Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03748

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,917,191	-				-0.1
3,917,227	+		CCNA_03747	0.13	-0.6
3,917,235	-		CCNA_03747	0.14	-0.1
3,917,242	+		CCNA_03747	0.15	-1.0
3,917,242	+		CCNA_03747	0.15	+0.6
3,917,242	+		CCNA_03747	0.15	-0.2
3,917,250	-		CCNA_03747	0.15	+0.1
3,917,389	-		CCNA_03747	0.29	-0.0
3,917,389	-		CCNA_03747	0.29	-0.3
3,917,394	+		CCNA_03747	0.29	+0.3
3,917,404	+		CCNA_03747	0.30	+1.6
3,917,410	-		CCNA_03747	0.31	-0.3
3,917,438	-		CCNA_03747	0.34	+0.5
3,917,440	+		CCNA_03747	0.34	+0.6
3,917,459	+		CCNA_03747	0.36	+1.3
3,917,459	+		CCNA_03747	0.36	-1.0
3,917,459	+		CCNA_03747	0.36	-2.6
3,917,465	+		CCNA_03747	0.36	-2.2
3,917,467	-		CCNA_03747	0.37	+1.0
3,917,467	-		CCNA_03747	0.37	+0.2
3,917,471	+		CCNA_03747	0.37	+1.9
3,917,479	-		CCNA_03747	0.38	+0.1
3,917,500	-		CCNA_03747	0.40	+0.3
3,917,500	-		CCNA_03747	0.40	+0.6
3,917,506	-		CCNA_03747	0.40	-0.2
3,917,507	+		CCNA_03747	0.40	+1.4
3,917,539	+		CCNA_03747	0.44	+1.2
3,917,550	+		CCNA_03747	0.45	-0.6
3,917,558	-		CCNA_03747	0.45	-0.8
3,917,580	-		CCNA_03747	0.48	-0.8
3,917,585	-		CCNA_03747	0.48	+1.1
3,917,637	-		CCNA_03747	0.53	-0.0
3,917,694	-		CCNA_03747	0.59	-0.4
3,917,715	-		CCNA_03747	0.61	+0.4
3,917,724	+		CCNA_03747	0.62	-0.7
3,917,736	+		CCNA_03747	0.63	+0.1
3,917,742	-		CCNA_03747	0.63	-0.4
3,917,744	-		CCNA_03747	0.64	-0.4
3,917,752	+		CCNA_03747	0.64	-0.4
3,917,760	-		CCNA_03747	0.65	+0.6
3,917,760	-		CCNA_03747	0.65	+0.1
3,917,783	+		CCNA_03747	0.67	-0.7
3,917,835	+		CCNA_03747	0.72	+0.6
3,917,835	+		CCNA_03747	0.72	+0.5
3,917,843	-		CCNA_03747	0.73	-0.1
3,917,843	-		CCNA_03747	0.73	-0.6
3,917,890	+		CCNA_03747	0.78	-1.0
3,917,898	-		CCNA_03747	0.79	-1.4
3,917,900	+		CCNA_03747	0.79	+0.0
3,917,971	-		CCNA_03747	0.86	-0.7
3,918,040	-				-0.6
3,918,097	-				-0.7
3,918,099	-				+0.5
3,918,113	-				-2.2
3,918,114	+				-0.6
3,918,135	-				-0.8
3,918,137	+				+0.2
3,918,179	+				+0.4
3,918,184	-				+0.9
3,918,185	-				-2.4
3,918,261	-		CCNA_03748	0.19	-1.1
3,918,289	-		CCNA_03748	0.24	-0.3
3,918,317	+		CCNA_03748	0.29	-0.9
3,918,322	+		CCNA_03748	0.30	-0.9
3,918,358	+		CCNA_03748	0.37	-1.1
3,918,363	+		CCNA_03748	0.37	-0.1
3,918,378	-		CCNA_03748	0.40	+0.8
3,918,388	-		CCNA_03748	0.42	+0.0
3,918,447	+		CCNA_03748	0.53	-0.2
3,918,452	+		CCNA_03748	0.53	+0.6
3,918,492	+		CCNA_03748	0.61	+0.9
3,918,518	-		CCNA_03748	0.65	-0.8
3,918,528	-		CCNA_03748	0.67	-2.0
3,918,554	-		CCNA_03748	0.72	-1.5
3,918,571	+		CCNA_03748	0.75	+1.0
3,918,592	+		CCNA_03748	0.78	+1.6
3,918,623	+		CCNA_03748	0.84	-0.3
3,918,687	+				+0.6
3,918,687	+				-0.1
3,918,716	-				-0.4
3,918,723	+				+0.1
3,918,728	+				-0.0
3,918,761	+				+0.9
3,918,769	-				+0.3
3,918,769	-				+0.0
