.275 kb on + strand, within EX28DRAFT_3290 at 587.314 kb on + strand at 587.315 kb on - strand at 587.360 kb on - strand at 587.460 kb on - strand at 587.460 kb on - strand at 587.476 kb on - strand at 587.476 kb on - strand at 587.479 kb on + strand at 587.479 kb on + strand at 587.480 kb on - strand at 587.480 kb on - strand at 587.480 kb on - strand at 587.480 kb on - strand at 587.480 kb on - strand at 587.482 kb on - strand at 587.520 kb on + strand at 587.566 kb on + strand at 587.634 kb on + strand at 587.663 kb on - strand at 587.668 kb on - strand at 587.668 kb on - strand at 587.868 kb on + strand, within EX28DRAFT_3291 at 587.869 kb on - strand, within EX28DRAFT_3291 at 587.912 kb on - strand, within EX28DRAFT_3291 at 587.996 kb on + strand, within EX28DRAFT_3291 at 588.181 kb on + strand, within EX28DRAFT_3291 at 588.181 kb on + strand, within EX28DRAFT_3291 at 588.234 kb on + strand, within EX28DRAFT_3291 at 588.293 kb on - strand, within EX28DRAFT_3291 at 588.573 kb on + strand, within EX28DRAFT_3291 at 588.574 kb on - strand, within EX28DRAFT_3291 at 588.574 kb on - strand, within EX28DRAFT_3291 at 588.574 kb on - strand, within EX28DRAFT_3291 at 588.574 kb on - strand, within EX28DRAFT_3291 at 588.632 kb on - strand, within EX28DRAFT_3291 at 588.640 kb on + strand, within EX28DRAFT_3291 at 588.641 kb on - strand, within EX28DRAFT_3291 at 588.781 kb on + strand, within EX28DRAFT_3291 at 588.782 kb on - strand, within EX28DRAFT_3291 at 588.823 kb on + strand, within EX28DRAFT_3291 at 588.824 kb on - strand, within EX28DRAFT_3291 at 588.824 kb on - strand, within EX28DRAFT_3291 at 588.863 kb on + strand, within EX28DRAFT_3291 at 588.884 kb on - strand, within EX28DRAFT_3291 at 588.911 kb on - strand, within EX28DRAFT_3291 at 588.933 kb on + strand, within EX28DRAFT_3291 at 589.103 kb on - strand, within EX28DRAFT_3291 at 589.118 kb on - strand, within EX28DRAFT_3291 at 589.140 kb on + strand, within EX28DRAFT_3291 at 589.240 kb on + strand, within EX28DRAFT_3291 at 589.240 kb on + strand, within EX28DRAFT_3291 at 589.240 kb on + strand, within EX28DRAFT_3291 at 589.241 kb on - strand, within EX28DRAFT_3291 at 589.241 kb on - strand, within EX28DRAFT_3291 at 589.641 kb on + strand, within EX28DRAFT_3292 at 589.641 kb on + strand, within EX28DRAFT_3292 at 589.641 kb on + strand, within EX28DRAFT_3292 at 589.642 kb on - strand, within EX28DRAFT_3292 at 589.646 kb on - strand, within EX28DRAFT_3292 at 589.731 kb on + strand, within EX28DRAFT_3292 at 589.732 kb on - strand, within EX28DRAFT_3292 at 589.847 kb on + strand, within EX28DRAFT_3292 at 589.860 kb on - strand, within EX28DRAFT_3292 at 589.923 kb on - strand, within EX28DRAFT_3292 at 590.145 kb on - strand, within EX28DRAFT_3292 at 590.147 kb on + strand, within EX28DRAFT_3292 at 590.147 kb on + strand, within EX28DRAFT_3292 at 590.263 kb on - strand, within EX28DRAFT_3292 at 590.342 kb on + strand at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.481 kb on + strand, within EX28DRAFT_3293 at 590.482 kb on - strand, within EX28DRAFT_3293
