Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2295 and EX28DRAFT_2296 are separated by 169 nucleotides EX28DRAFT_2296 and EX28DRAFT_2297 are separated by 370 nucleotides
EX28DRAFT_2295: EX28DRAFT_2295 - glutaminyl-tRNA synthetase (EC 6.1.1.18), at 2,322,583 to 2,324,250
_2295
EX28DRAFT_2296: EX28DRAFT_2296 - PTS system, N-acetylglucosamine-specific IIBC component, at 2,324,420 to 2,326,399
_2296
EX28DRAFT_2297: EX28DRAFT_2297 - glucosamine-6-phosphate isomerase, at 2,326,770 to 2,327,570
_2297
Position (kb)
2324
2325
2326
2327 Strain fitness (log2 ratio)
-1
0
1
2 at 2324.297 kb on - strand at 2324.297 kb on - strand at 2324.431 kb on + strand at 2324.440 kb on - strand at 2324.528 kb on + strand at 2324.624 kb on - strand, within EX28DRAFT_2296 at 2325.219 kb on - strand, within EX28DRAFT_2296 at 2325.299 kb on - strand, within EX28DRAFT_2296 at 2325.318 kb on + strand, within EX28DRAFT_2296 at 2325.318 kb on + strand, within EX28DRAFT_2296 at 2325.318 kb on + strand, within EX28DRAFT_2296 at 2325.318 kb on + strand, within EX28DRAFT_2296 at 2325.319 kb on - strand, within EX28DRAFT_2296 at 2325.319 kb on - strand, within EX28DRAFT_2296 at 2325.319 kb on - strand, within EX28DRAFT_2296 at 2325.496 kb on - strand, within EX28DRAFT_2296 at 2325.624 kb on + strand, within EX28DRAFT_2296 at 2325.624 kb on + strand, within EX28DRAFT_2296 at 2325.625 kb on - strand, within EX28DRAFT_2296 at 2325.631 kb on - strand, within EX28DRAFT_2296 at 2325.924 kb on + strand, within EX28DRAFT_2296 at 2325.924 kb on + strand, within EX28DRAFT_2296 at 2325.924 kb on + strand, within EX28DRAFT_2296 at 2325.924 kb on + strand, within EX28DRAFT_2296 at 2325.924 kb on + strand, within EX28DRAFT_2296 at 2325.925 kb on - strand, within EX28DRAFT_2296 at 2325.925 kb on - strand, within EX28DRAFT_2296 at 2325.925 kb on - strand, within EX28DRAFT_2296 at 2326.038 kb on + strand, within EX28DRAFT_2296 at 2326.038 kb on + strand, within EX28DRAFT_2296 at 2326.139 kb on - strand, within EX28DRAFT_2296 at 2326.139 kb on - strand, within EX28DRAFT_2296 at 2326.294 kb on + strand at 2326.318 kb on + strand at 2326.318 kb on + strand at 2326.322 kb on - strand at 2326.493 kb on + strand at 2326.511 kb on - strand at 2326.511 kb on - strand at 2326.514 kb on + strand at 2326.628 kb on + strand at 2326.629 kb on - strand at 2326.629 kb on - strand at 2326.629 kb on - strand at 2326.705 kb on - strand at 2326.710 kb on + strand at 2326.710 kb on + strand at 2326.714 kb on + strand at 2326.715 kb on - strand at 2326.747 kb on + strand at 2326.748 kb on - strand at 