Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1251 and EX28DRAFT_1252 are separated by 132 nucleotides EX28DRAFT_1252 and EX28DRAFT_1253 are separated by 64 nucleotides EX28DRAFT_1253 and EX28DRAFT_1254 are separated by 181 nucleotides
EX28DRAFT_1251: EX28DRAFT_1251 - hypothetical protein, at 1,267,856 to 1,268,365
_1251
EX28DRAFT_1252: EX28DRAFT_1252 - TIGR00156 family protein, at 1,268,498 to 1,268,887
_1252
EX28DRAFT_1253: EX28DRAFT_1253 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,268,952 to 1,269,836
_1253
EX28DRAFT_1254: EX28DRAFT_1254 - Transcriptional regulator, at 1,270,018 to 1,270,941
_1254
Position (kb) 1268
1269
1270 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1267.990 kb on - strand, within EX28DRAFT_1251 at 1268.023 kb on + strand, within EX28DRAFT_1251 at 1268.024 kb on - strand, within EX28DRAFT_1251 at 1268.024 kb on - strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.166 kb on + strand, within EX28DRAFT_1251 at 1268.167 kb on - strand, within EX28DRAFT_1251 at 1268.171 kb on + strand, within EX28DRAFT_1251 at 1268.172 kb on - strand, within EX28DRAFT_1251 at 1268.272 kb on + strand, within EX28DRAFT_1251 at 1268.442 kb on + strand at 1268.466 kb on + strand at 1268.781 kb on + strand, within EX28DRAFT_1252 at 1268.951 kb on + strand at 1268.951 kb on + strand at 1268.964 kb on - strand at 1268.973 kb on - strand at 1268.973 kb on - strand at 1269.109 kb on + strand, within EX28DRAFT_1253 at 1269.110 kb on - strand, within EX28DRAFT_1253 at 1269.156 kb on + strand, within EX28DRAFT_1253 at 1269.185 kb on + strand, within EX28DRAFT_1253 at 1269.186 kb on - strand, within EX28DRAFT_1253 at 1269.190 kb on - strand, within EX28DRAFT_1253 at 1269.498 kb on - strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.501 kb on - strand, within EX28DRAFT_1253 at 1269.501 kb on - strand, within EX28DRAFT_1253 at 1269.789 kb on - strand at 1269.835 kb on - strand at 1269.869 kb on + strand at 1270.007 kb on + strand at 1270.017 kb on + strand at 1270.049 kb on + strand at 1270.218 kb on + strand, within EX28DRAFT_1254 at 1270.218 kb on + strand, within EX28DRAFT_1254 at 1270.218 kb on + strand, within EX28DRAFT_1254 at 1270.219 kb on - strand, within EX28DRAFT_1254 at 1270.219 kb on - strand, within EX28DRAFT_1254 at 1270.432 kb on - strand, within EX28DRAFT_1254 at 1270.523 kb on - strand, within EX28DRAFT_1254 at 1270.690 kb on - strand, within EX28DRAFT_1254 at 1270.690 kb on - strand, within EX28DRAFT_1254 at 1270.743 kb on + strand, within EX28DRAFT_1254 at 1270.743 kb on + strand, within EX28DRAFT_1254 at 1270.759 kb on + strand, within EX28DRAFT_1254 at 1270.760 kb on - strand, within EX28DRAFT_1254 at 1270.760 kb on - strand, within EX28DRAFT_1254 at 1270.760 kb on - strand, within EX28DRAFT_1254 at 1270.799 kb on + strand, within EX28DRAFT_1254 at 1270.799 kb on + strand, within EX28DRAFT_1254 at 1270.830 kb on + strand, within EX28DRAFT_1254
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,267,990 - EX28DRAFT_1251 0.26 +1.2 1,268,023 + EX28DRAFT_1251 0.33 -0.2 1,268,024 - EX28DRAFT_1251 0.33 +0.1 1,268,024 - EX28DRAFT_1251 0.33 -0.7 1,268,094 + EX28DRAFT_1251 0.47 -0.3 1,268,094 + EX28DRAFT_1251 0.47 -0.5 1,268,094 + EX28DRAFT_1251 0.47 -0.1 1,268,094 + EX28DRAFT_1251 0.47 +1.1 1,268,095 - EX28DRAFT_1251 0.47 -0.3 1,268,095 - EX28DRAFT_1251 0.47 +0.3 1,268,095 - EX28DRAFT_1251 0.47 -3.4 1,268,095 - EX28DRAFT_1251 0.47 +0.1 1,268,166 + EX28DRAFT_1251 0.61 -0.2 1,268,167 - EX28DRAFT_1251 0.61 +0.2 1,268,171 + EX28DRAFT_1251 0.62 +0.1 1,268,172 - EX28DRAFT_1251 0.62 +0.4 1,268,272 + EX28DRAFT_1251 0.82 -0.4 1,268,442 + -0.2 1,268,466 + -0.4 1,268,781 + EX28DRAFT_1252 0.73 -0.1 1,268,951 + +0.3 1,268,951 + -0.4 1,268,964 - -0.3 1,268,973 - +0.1 1,268,973 - -0.6 1,269,109 + EX28DRAFT_1253 0.18 +0.2 1,269,110 - EX28DRAFT_1253 0.18 +1.2 1,269,156 + EX28DRAFT_1253 0.23 -0.1 1,269,185 + EX28DRAFT_1253 0.26 +0.6 1,269,186 - EX28DRAFT_1253 0.26 -0.6 1,269,190 - EX28DRAFT_1253 0.27 -0.6 1,269,498 - EX28DRAFT_1253 0.62 -0.2 1,269,500 + EX28DRAFT_1253 0.62 +0.5 1,269,500 + EX28DRAFT_1253 0.62 +0.1 1,269,500 + EX28DRAFT_1253 0.62 +0.8 1,269,501 - EX28DRAFT_1253 0.62 +0.7 1,269,501 - EX28DRAFT_1253 0.62 -0.6 1,269,789 - -0.0 1,269,835 - -0.2 1,269,869 + -0.2 1,270,007 + -0.1 1,270,017 + +0.1 1,270,049 + +0.5 1,270,218 + EX28DRAFT_1254 0.22 +0.3 1,270,218 + EX28DRAFT_1254 0.22 -0.1 1,270,218 + EX28DRAFT_1254 0.22 +0.3 1,270,219 - EX28DRAFT_1254 0.22 -0.3 1,270,219 - EX28DRAFT_1254 0.22 +0.2 1,270,432 - EX28DRAFT_1254 0.45 +0.1 1,270,523 - EX28DRAFT_1254 0.55 +0.9 1,270,690 - EX28DRAFT_1254 0.73 +0.1 1,270,690 - EX28DRAFT_1254 0.73 -0.5 1,270,743 + EX28DRAFT_1254 0.78 +0.1 1,270,743 + EX28DRAFT_1254 0.78 -0.2 1,270,759 + EX28DRAFT_1254 0.80 -0.0 1,270,760 - EX28DRAFT_1254 0.80 +0.2 1,270,760 - EX28DRAFT_1254 0.80 -0.8 1,270,760 - EX28DRAFT_1254 0.80 +0.3 1,270,799 + EX28DRAFT_1254 0.85 -0.2 1,270,799 + EX28DRAFT_1254 0.85 -0.4 1,270,830 + EX28DRAFT_1254 0.88 -0.9
Or see this region's nucleotide sequence