Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03945

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,144,466	+		CCNA_01047	0.82	+0.5
1,144,466	+		CCNA_01047	0.82	+0.8
1,144,466	+		CCNA_01047	0.82	-0.4
1,144,466	+		CCNA_01047	0.82	+0.2
1,144,466	+		CCNA_01047	0.82	-0.2
1,144,474	-		CCNA_01047	0.82	-1.2
1,144,474	-		CCNA_01047	0.82	-1.4
1,144,512	+		CCNA_01047	0.84	+1.0
1,144,535	+		CCNA_01047	0.85	+0.3
1,144,536	+		CCNA_01047	0.85	-0.4
1,144,544	-		CCNA_01047	0.85	-3.1
1,144,545	+		CCNA_01047	0.85	+0.5
1,144,553	-		CCNA_01047	0.85	+0.8
1,144,561	+		CCNA_01047	0.86	-0.9
1,144,593	+		CCNA_01047	0.87	-1.8
1,144,598	+		CCNA_01047	0.87	-0.6
1,144,598	+		CCNA_01047	0.87	-0.7
1,144,606	-		CCNA_01047	0.87	-1.0
1,144,616	-		CCNA_01047	0.88	-0.9
1,144,619	+		CCNA_01047	0.88	-0.7
1,144,627	+		CCNA_01047	0.88	-0.2
1,144,627	-		CCNA_01047	0.88	+0.1
1,144,627	-		CCNA_01047	0.88	-0.1
1,144,686	-				-0.9
1,144,699	+				-0.9
1,144,707	-				-0.4
1,144,710	+				-1.3
1,144,718	-				+0.3
1,144,721	+				-0.5
1,144,721	+				+0.1
1,144,729	-				-0.0
1,144,729	-				-0.6
1,144,733	+				+0.0
1,144,734	-				-2.7
1,144,739	+				-0.3
1,144,778	-				+0.5
1,144,804	+				+0.4
1,144,817	+				-0.5
1,144,841	+				-0.2
1,144,854	-				-0.2
1,144,864	+				-0.3
1,144,934	+				-1.6
1,144,980	-				-0.8
1,145,041	+				+0.3
1,145,078	+				-1.0
1,145,081	-				+0.3
1,145,086	-				-0.8
1,145,157	+		CCNA_01048	0.19	-0.8
1,145,160	-		CCNA_01048	0.20	-1.3
1,145,178	-		CCNA_01048	0.27	+0.7
1,145,178	-		CCNA_01048	0.27	-0.2
1,145,178	-		CCNA_01048	0.27	+0.6
1,145,234	+		CCNA_01048	0.48	-0.0
1,145,235	+		CCNA_01048	0.49	-0.9
1,145,235	+		CCNA_01048	0.49	+0.7
1,145,240	+		CCNA_01048	0.51	-1.9
1,145,273	+		CCNA_01048	0.63	-1.7
1,145,273	+		CCNA_01048	0.63	+0.5
1,145,273	+		CCNA_01048	0.63	-1.1
1,145,273	+		CCNA_01048	0.63	-0.3
1,145,273	+		CCNA_01048	0.63	-1.4
1,145,273	+		CCNA_01048	0.63	-0.4
1,145,273	+		CCNA_01048	0.63	+1.6
1,145,273	+		CCNA_01048	0.63	-0.8
1,145,281	-		CCNA_01048	0.66	+0.4
1,145,281	-		CCNA_01048	0.66	-0.1
1,145,281	-		CCNA_01048	0.66	+0.3
1,145,281	-		CCNA_01048	0.66	-0.1
1,145,281	-		CCNA_01048	0.66	-0.1
1,145,281	-		CCNA_01048	0.66	+0.4
1,145,281	-		CCNA_01048	0.66	+0.3
1,145,281	-		CCNA_01048	0.66	+0.6
1,145,281	-		CCNA_01048	0.66	+0.8
1,145,281	-		CCNA_01048	0.66	+0.3
1,145,281	-		CCNA_01048	0.66	+0.7