2326.838 kb on + strand at 2326.937 kb on + strand, within EX28DRAFT_2297 at 2326.989 kb on + strand, within EX28DRAFT_2297 at 2326.989 kb on + strand, within EX28DRAFT_2297 at 2326.990 kb on - strand, within EX28DRAFT_2297 at 2327.022 kb on + strand, within EX28DRAFT_2297 at 2327.023 kb on - strand, within EX28DRAFT_2297 at 2327.023 kb on - strand, within EX28DRAFT_2297 at 2327.034 kb on - strand, within EX28DRAFT_2297 at 2327.131 kb on - strand, within EX28DRAFT_2297 at 2327.182 kb on + strand, within EX28DRAFT_2297 at 2327.183 kb on - strand, within EX28DRAFT_2297 at 2327.319 kb on + strand, within EX28DRAFT_2297
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,324,297 - +1.7 2,324,297 - +0.5 2,324,431 + -0.2 2,324,440 - +0.1 2,324,528 + +0.1 2,324,624 - EX28DRAFT_2296 0.10 +0.2 2,325,219 - EX28DRAFT_2296 0.40 +0.7 2,325,299 - EX28DRAFT_2296 0.44 -0.4 2,325,318 + EX28DRAFT_2296 0.45 -0.3 2,325,318 + EX28DRAFT_2296 0.45 +0.6 2,325,318 + EX28DRAFT_2296 0.45 +0.2 2,325,318 + EX28DRAFT_2296 0.45 +0.4 2,325,319 - EX28DRAFT_2296 0.45 +2.3 2,325,319 - EX28DRAFT_2296 0.45 +0.1 2,325,319 - EX28DRAFT_2296 0.45 -0.4 2,325,496 - EX28DRAFT_2296 0.54 -0.2 2,325,624 + EX28DRAFT_2296 0.61 -0.2 2,325,624 + EX28DRAFT_2296 0.61 +1.0 2,325,625 - EX28DRAFT_2296 0.61 +0.3 2,325,631 - EX28DRAFT_2296 0.61 +0.0 2,325,924 + EX28DRAFT_2296 0.76 -0.0 2,325,924 + EX28DRAFT_2296 0.76 -0.2 2,325,924 + EX28DRAFT_2296 0.76 +1.1 2,325,924 + EX28DRAFT_2296 0.76 -0.4 2,325,924 + EX28DRAFT_2296 0.76 -0.4 2,325,925 - EX28DRAFT_2296 0.76 +0.6 2,325,925 - EX28DRAFT_2296 0.76 +0.1 2,325,925 - EX28DRAFT_2296 0.76 +0.6 2,326,038 + EX28DRAFT_2296 0.82 +2.6 2,326,038 + EX28DRAFT_2296 0.82 -0.7 2,326,139 - EX28DRAFT_2296 0.87 +0.4 2,326,139 - EX28DRAFT_2296 0.87 -0.4 2,326,294 + -0.0 2,326,318 + +0.1 2,326,318 + -0.3 2,326,322 - -0.3 2,326,493 + +0.2 2,326,511 - -0.9 2,326,511 - +0.1 2,326,514 + +0.3 2,326,628 + +0.7 2,326,629 - +0.3 2,326,629 - -1.4 2,326,629 - +0.2 2,326,705 - -0.0 2,326,710 + +0.9 2,326,710 + -0.2 2,326,714 + +0.2 2,326,715 - -0.4 2,326,747 + -0.3 2,326,748 - -0.3 2,326,838 + -0.2 2,326,937 + EX28DRAFT_2297 0.21 +0.2 2,326,989 + EX28DRAFT_2297 0.27 -0.1 2,326,989 + EX28DRAFT_2297 0.27 -0.8 2,326,990 - EX28DRAFT_2297 0.27 -0.0 2,327,022 + EX28DRAFT_2297 0.31 +0.2 2,327,023 - EX28DRAFT_2297 0.32 +0.4 2,327,023 - EX28DRAFT_2297 0.32 -0.0 2,327,034 - EX28DRAFT_2297 0.33 +0.1 2,327,131 - EX28DRAFT_2297 0.45 +0.5 2,327,182 + EX28DRAFT_2297 0.51 +0.7 2,327,183 - EX28DRAFT_2297 0.52 +0.2 2,327,319 + EX28DRAFT_2297 0.69 +0.2
Or see this region's nucleotide sequence