Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2300 and EX28DRAFT_2301 are separated by 249 nucleotides EX28DRAFT_2301 and EX28DRAFT_2302 are separated by 226 nucleotides EX28DRAFT_2302 and EX28DRAFT_2303 are separated by 8 nucleotides EX28DRAFT_2303 and EX28DRAFT_2304 are separated by 23 nucleotides EX28DRAFT_2304 and EX28DRAFT_2305 are separated by 32 nucleotides EX28DRAFT_2305 and EX28DRAFT_2306 are separated by 17 nucleotides EX28DRAFT_2306 and EX28DRAFT_2307 are separated by 40 nucleotides EX28DRAFT_2307 and EX28DRAFT_2308 are separated by 36 nucleotides
EX28DRAFT_2300: EX28DRAFT_2300 - Predicted sugar phosphatases of the HAD superfamily, at 2,330,050 to 2,330,802
_2300
EX28DRAFT_2301: EX28DRAFT_2301 - asparagine synthase (glutamine-hydrolyzing), at 2,331,052 to 2,332,716
_2301
EX28DRAFT_2302: EX28DRAFT_2302 - tRNA, at 2,332,943 to 2,333,019
_2302
EX28DRAFT_2303: EX28DRAFT_2303 - tRNA, at 2,333,028 to 2,333,112
_2303
EX28DRAFT_2304: EX28DRAFT_2304 - tRNA, at 2,333,136 to 2,333,210
_2304
EX28DRAFT_2305: EX28DRAFT_2305 - tRNA, at 2,333,243 to 2,333,317
_2305
EX28DRAFT_2306: EX28DRAFT_2306 - tRNA, at 2,333,335 to 2,333,411
_2306
EX28DRAFT_2307: EX28DRAFT_2307 - tRNA, at 2,333,452 to 2,333,526
_2307
EX28DRAFT_2308: EX28DRAFT_2308 - tRNA, at 2,333,563 to 2,333,637
_2308
Position (kb)
2331
2332
2333 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2330.059 kb on - strand at 2330.066 kb on + strand at 2330.066 kb on + strand at 2330.133 kb on - strand, within EX28DRAFT_2300 at 2330.179 kb on + strand, within EX28DRAFT_2300 at 2330.180 kb on - strand, within EX28DRAFT_2300 at 2330.254 kb on + strand, within EX28DRAFT_2300 at 2330.255 kb on - strand, within EX28DRAFT_2300 at 2330.255 kb on - strand, within EX28DRAFT_2300 at 2330.416 kb on - strand, within EX28DRAFT_2300 at 2330.443 kb on + strand, within EX28DRAFT_2300 at 2330.444 kb on - strand, within EX28DRAFT_2300 at 2330.837 kb on + strand at 2330.839 kb on + strand at 2331.009 kb on - strand at 2331.009 kb on - strand at 2331.023 kb on - strand at 2331.023 kb on - strand at 2331.051 kb on + strand at 2331.051 kb on + strand at 2331.051 kb on + strand at 2331.051 kb on + strand at 2331.052 kb on - strand at 2331.052 kb on - strand at 2331.077 kb on - strand at 2331.082 kb on - strand at 2331.106 kb on - strand at 2331.207 kb on + strand at 2331.208 kb on - strand at 2331.241 kb on + strand, within EX28DRAFT_2301 at 2331.242 kb on - strand, within EX28DRAFT_2301 at 2331.242 kb on - strand, within EX28DRAFT_2301 at 2331.242 kb on - strand, within EX28DRAFT_2301 at 2331.287 kb on - strand, within EX28DRAFT_2301 at 2331.287 kb on - strand, within EX28DRAFT_2301 at 2331.287 kb on - strand, within EX28DRAFT_2301 at 2331.371 kb on - strand, within EX28DRAFT_2301 at 2331.452 kb on - strand, within EX28DRAFT_2301 at 2331.490 kb on + strand, within EX28DRAFT_2301 at 2331.491 kb on - strand, within EX28DRAFT_2301 at 2331.491 kb on - strand, within EX28DRAFT_2301 at 2331.491 kb on - strand, within EX28DRAFT_2301 at 2331.491 kb on - strand, within EX28DRAFT_2301 at 2331.520 kb on + strand, within EX28DRAFT_2301 at 2331.622 kb on + strand, within EX28DRAFT_2301 at 2331.622 kb on + strand, within EX28DRAFT_2301 at 2331.623 kb on - strand, within EX28DRAFT_2301 at 2331.623 kb on - strand, within EX28DRAFT_2301 at 2331.647 kb on - strand, within EX28DRAFT_2301 at 2331.991 kb on + strand, within EX28DRAFT_2301 at 2331.991 kb on + strand, within EX28DRAFT_2301 at 