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 586,651 - EX28DRAFT_3290 0.46 -0.9 586,753 + EX28DRAFT_3290 0.53 -0.6 586,798 + EX28DRAFT_3290 0.56 +0.1 586,798 + EX28DRAFT_3290 0.56 -0.2 586,799 - EX28DRAFT_3290 0.56 -0.2 586,799 - EX28DRAFT_3290 0.56 +0.1 586,855 + EX28DRAFT_3290 0.60 -0.3 586,856 - EX28DRAFT_3290 0.60 +0.4 587,197 - EX28DRAFT_3290 0.83 -0.2 587,197 - EX28DRAFT_3290 0.83 -0.2 587,275 + EX28DRAFT_3290 0.89 +0.1 587,314 + -0.2 587,315 - -0.1 587,360 - -0.3 587,460 - -0.9 587,460 - +0.2 587,476 - -0.2 587,476 - -3.5 587,479 + -0.0 587,479 + +0.4 587,480 - -0.1 587,480 - -0.2 587,480 - +0.3 587,480 - +0.0 587,480 - -0.8 587,482 - +0.3 587,520 + -0.4 587,566 + +0.4 587,634 + +0.2 587,663 - +1.0 587,668 - +0.2 587,668 - +0.7 587,868 + EX28DRAFT_3291 0.17 +0.2 587,869 - EX28DRAFT_3291 0.17 -0.1 587,912 - EX28DRAFT_3291 0.20 +0.1 587,996 + EX28DRAFT_3291 0.24 +0.0 588,181 + EX28DRAFT_3291 0.33 +0.2 588,181 + EX28DRAFT_3291 0.33 +0.2 588,234 + EX28DRAFT_3291 0.36 -1.2 588,293 - EX28DRAFT_3291 0.39 -0.2 588,573 + EX28DRAFT_3291 0.53 -0.2 588,574 - EX28DRAFT_3291 0.53 +1.5 588,574 - EX28DRAFT_3291 0.53 +0.3 588,574 - EX28DRAFT_3291 0.53 -1.2 588,574 - EX28DRAFT_3291 0.53 -0.3 588,632 - EX28DRAFT_3291 0.56 +0.6 588,640 + EX28DRAFT_3291 0.57 -0.4 588,641 - EX28DRAFT_3291 0.57 -0.2 588,781 + EX28DRAFT_3291 0.64 +0.3 588,782 - EX28DRAFT_3291 0.64 -0.5 588,823 + EX28DRAFT_3291 0.66 +0.3 588,824 - EX28DRAFT_3291 0.66 -0.5 588,824 - EX28DRAFT_3291 0.66 +0.2 588,863 + EX28DRAFT_3291 0.68 -0.4 588,884 - EX28DRAFT_3291 0.69 +1.5 588,911 - EX28DRAFT_3291 0.70 +0.1 588,933 + EX28DRAFT_3291 0.71 -0.6 589,103 - EX28DRAFT_3291 0.80 -0.6 589,118 - EX28DRAFT_3291 0.81 -0.0 589,140 + EX28DRAFT_3291 0.82 -1.0 589,240 + EX28DRAFT_3291 0.87 +0.0 589,240 + EX28DRAFT_3291 0.87 -0.2 589,240 + EX28DRAFT_3291 0.87 -2.8 589,241 - EX28DRAFT_3291 0.87 +0.2 589,241 - EX28DRAFT_3291 0.87 -0.1 589,641 + EX28DRAFT_3292 0.15 +0.1 589,641 + EX28DRAFT_3292 0.15 +0.1 589,641 + EX28DRAFT_3292 0.15 +0.1 589,642 - EX28DRAFT_3292 0.15 -0.2 589,646 - EX28DRAFT_3292 0.16 -0.5 589,731 + EX28DRAFT_3292 0.25 +0.4 589,732 - EX28DRAFT_3292 0.25 -0.2 589,847 + EX28DRAFT_3292 0.37 +1.3 589,860 - EX28DRAFT_3292 0.38 +0.1 589,923 - EX28DRAFT_3292 0.45 -0.4 590,145 - EX28DRAFT_3292 0.69 +0.2 590,147 + EX28DRAFT_3292 0.69 +0.3 590,147 + EX28DRAFT_3292 0.69 -0.2 590,263 - EX28DRAFT_3292 0.82 -0.2 590,342 + +0.0 590,481 + EX28DRAFT_3293 0.20 +0.8 590,481 + EX28DRAFT_3293 0.20 -0.7 590,481 + EX28DRAFT_3293 0.20 +0.8 590,481 + EX28DRAFT_3293 0.20 +0.6 590,481 + EX28DRAFT_3293 0.20 +0.9 590,481 + EX28DRAFT_3293 0.20 +0.1 590,482 - EX28DRAFT_3293 0.20 +0.0
Or see this region's nucleotide sequence