Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2623 and EX28DRAFT_2624 are separated by 397 nucleotides EX28DRAFT_2624 and EX28DRAFT_2625 are separated by 23 nucleotides EX28DRAFT_2625 and EX28DRAFT_2626 are separated by 13 nucleotides
EX28DRAFT_2623: EX28DRAFT_2623 - Enolase, at 2,661,692 to 2,662,963
_2623
EX28DRAFT_2624: EX28DRAFT_2624 - Phosphotransferase enzyme family, at 2,663,361 to 2,664,416
_2624
EX28DRAFT_2625: EX28DRAFT_2625 - Peptidase family U32, at 2,664,440 to 2,665,378
_2625
EX28DRAFT_2626: EX28DRAFT_2626 - hypothetical protein, at 2,665,392 to 2,666,168
_2626
Position (kb)
2663
2664
2665 Strain fitness (log2 ratio)
-2
-1
0
1 at 2662.443 kb on + strand, within EX28DRAFT_2623 at 2662.472 kb on + strand, within EX28DRAFT_2623 at 2662.473 kb on - strand, within EX28DRAFT_2623 at 2662.555 kb on + strand, within EX28DRAFT_2623 at 2662.673 kb on + strand, within EX28DRAFT_2623 at 2662.673 kb on + strand, within EX28DRAFT_2623 at 2662.673 kb on + strand, within EX28DRAFT_2623 at 2662.781 kb on + strand, within EX28DRAFT_2623 at 2662.852 kb on + strand at 2662.938 kb on - strand at 2662.996 kb on + strand at 2663.001 kb on - strand at 2663.068 kb on - strand at 2663.273 kb on + strand at 2663.330 kb on - strand at 2663.436 kb on + strand at 2663.524 kb on + strand, within EX28DRAFT_2624 at 2663.741 kb on - strand, within EX28DRAFT_2624 at 2663.800 kb on + strand, within EX28DRAFT_2624 at 2663.816 kb on - strand, within EX28DRAFT_2624 at 2663.865 kb on + strand, within EX28DRAFT_2624 at 2663.919 kb on + strand, within EX28DRAFT_2624 at 2663.922 kb on - strand, within EX28DRAFT_2624 at 2664.011 kb on - strand, within EX28DRAFT_2624 at 2664.265 kb on + strand, within EX28DRAFT_2624 at 2664.439 kb on + strand at 2664.476 kb on - strand at 2664.725 kb on + strand, within EX28DRAFT_2625 at 2664.769 kb on + strand, within EX28DRAFT_2625 at 2664.770 kb on - strand, within EX28DRAFT_2625 at 2664.900 kb on - strand, within EX28DRAFT_2625 at 2664.962 kb on - strand, within EX28DRAFT_2625 at 2664.970 kb on + strand, within EX28DRAFT_2625 at 2665.003 kb on + strand, within EX28DRAFT_2625 at 2665.006 kb on + strand, within EX28DRAFT_2625 at 2665.045 kb on + strand, within EX28DRAFT_2625 at 2665.045 kb on + strand, within EX28DRAFT_2625 at 2665.045 kb on + strand, within EX28DRAFT_2625 at 2665.046 kb on - strand, within EX28DRAFT_2625 at 2665.046 kb on - strand, within EX28DRAFT_2625 at 2665.048 kb on + strand, within EX28DRAFT_2625 at 2665.048 kb on + strand, within EX28DRAFT_2625 at 2665.048 kb on + strand, within EX28DRAFT_2625 at 2665.079 kb on + strand, within EX28DRAFT_2625 at 2665.134 kb on - strand, within EX28DRAFT_2625 at 2665.134 kb on - strand, within EX28DRAFT_2625 at 2665.152 kb on - strand, within EX28DRAFT_2625 at 2665.152 kb on - strand, within EX28DRAFT_2625 at 2665.163 kb on + strand, within EX28DRAFT_2625 at 2665.202 kb on + strand, within EX28DRAFT_2625 at 2665.327 kb on - strand at 2665.376 kb on + strand at 2665.377 kb on - strand at 2665.377 kb on - strand at 2665.377 kb on - strand at 2665.399 kb on + strand at 2665.400 kb on - strand at 2665.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,662,443 + EX28DRAFT_2623 0.59 -2.3 2,662,472 + EX28DRAFT_2623 0.61 -0.2 2,662,473 - EX28DRAFT_2623 0.61 +0.4 2,662,555 + EX28DRAFT_2623 0.68 +0.1 2,662,673 + EX28DRAFT_2623 0.77 -0.1 2,662,673 + EX28DRAFT_2623 0.77 +0.0 2,662,673 + EX28DRAFT_2623 0.77 +0.2 2,662,781 + EX28DRAFT_2623 0.86 +0.0 2,662,852 + -1.3 2,662,938 - -0.2 2,662,996 + -0.2 2,663,001 - +0.6 2,663,068 - +0.0 2,663,273 + +0.4 2,663,330 - -1.5 2,663,436 + -0.1 2,663,524 + EX28DRAFT_2624 0.15 +0.2 2,663,741 - EX28DRAFT_2624 0.36 -0.5 2,663,800 + EX28DRAFT_2624 0.42 -0.8 2,663,816 - EX28DRAFT_2624 0.43 +0.1 2,663,865 + EX28DRAFT_2624 0.48 -0.9 2,663,919 + EX28DRAFT_2624 0.53 -0.6 2,663,922 - EX28DRAFT_2624 0.53 -0.4 2,664,011 - EX28DRAFT_2624 0.62 -0.5 2,664,265 + EX28DRAFT_2624 0.86 +0.5 2,664,439 + +0.2 2,664,476 - -0.6 2,664,725 + EX28DRAFT_2625 0.30 -0.3 2,664,769 + EX28DRAFT_2625 0.35 -0.7 2,664,770 - EX28DRAFT_2625 0.35 +0.3 2,664,900 - EX28DRAFT_2625 0.49 -0.1 2,664,962 - EX28DRAFT_2625 0.56 -0.1 2,664,970 + EX28DRAFT_2625 0.56 -0.5 2,665,003 + EX28DRAFT_2625 0.60 +0.5 2,665,006 + EX28DRAFT_2625 0.60 -0.2 2,665,045 + EX28DRAFT_2625 0.64 +0.2 2,665,045 + EX28DRAFT_2625 0.64 +0.1 2,665,045 + EX28DRAFT_2625 0.64 +0.0 2,665,046 - EX28DRAFT_2625 0.65 +0.7 2,665,046 - EX28DRAFT_2625 0.65 +0.3 2,665,048 + EX28DRAFT_2625 0.65 -0.4 2,665,048 + EX28DRAFT_2625 0.65 -0.1 2,665,048 + EX28DRAFT_2625 0.65 -1.7 2,665,079 + EX28DRAFT_2625 0.68 +0.2 2,665,134 - EX28DRAFT_2625 0.74 -0.3 2,665,134 - EX28DRAFT_2625 0.74 +0.5 2,665,152 - EX28DRAFT_2625 0.76 -1.0 2,665,152 - EX28DRAFT_2625 0.76 +0.6 2,665,163 + EX28DRAFT_2625 0.77 +1.2 2,665,202 + EX28DRAFT_2625 0.81 +0.3 2,665,327 - +0.0 2,665,376 + +0.5 2,665,377 - +0.0 2,665,377 - -0.1 2,665,377 - -0.4 2,665,399 + -1.9 2,665,400 - -0.2 2,665,400 - -0.4
Or see this region's nucleotide sequence