Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2569 and EX28DRAFT_2570 overlap by 4 nucleotides EX28DRAFT_2570 and EX28DRAFT_2571 are separated by 88 nucleotides
EX28DRAFT_2569: EX28DRAFT_2569 - Protein of unknown function (DUF3999), at 2,599,560 to 2,600,945
_2569
EX28DRAFT_2570: EX28DRAFT_2570 - Predicted membrane protein, at 2,600,942 to 2,603,557
_2570
EX28DRAFT_2571: EX28DRAFT_2571 - Glycosidases, at 2,603,646 to 2,605,472
_2571
Position (kb)
2600
2601
2602
2603
2604 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2600.286 kb on - strand, within EX28DRAFT_2569 at 2600.333 kb on + strand, within EX28DRAFT_2569 at 2600.334 kb on - strand, within EX28DRAFT_2569 at 2600.387 kb on + strand, within EX28DRAFT_2569 at 2600.387 kb on + strand, within EX28DRAFT_2569 at 2600.399 kb on + strand, within EX28DRAFT_2569 at 2600.414 kb on - strand, within EX28DRAFT_2569 at 2600.453 kb on + strand, within EX28DRAFT_2569 at 2600.768 kb on + strand, within EX28DRAFT_2569 at 2600.768 kb on + strand, within EX28DRAFT_2569 at 2600.769 kb on - strand, within EX28DRAFT_2569 at 2600.829 kb on - strand at 2600.852 kb on - strand at 2601.073 kb on + strand at 2601.223 kb on + strand, within EX28DRAFT_2570 at 2601.346 kb on - strand, within EX28DRAFT_2570 at 2601.346 kb on - strand, within EX28DRAFT_2570 at 2601.482 kb on + strand, within EX28DRAFT_2570 at 2601.526 kb on - strand, within EX28DRAFT_2570 at 2601.585 kb on - strand, within EX28DRAFT_2570 at 2601.585 kb on - strand, within EX28DRAFT_2570 at 2601.586 kb on + strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.865 kb on + strand, within EX28DRAFT_2570 at 2601.865 kb on + strand, within EX28DRAFT_2570 at 2601.984 kb on - strand, within EX28DRAFT_2570 at 2602.222 kb on - strand, within EX28DRAFT_2570 at 2602.222 kb on - strand, within EX28DRAFT_2570 at 2602.465 kb on - strand, within EX28DRAFT_2570 at 2602.488 kb on + strand, within EX28DRAFT_2570 at 2602.489 kb on - strand, within EX28DRAFT_2570 at 2602.489 kb on - strand, within EX28DRAFT_2570 at 2602.639 kb on - strand, within EX28DRAFT_2570 at 2602.654 kb on - strand, within EX28DRAFT_2570 at 2602.690 kb on + strand, within EX28DRAFT_2570 at 2602.691 kb on - strand, within EX28DRAFT_2570 at 2602.981 kb on - strand, within EX28DRAFT_2570 at 2603.020 kb on - strand, within EX28DRAFT_2570 at 2603.131 kb on - strand, within EX28DRAFT_2570 at 2603.226 kb on - strand, within EX28DRAFT_2570 at 2603.467 kb on + strand at 2603.467 kb on + strand at 2603.519 kb on + strand at 2603.544 kb on + strand at 2603.544 kb on + strand at 2603.545 kb on - strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.602 kb on - strand at 2603.602 kb on - strand at 2603.602 kb on - strand at 2603.621 kb on + strand at 2603.622 kb on - strand at 2603.647 kb on + strand at 2603.703 kb on + strand at 2603.723 kb on + strand at 2603.831 kb on - strand, within EX28DRAFT_2571 at 2603.866 kb on + strand, within