3,918,769	-				-0.4
3,918,779	-				+1.6
3,918,779	-				-0.0
3,918,807	+				-0.9
3,918,807	+				-0.0
3,918,812	+				+0.1
3,918,812	+				+0.1
3,918,815	-				-0.6
3,918,817	+				-0.8
3,918,820	-				+0.2
3,918,825	+				+0.3
3,918,825	+				+0.1
3,918,833	-				-1.3
3,918,853	+				-1.0
3,918,861	-				+0.1
3,918,861	-				+1.3
3,918,863	+				+0.4
3,918,863	+				+0.3
3,918,873	+				-2.0
3,918,881	-				+0.0
3,918,881	-				-1.1
3,918,881	-				+0.3
3,918,894	+				-0.5
3,918,902	-				-0.1
3,918,921	+				+0.0
3,918,939	+		CCNA_03749	0.12	+0.5
3,918,947	-		CCNA_03749	0.13	-0.1
3,918,947	-		CCNA_03749	0.13	+0.1
3,918,966	+		CCNA_03749	0.15	-0.1
3,919,000	+		CCNA_03749	0.18	-0.3
3,919,038	+		CCNA_03749	0.23	-0.4
3,919,038	+		CCNA_03749	0.23	+1.2
3,919,075	+		CCNA_03749	0.27	-0.4
3,919,080	+		CCNA_03749	0.27	+0.4
3,919,083	-		CCNA_03749	0.28	+0.1
3,919,165	+		CCNA_03749	0.37	+1.4
3,919,175	+		CCNA_03749	0.38	-0.1
3,919,182	+		CCNA_03749	0.39	+0.1
3,919,182	+		CCNA_03749	0.39	-0.4
3,919,191	+		CCNA_03749	0.40	-0.1
3,919,214	+		CCNA_03749	0.42	-0.5
3,919,214	+		CCNA_03749	0.42	-0.9
3,919,224	-		CCNA_03749	0.43	-1.2
3,919,230	+		CCNA_03749	0.44	-0.1
3,919,230	+		CCNA_03749	0.44	-0.3
3,919,230	+		CCNA_03749	0.44	+1.9
3,919,238	-		CCNA_03749	0.45	-0.6
3,919,238	-		CCNA_03749	0.45	-0.4
3,919,238	-		CCNA_03749	0.45	+1.9
3,919,246	-		CCNA_03749	0.46	-0.1
3,919,265	+		CCNA_03749	0.48	+1.2
3,919,267	+		CCNA_03749	0.48	-0.1
3,919,272	+		CCNA_03749	0.49	-0.4
3,919,277	+		CCNA_03749	0.49	-0.1
3,919,285	-		CCNA_03749	0.50	+0.1
3,919,285	-		CCNA_03749	0.50	+0.5
3,919,285	-		CCNA_03749	0.50	-0.6
3,919,285	-		CCNA_03749	0.50	-0.6
3,919,316	+		CCNA_03749	0.53	-1.0
3,919,316	+		CCNA_03749	0.53	-0.2
3,919,329	-		CCNA_03749	0.55	-0.1
3,919,366	+		CCNA_03749	0.59	-0.4
3,919,374	-		CCNA_03749	0.60	-0.3
3,919,374	-		CCNA_03749	0.60	-0.5
3,919,374	-		CCNA_03749	0.60	-0.1
3,919,374	-		CCNA_03749	0.60	+0.2
3,919,376	-		CCNA_03749	0.60	+0.0
3,919,423	+		CCNA_03749	0.65	+0.9
3,919,423	+		CCNA_03749	0.65	+1.8
3,919,423	+		CCNA_03749	0.65	-0.0
3,919,433	-		CCNA_03749	0.66	+0.8
3,919,440	+		CCNA_03749	0.67	-0.3
3,919,450	+		CCNA_03749	0.68	-0.3
3,919,450	+		CCNA_03749	0.68	-0.1
3,919,450	+		CCNA_03749	0.68	+0.3
3,919,458	-		CCNA_03749	0.69	+0.1
3,919,458	-		CCNA_03749	0.69	+1.2
3,919,486	+		CCNA_03749	0.72	-0.0
3,919,488	-		CCNA_03749	0.73	+0.1
3,919,494	-		CCNA_03749	0.73	-1.9
3,919,531	+		CCNA_03749	0.77	-1.3
3,919,531	+		CCNA_03749	0.77	+0.2
3,919,539	-		CCNA_03749	0.78	-0.3
3,919,539	-		CCNA_03749	0.78	-0.8
3,919,567	+		CCNA_03749	0.81	+0.0
3,919,589	-		CCNA_03749	0.84	+0.8
3,919,644	+		CCNA_03749	0.90	-0.5
3,919,652	-				-0.0
3,919,661	+				-0.5
3,919,671	+				+0.6
3,919,679	-				-1.1
3,919,693	+				+0.2
3,919,694	-				+0.2