Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2898 and EX28DRAFT_2899 overlap by 16 nucleotides EX28DRAFT_2899 and EX28DRAFT_2900 are separated by 14 nucleotides EX28DRAFT_2900 and EX28DRAFT_2901 overlap by 4 nucleotides EX28DRAFT_2901 and EX28DRAFT_2902 are separated by 184 nucleotides EX28DRAFT_2902 and EX28DRAFT_2903 are separated by 6 nucleotides
EX28DRAFT_2898: EX28DRAFT_2898 - prepilin-type N-terminal cleavage/methylation domain, at 210,187 to 210,510
_2898
EX28DRAFT_2899: EX28DRAFT_2899 - Protein of unknown function (DUF2509), at 210,495 to 210,878
_2899
EX28DRAFT_2900: EX28DRAFT_2900 - prepilin-type N-terminal cleavage/methylation domain, at 210,893 to 211,447
_2900
EX28DRAFT_2901: EX28DRAFT_2901 - prepilin-type N-terminal cleavage/methylation domain, at 211,444 to 211,908
_2901
EX28DRAFT_2902: EX28DRAFT_2902 - thymidylate synthase, at 212,093 to 212,887
_2902
EX28DRAFT_2903: EX28DRAFT_2903 - prolipoprotein diacylglyceryl transferase, at 212,894 to 213,769
_2903
Position (kb) 211
212 Strain fitness (log2 ratio) -1
0
1 at 210.463 kb on + strand, within EX28DRAFT_2898 at 210.464 kb on - strand, within EX28DRAFT_2898 at 210.477 kb on + strand, within EX28DRAFT_2898 at 210.904 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.919 kb on - strand at 210.952 kb on + strand, within EX28DRAFT_2900 at 210.953 kb on - strand, within EX28DRAFT_2900 at 210.953 kb on - strand, within EX28DRAFT_2900 at 210.956 kb on - strand, within EX28DRAFT_2900 at 211.033 kb on + strand, within EX28DRAFT_2900 at 211.033 kb on + strand, within EX28DRAFT_2900 at 211.254 kb on + strand, within EX28DRAFT_2900 at 211.385 kb on + strand, within EX28DRAFT_2900 at 211.397 kb on - strand at 211.473 kb on + strand at 211.507 kb on - strand, within EX28DRAFT_2901 at 211.574 kb on + strand, within EX28DRAFT_2901 at 211.575 kb on - strand, within EX28DRAFT_2901 at 211.710 kb on + strand, within EX28DRAFT_2901 at 211.711 kb on - strand, within EX28DRAFT_2901 at 211.887 kb on + strand at 211.961 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 210,463 + EX28DRAFT_2898 0.85 +0.1 210,464 - EX28DRAFT_2898 0.85 -1.2 210,477 + EX28DRAFT_2898 0.90 +0.2 210,904 - +0.7 210,919 - +1.3 210,919 - -0.8 210,919 - -0.5 210,919 - +0.0 210,919 - -0.0 210,919 - +1.0 210,919 - +0.1 210,952 + EX28DRAFT_2900 0.11 +1.2 210,953 - EX28DRAFT_2900 0.11 -0.4 210,953 - EX28DRAFT_2900 0.11 +0.1 210,956 - EX28DRAFT_2900 0.11 -0.0 211,033 + EX28DRAFT_2900 0.25 -0.4 211,033 + EX28DRAFT_2900 0.25 +0.6 211,254 + EX28DRAFT_2900 0.65 -0.3 211,385 + EX28DRAFT_2900 0.89 -0.5 211,397 - +0.2 211,473 + +0.3 211,507 - EX28DRAFT_2901 0.14 -0.8 211,574 + EX28DRAFT_2901 0.28 -0.0 211,575 - EX28DRAFT_2901 0.28 -0.9 211,710 + EX28DRAFT_2901 0.57 -0.3 211,711 - EX28DRAFT_2901 0.57 -0.5 211,887 + +0.0 211,961 + -0.2
Or see this region's nucleotide sequence