EX28DRAFT_2571 at 2603.909 kb on + strand, within EX28DRAFT_2571 at 2603.910 kb on - strand, within EX28DRAFT_2571 at 2604.031 kb on + strand, within EX28DRAFT_2571 at 2604.032 kb on - strand, within EX28DRAFT_2571 at 2604.032 kb on - strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.035 kb on - strand, within EX28DRAFT_2571 at 2604.190 kb on + strand, within EX28DRAFT_2571 at 2604.456 kb on - strand, within EX28DRAFT_2571 at 2604.456 kb on - strand, within EX28DRAFT_2571
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,600,286 - EX28DRAFT_2569 0.52 -0.1 2,600,333 + EX28DRAFT_2569 0.56 +0.4 2,600,334 - EX28DRAFT_2569 0.56 +0.1 2,600,387 + EX28DRAFT_2569 0.60 +0.2 2,600,387 + EX28DRAFT_2569 0.60 +1.2 2,600,399 + EX28DRAFT_2569 0.61 -0.4 2,600,414 - EX28DRAFT_2569 0.62 +1.2 2,600,453 + EX28DRAFT_2569 0.64 -0.8 2,600,768 + EX28DRAFT_2569 0.87 +0.1 2,600,768 + EX28DRAFT_2569 0.87 -1.0 2,600,769 - EX28DRAFT_2569 0.87 -0.1 2,600,829 - -0.2 2,600,852 - -0.2 2,601,073 + -0.9 2,601,223 + EX28DRAFT_2570 0.11 -0.0 2,601,346 - EX28DRAFT_2570 0.15 +0.3 2,601,346 - EX28DRAFT_2570 0.15 +0.3 2,601,482 + EX28DRAFT_2570 0.21 -1.2 2,601,526 - EX28DRAFT_2570 0.22 +0.4 2,601,585 - EX28DRAFT_2570 0.25 +0.0 2,601,585 - EX28DRAFT_2570 0.25 -0.2 2,601,586 + EX28DRAFT_2570 0.25 +0.5 2,601,587 - EX28DRAFT_2570 0.25 -0.1 2,601,587 - EX28DRAFT_2570 0.25 +0.1 2,601,587 - EX28DRAFT_2570 0.25 +1.9 2,601,587 - EX28DRAFT_2570 0.25 -0.6 2,601,865 + EX28DRAFT_2570 0.35 -0.9 2,601,865 + EX28DRAFT_2570 0.35 -2.0 2,601,984 - EX28DRAFT_2570 0.40 +0.1 2,602,222 - EX28DRAFT_2570 0.49 +0.2 2,602,222 - EX28DRAFT_2570 0.49 +0.2 2,602,465 - EX28DRAFT_2570 0.58 +0.4 2,602,488 + EX28DRAFT_2570 0.59 +0.4 2,602,489 - EX28DRAFT_2570 0.59 +1.1 2,602,489 - EX28DRAFT_2570 0.59 +0.0 2,602,639 - EX28DRAFT_2570 0.65 -0.1 2,602,654 - EX28DRAFT_2570 0.65 +1.5 2,602,690 + EX28DRAFT_2570 0.67 +0.2 2,602,691 - EX28DRAFT_2570 0.67 -0.2 2,602,981 - EX28DRAFT_2570 0.78 +0.4 2,603,020 - EX28DRAFT_2570 0.79 -1.2 2,603,131 - EX28DRAFT_2570 0.84 +0.4 2,603,226 - EX28DRAFT_2570 0.87 +0.0 2,603,467 + -0.4 2,603,467 + +0.0 2,603,519 + +0.2 2,603,544 + +0.7 2,603,544 + -0.5 2,603,545 - -0.8 2,603,601 + -0.0 2,603,601 + +0.1 2,603,601 + +0.1 2,603,601 + +0.4 2,603,602 - -0.6 2,603,602 - +0.2 2,603,602 - -0.3 2,603,621 + -0.0 2,603,622 - -0.2 2,603,647 + -0.2 2,603,703 + +0.2 2,603,723 + -0.4 2,603,831 - EX28DRAFT_2571 0.10 +0.6 2,603,866 + EX28DRAFT_2571 0.12 +0.6 2,603,909 + EX28DRAFT_2571 0.14 -1.1 2,603,910 - EX28DRAFT_2571 0.14 -0.1 2,604,031 + EX28DRAFT_2571 0.21 +0.5 2,604,032 - EX28DRAFT_2571 0.21 +0.1 2,604,032 - EX28DRAFT_2571 0.21 +0.3 2,604,034 + EX28DRAFT_2571 0.21 -0.3 2,604,034 + EX28DRAFT_2571 0.21 -0.1 2,604,034 + EX28DRAFT_2571 0.21 -0.4 2,604,035 - EX28DRAFT_2571 0.21 -0.0 2,604,190 + EX28DRAFT_2571 0.30 +0.5 2,604,456 - EX28DRAFT_2571 0.44 +0.4 2,604,456 - EX28DRAFT_2571 0.44 -0.1
Or see this region's nucleotide sequence