Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0746

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0745 and EX28DRAFT_0746 are separated by 184 nucleotidesEX28DRAFT_0746 and EX28DRAFT_0747 are separated by 6 nucleotides EX28DRAFT_0745: EX28DRAFT_0745 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 743,304 to 744,668 _0745 EX28DRAFT_0746: EX28DRAFT_0746 - NUDIX domain, at 744,853 to 745,431 _0746 EX28DRAFT_0747: EX28DRAFT_0747 - aminodeoxychorismate synthase, component I, bacterial clade, at 745,438 to 746,772 _0747 Position (kb) 744 745 746Strain fitness (log2 ratio) -1 0 1 2at 743.934 kb on - strand, within EX28DRAFT_0745at 744.130 kb on + strand, within EX28DRAFT_0745at 744.238 kb on + strand, within EX28DRAFT_0745at 744.239 kb on - strand, within EX28DRAFT_0745at 744.242 kb on - strand, within EX28DRAFT_0745at 744.254 kb on - strand, within EX28DRAFT_0745at 744.274 kb on + strand, within EX28DRAFT_0745at 744.275 kb on - strand, within EX28DRAFT_0745at 744.432 kb on - strand, within EX28DRAFT_0745at 744.435 kb on + strand, within EX28DRAFT_0745at 744.450 kb on - strand, within EX28DRAFT_0745at 744.467 kb on + strand, within EX28DRAFT_0745at 744.471 kb on - strand, within EX28DRAFT_0745at 744.659 kb on + strandat 744.659 kb on + strandat 744.659 kb on + strandat 744.659 kb on + strandat 744.660 kb on - strandat 744.660 kb on - strandat 744.660 kb on - strandat 744.660 kb on - strandat 744.660 kb on - strandat 744.663 kb on - strandat 744.712 kb on + strandat 744.712 kb on + strandat 744.713 kb on - strandat 744.714 kb on + strandat 744.714 kb on + strandat 744.715 kb on - strandat 744.724 kb on + strandat 744.725 kb on - strandat 744.729 kb on + strandat 744.729 kb on + strandat 744.730 kb on - strandat 744.843 kb on + strandat 744.848 kb on + strandat 744.849 kb on - strandat 744.849 kb on - strandat 744.920 kb on + strand, within EX28DRAFT_0746at 744.921 kb on - strand, within EX28DRAFT_0746at 745.058 kb on + strand, within EX28DRAFT_0746at 745.077 kb on + strand, within EX28DRAFT_0746at 745.264 kb on - strand, within EX28DRAFT_0746at 745.268 kb on - strand, within EX28DRAFT_0746at 745.268 kb on - strand, within EX28DRAFT_0746at 745.378 kb on + strandat 745.378 kb on + strandat 745.470 kb on + strandat 745.488 kb on - strandat 745.611 kb on - strand, within EX28DRAFT_0747at 746.033 kb on - strand, within EX28DRAFT_0747at 746.041 kb on + strand, within EX28DRAFT_0747at 746.041 kb on + strand, within EX28DRAFT_0747at 746.043 kb on + strand, within EX28DRAFT_0747at 746.043 kb on + strand, within EX28DRAFT_0747at 746.085 kb on + strand, within EX28DRAFT_0747at 746.085 kb on + strand, within EX28DRAFT_0747at 746.132 kb on + strand, within EX28DRAFT_0747at 746.189 kb on + strand, within EX28DRAFT_0747at 746.190 kb on - strand, within EX28DRAFT_0747at 746.219 kb on + strand, within EX28DRAFT_0747at 746.220 kb on - strand, within EX28DRAFT_0747at 746.220 kb on - strand, within EX28DRAFT_0747at 746.382 kb on - strand, within EX28DRAFT_0747at 746.382 kb on - strand, within EX28DRAFT_0747at 746.382 kb on - strand, within EX28DRAFT_0747at 746.412 kb on + strand, within EX28DRAFT_0747at 746.412 kb on + strand, within EX28DRAFT_0747

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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743,934 - EX28DRAFT_0745 0.46 -0.5
744,130 + EX28DRAFT_0745 0.61 +0.7
744,238 + EX28DRAFT_0745 0.68 +0.1
744,239 - EX28DRAFT_0745 0.68 -0.4
744,242 - EX28DRAFT_0745 0.69 +0.2
744,254 - EX28DRAFT_0745 0.70 -0.5
744,274 + EX28DRAFT_0745 0.71 -0.6
744,275 - EX28DRAFT_0745 0.71 -0.4
744,432 - EX28DRAFT_0745 0.83 +0.3
744,435 + EX28DRAFT_0745 0.83 -0.1
744,450 - EX28DRAFT_0745 0.84 -0.5
744,467 + EX28DRAFT_0745 0.85 -0.4
744,471 - EX28DRAFT_0745 0.85 +0.3
744,659 + +0.3
744,659 + +0.0
744,659 + +0.7
744,659 + -0.3
744,660 - -0.2
744,660 - -0.5
744,660 - -0.8
744,660 - -0.1
744,660 - -0.2
744,663 - -0.5
744,712 + -0.0
744,712 + -0.8
744,713 - -0.2
744,714 + -0.2
744,714 + +0.7
744,715 - -0.2
744,724 + -1.5
744,725 - -0.7
744,729 + -0.6
744,729 + +0.0
744,730 - +0.2
744,843 + +0.5
744,848 + -0.2
744,849 - +0.5
744,849 - +0.0
744,920 + EX28DRAFT_0746 0.12 +0.2
744,921 - EX28DRAFT_0746 0.12 -0.1
745,058 + EX28DRAFT_0746 0.35 -0.2
745,077 + EX28DRAFT_0746 0.39 -0.0
745,264 - EX28DRAFT_0746 0.71 -0.7
745,268 - EX28DRAFT_0746 0.72 +1.7
745,268 - EX28DRAFT_0746 0.72 -0.4
745,378 + +1.0
745,378 + -0.4
745,470 + -1.4
745,488 - +0.3
745,611 - EX28DRAFT_0747 0.13 +1.0
746,033 - EX28DRAFT_0747 0.45 -0.6
746,041 + EX28DRAFT_0747 0.45 -0.0
746,041 + EX28DRAFT_0747 0.45 -0.0
746,043 + EX28DRAFT_0747 0.45 +0.9
746,043 + EX28DRAFT_0747 0.45 -0.7
746,085 + EX28DRAFT_0747 0.48 -0.4
746,085 + EX28DRAFT_0747 0.48 +0.3
746,132 + EX28DRAFT_0747 0.52 +2.0
746,189 + EX28DRAFT_0747 0.56 -0.1
746,190 - EX28DRAFT_0747 0.56 -0.1
746,219 + EX28DRAFT_0747 0.59 -0.1
746,220 - EX28DRAFT_0747 0.59 +0.5
746,220 - EX28DRAFT_0747 0.59 -0.3
746,382 - EX28DRAFT_0747 0.71 -0.4
746,382 - EX28DRAFT_0747 0.71 +0.1
746,382 - EX28DRAFT_0747 0.71 +0.1
746,412 + EX28DRAFT_0747 0.73 +0.6
746,412 + EX28DRAFT_0747 0.73 -0.3

Or see this region's nucleotide sequence