2331.991 kb on + strand, within EX28DRAFT_2301 at 2331.992 kb on - strand, within EX28DRAFT_2301 at 2332.006 kb on + strand, within EX28DRAFT_2301 at 2332.006 kb on + strand, within EX28DRAFT_2301 at 2332.129 kb on + strand, within EX28DRAFT_2301 at 2332.152 kb on + strand, within EX28DRAFT_2301 at 2332.197 kb on + strand, within EX28DRAFT_2301 at 2332.197 kb on + strand, within EX28DRAFT_2301 at 2332.197 kb on + strand, within EX28DRAFT_2301 at 2332.197 kb on + strand, within EX28DRAFT_2301 at 2332.198 kb on - strand, within EX28DRAFT_2301 at 2332.198 kb on - strand, within EX28DRAFT_2301 at 2332.198 kb on - strand, within EX28DRAFT_2301 at 2332.369 kb on + strand, within EX28DRAFT_2301 at 2332.428 kb on + strand, within EX28DRAFT_2301 at 2332.537 kb on + strand, within EX28DRAFT_2301 at 2332.538 kb on - strand, within EX28DRAFT_2301 at 2332.538 kb on - strand, within EX28DRAFT_2301 at 2332.714 kb on + strand at 2332.789 kb on - strand at 2332.791 kb on + strand at 2332.798 kb on + strand at 2332.799 kb on - strand at 2333.640 kb on + strand at 2333.640 kb on + strand at 2333.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,330,059 - -0.8 2,330,066 + -0.3 2,330,066 + -0.2 2,330,133 - EX28DRAFT_2300 0.11 -0.8 2,330,179 + EX28DRAFT_2300 0.17 +0.7 2,330,180 - EX28DRAFT_2300 0.17 -0.2 2,330,254 + EX28DRAFT_2300 0.27 +0.5 2,330,255 - EX28DRAFT_2300 0.27 -0.0 2,330,255 - EX28DRAFT_2300 0.27 +0.1 2,330,416 - EX28DRAFT_2300 0.49 -0.7 2,330,443 + EX28DRAFT_2300 0.52 -0.3 2,330,444 - EX28DRAFT_2300 0.52 +0.0 2,330,837 + -0.7 2,330,839 + +1.0 2,331,009 - -0.5 2,331,009 - -0.0 2,331,023 - -0.2 2,331,023 - -0.1 2,331,051 + -0.2 2,331,051 + +2.5 2,331,051 + +0.5 2,331,051 + -0.8 2,331,052 - -0.5 2,331,052 - -0.4 2,331,077 - -0.2 2,331,082 - -0.8 2,331,106 - -0.0 2,331,207 + -0.5 2,331,208 - -0.5 2,331,241 + EX28DRAFT_2301 0.11 +0.2 2,331,242 - EX28DRAFT_2301 0.11 -0.5 2,331,242 - EX28DRAFT_2301 0.11 -0.5 2,331,242 - EX28DRAFT_2301 0.11 +0.8 2,331,287 - EX28DRAFT_2301 0.14 -0.4 2,331,287 - EX28DRAFT_2301 0.14 -0.2 2,331,287 - EX28DRAFT_2301 0.14 -0.3 2,331,371 - EX28DRAFT_2301 0.19 -1.2 2,331,452 - EX28DRAFT_2301 0.24 -1.0 2,331,490 + EX28DRAFT_2301 0.26 +0.4 2,331,491 - EX28DRAFT_2301 0.26 +0.3 2,331,491 - EX28DRAFT_2301 0.26 -0.1 2,331,491 - EX28DRAFT_2301 0.26 -1.1 2,331,491 - EX28DRAFT_2301 0.26 -0.2 2,331,520 + EX28DRAFT_2301 0.28 -1.1 2,331,622 + EX28DRAFT_2301 0.34 +0.5 2,331,622 + EX28DRAFT_2301 0.34 -2.0 2,331,623 - EX28DRAFT_2301 0.34 -0.3 2,331,623 - EX28DRAFT_2301 0.34 -0.2 2,331,647 - EX28DRAFT_2301 0.36 +0.6 2,331,991 + EX28DRAFT_2301 0.56 -0.2 2,331,991 + EX28DRAFT_2301 0.56 -0.8 2,331,991 + EX28DRAFT_2301 0.56 +0.9 2,331,992 - EX28DRAFT_2301 0.56 +0.2 2,332,006 + EX28DRAFT_2301 0.57 -0.3 2,332,006 + EX28DRAFT_2301 0.57 -0.5 2,332,129 + EX28DRAFT_2301 0.65 -0.9 2,332,152 + EX28DRAFT_2301 0.66 -0.5 2,332,197 + EX28DRAFT_2301 0.69 -0.3 2,332,197 + EX28DRAFT_2301 0.69 -0.9 2,332,197 + EX28DRAFT_2301 0.69 -1.7 2,332,197 + EX28DRAFT_2301 0.69 -0.3 2,332,198 - EX28DRAFT_2301 0.69 -0.9 2,332,198 - EX28DRAFT_2301 0.69 +0.0 2,332,198 - EX28DRAFT_2301 0.69 -0.3 2,332,369 + EX28DRAFT_2301 0.79 +1.7 2,332,428 + EX28DRAFT_2301 0.83 -0.7 2,332,537 + EX28DRAFT_2301 0.89 +0.0 2,332,538 - EX28DRAFT_2301 0.89 +0.7 2,332,538 - EX28DRAFT_2301 0.89 +0.2 2,332,714 + +0.1 2,332,789 - -0.0 2,332,791 + -0.7 2,332,798 + +0.9 2,332,799 - -0.3 2,333,640 + +0.1 2,333,640 + +0.1 2,333,689 + -0.1
Or see this region's nucleotide sequence