1,145,305	+		CCNA_01048	0.75	-0.4
1,145,332	+		CCNA_01048	0.86	-1.0
1,145,332	+		CCNA_01048	0.86	-0.7
1,145,332	+		CCNA_01048	0.86	-1.4
1,145,332	+		CCNA_01048	0.86	-0.7
1,145,340	-		CCNA_01048	0.89	-0.1
1,145,340	-		CCNA_01048	0.89	+0.1
1,145,340	-		CCNA_01048	0.89	+0.6
1,145,340	-		CCNA_01048	0.89	-0.5
1,145,340	-		CCNA_01048	0.89	-0.7
1,145,340	-		CCNA_01048	0.89	+0.1
1,145,387	+				+0.1
1,145,414	-				-1.4
1,145,419	-				-0.2
1,145,426	+				+0.6
1,145,438	+				-1.2
1,145,450	+				+0.5
1,145,473	-		CCNA_03945	0.12	-0.2
1,145,483	+		CCNA_03945	0.19	-1.1
1,145,488	+		CCNA_03945	0.22	-0.5
1,145,490	-		CCNA_03945	0.24	+0.4
1,145,498	+		CCNA_03945	0.29	-1.1
1,145,516	-		CCNA_03945	0.41	-1.1
1,145,581	+		CCNA_03945	0.83	-0.9
1,145,607	-				-0.2
1,145,669	-				+2.4
1,145,674	+				-0.5
1,145,674	+				+0.1
1,145,705	-				+0.2
1,145,715	-				-0.4
1,145,722	-		CCNA_01049	0.10	+0.4
1,145,722	-		CCNA_01049	0.10	+0.8
1,145,722	-		CCNA_01049	0.10	+0.5
1,145,772	-		CCNA_01049	0.21	+1.1
1,145,775	+		CCNA_01049	0.21	+0.7
1,145,789	+		CCNA_01049	0.24	+0.5
1,145,797	-		CCNA_01049	0.26	+0.0
1,145,797	-		CCNA_01049	0.26	-1.2
1,145,823	+		CCNA_01049	0.31	+0.6
1,145,842	-		CCNA_01049	0.35	-0.2
1,145,876	+		CCNA_01049	0.42	-1.5
1,145,879	-		CCNA_01049	0.43	+0.3
1,145,879	-		CCNA_01049	0.43	-0.5
1,145,891	+		CCNA_01049	0.45	+1.4
1,145,899	-		CCNA_01049	0.47	-0.2
1,145,939	+		CCNA_01049	0.55	-0.1
1,145,939	+		CCNA_01049	0.55	-0.8
1,145,939	+		CCNA_01049	0.55	+0.8
1,145,941	+		CCNA_01049	0.56	-1.0
1,145,944	+		CCNA_01049	0.56	+2.0
1,145,947	-		CCNA_01049	0.57	-0.5
1,145,947	-		CCNA_01049	0.57	-0.3
1,145,951	-		CCNA_01049	0.58	-0.7
1,145,951	-		CCNA_01049	0.58	+3.1
1,145,959	-		CCNA_01049	0.59	+0.4
1,146,008	+		CCNA_01049	0.70	+0.1
1,146,011	-		CCNA_01049	0.70	-1.3
1,146,076	-		CCNA_01049	0.84	-1.1
1,146,086	-		CCNA_01049	0.86	-0.4
1,146,096	-		CCNA_01049	0.88	-0.0
1,146,097	+		CCNA_01049	0.88	-0.9
1,146,097	-		CCNA_01049	0.88	-1.1
1,146,142	-				-0.9
1,146,185	+				-0.3
1,146,229	+				-0.0
1,146,237	-				+0.3
1,146,397	+				-0.5
1,146,401	+				-0.5
1,146,409	-				+0.8
1,146,411	+				-0.3
1,146,436	-				-0.1
1,146,436	-				-1.1
1,146,535	+		CCNA_01050	0.15	-0.3
1,146,545	+		CCNA_01050	0.16	+0.4
1,146,584	+		CCNA_01050	0.18	+0.0
1,146,604	+		CCNA_01050	0.20	-0.8
1,146,605	+		CCNA_01050	0.20	+0.1
1,146,605	+		CCNA_01050	0.20	+0.0