Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1736 and EX28DRAFT_1737 are separated by 129 nucleotides EX28DRAFT_1737 and EX28DRAFT_1738 are separated by 11 nucleotides
EX28DRAFT_1736: EX28DRAFT_1736 - Catalase, at 1,750,260 to 1,752,509
_1736
EX28DRAFT_1737: EX28DRAFT_1737 - Uncharacterized protein conserved in bacteria, at 1,752,639 to 1,753,388
_1737
EX28DRAFT_1738: EX28DRAFT_1738 - Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases, at 1,753,400 to 1,754,755
_1738
Position (kb)
1752
1753
1754 Strain fitness (log2 ratio)
-1
0
1 at 1751.648 kb on + strand, within EX28DRAFT_1736 at 1751.648 kb on + strand, within EX28DRAFT_1736 at 1751.757 kb on + strand, within EX28DRAFT_1736 at 1751.760 kb on + strand, within EX28DRAFT_1736 at 1751.859 kb on + strand, within EX28DRAFT_1736 at 1752.104 kb on + strand, within EX28DRAFT_1736 at 1752.262 kb on + strand, within EX28DRAFT_1736 at 1752.262 kb on + strand, within EX28DRAFT_1736 at 1752.263 kb on - strand, within EX28DRAFT_1736 at 1752.263 kb on - strand, within EX28DRAFT_1736 at 1752.295 kb on - strand at 1752.295 kb on - strand at 1752.295 kb on - strand at 1752.297 kb on + strand at 1752.298 kb on - strand at 1752.312 kb on + strand at 1752.576 kb on - strand at 1752.689 kb on - strand at 1752.869 kb on - strand, within EX28DRAFT_1737 at 1753.001 kb on + strand, within EX28DRAFT_1737 at 1753.001 kb on + strand, within EX28DRAFT_1737 at 1753.001 kb on + strand, within EX28DRAFT_1737 at 1753.001 kb on + strand, within EX28DRAFT_1737 at 1753.002 kb on - strand, within EX28DRAFT_1737 at 1753.322 kb on + strand at 1753.323 kb on - strand at 1753.401 kb on + strand at 1753.402 kb on - strand at 1753.402 kb on - strand at 1753.746 kb on + strand, within EX28DRAFT_1738 at 1753.746 kb on + strand, within EX28DRAFT_1738 at 1753.747 kb on - strand, within EX28DRAFT_1738 at 1753.747 kb on - strand, within EX28DRAFT_1738 at 1753.771 kb on - strand, within EX28DRAFT_1738 at 1753.867 kb on - strand, within EX28DRAFT_1738 at 1753.924 kb on + strand, within EX28DRAFT_1738 at 1753.925 kb on - strand, within EX28DRAFT_1738 at 1753.926 kb on + strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.927 kb on - strand, within EX28DRAFT_1738 at 1753.972 kb on - strand, within EX28DRAFT_1738 at 1753.974 kb on + strand, within EX28DRAFT_1738 at 1753.983 kb on + strand, within EX28DRAFT_1738 at 1753.984 kb on - strand, within EX28DRAFT_1738 at 1754.141 kb on + strand, within EX28DRAFT_1738 at 1754.141 kb on + strand, within EX28DRAFT_1738 at 1754.142 kb on - strand, within EX28DRAFT_1738 at 1754.239 kb on + strand, within EX28DRAFT_1738 at 1754.239 kb on + strand, within EX28DRAFT_1738 at 1754.240 kb on - strand, within EX28DRAFT_1738
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,751,648 + EX28DRAFT_1736 0.62 +0.0 1,751,648 + EX28DRAFT_1736 0.62 -0.1 1,751,757 + EX28DRAFT_1736 0.67 -0.5 1,751,760 + EX28DRAFT_1736 0.67 -0.2 1,751,859 + EX28DRAFT_1736 0.71 -0.2 1,752,104 + EX28DRAFT_1736 0.82 -0.4 1,752,262 + EX28DRAFT_1736 0.89 -0.5 1,752,262 + EX28DRAFT_1736 0.89 +0.5 1,752,263 - EX28DRAFT_1736 0.89 +0.0 1,752,263 - EX28DRAFT_1736 0.89 +0.4 1,752,295 - +0.2 1,752,295 - -0.2 1,752,295 - -0.7 1,752,297 + -0.2 1,752,298 - -0.2 1,752,312 + -0.2 1,752,576 - +0.8 1,752,689 - +0.2 1,752,869 - EX28DRAFT_1737 0.31 -0.4 1,753,001 + EX28DRAFT_1737 0.48 -0.0 1,753,001 + EX28DRAFT_1737 0.48 +1.2 1,753,001 + EX28DRAFT_1737 0.48 -0.4 1,753,001 + EX28DRAFT_1737 0.48 -0.5 1,753,002 - EX28DRAFT_1737 0.48 +0.7 1,753,322 + -1.1 1,753,323 - -0.2 1,753,401 + -0.1 1,753,402 - -0.3 1,753,402 - +0.6 1,753,746 + EX28DRAFT_1738 0.26 -0.1 1,753,746 + EX28DRAFT_1738 0.26 -0.1 1,753,747 - EX28DRAFT_1738 0.26 +0.2 1,753,747 - EX28DRAFT_1738 0.26 +0.5 1,753,771 - EX28DRAFT_1738 0.27 -0.9 1,753,867 - EX28DRAFT_1738 0.34 +0.7 1,753,924 + EX28DRAFT_1738 0.39 +0.3 1,753,925 - EX28DRAFT_1738 0.39 -0.2 1,753,926 + EX28DRAFT_1738 0.39 -0.6 1,753,927 - EX28DRAFT_1738 0.39 +0.7 1,753,927 - EX28DRAFT_1738 0.39 +0.2 1,753,927 - EX28DRAFT_1738 0.39 +1.2 1,753,927 - EX28DRAFT_1738 0.39 -0.2 1,753,927 - EX28DRAFT_1738 0.39 -1.5 1,753,927 - EX28DRAFT_1738 0.39 +0.3 1,753,927 - EX28DRAFT_1738 0.39 +0.0 1,753,927 - EX28DRAFT_1738 0.39 +0.0 1,753,927 - EX28DRAFT_1738 0.39 +0.2 1,753,972 - EX28DRAFT_1738 0.42 +0.0 1,753,974 + EX28DRAFT_1738 0.42 +0.4 1,753,983 + EX28DRAFT_1738 0.43 +0.3 1,753,984 - EX28DRAFT_1738 0.43 -0.3 1,754,141 + EX28DRAFT_1738 0.55 -0.4 1,754,141 + EX28DRAFT_1738 0.55 +0.4 1,754,142 - EX28DRAFT_1738 0.55 -1.5 1,754,239 + EX28DRAFT_1738 0.62 -0.1 1,754,239 + EX28DRAFT_1738 0.62 +0.1 1,754,240 - EX28DRAFT_1738 0.62 -0.6
Or see this region's nucleotide sequence