Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03713

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,877,370	+		CCNA_03711	0.60	-0.1
3,877,370	+		CCNA_03711	0.60	-1.5
3,877,370	+		CCNA_03711	0.60	+0.1
3,877,370	+		CCNA_03711	0.60	-0.1
3,877,378	-		CCNA_03711	0.62	+0.1
3,877,385	+		CCNA_03711	0.63	-2.4
3,877,410	+		CCNA_03711	0.67	-0.6
3,877,417	-		CCNA_03711	0.68	-0.3
3,877,417	-		CCNA_03711	0.68	+0.4
3,877,418	-		CCNA_03711	0.68	+0.2
3,877,525	+		CCNA_03711	0.85	+0.3
3,877,525	+		CCNA_03711	0.85	-0.5
3,877,532	+		CCNA_03711	0.86	+1.5
3,877,603	+				-0.3
3,877,654	-				+2.1
3,877,679	+				+0.5
3,877,679	+				+1.3
3,877,679	+				-0.0
3,877,679	+				-1.2
3,877,687	-				-0.4
3,877,687	-				-0.1
3,877,687	-				-0.1
3,877,689	+				-0.9
3,877,689	+				-0.8
3,877,697	-				-0.4
3,877,697	-				-0.3
3,877,739	+				-0.7
3,877,739	+				-1.0
3,877,765	+		CCNA_03712	0.14	-1.0
3,877,792	+		CCNA_03712	0.18	+0.2
3,877,805	-		CCNA_03712	0.20	-0.1
3,877,808	+		CCNA_03712	0.21	-0.4
3,877,808	+		CCNA_03712	0.21	+0.3
3,877,808	+		CCNA_03712	0.21	+0.7
3,877,808	+		CCNA_03712	0.21	-0.4
3,877,816	-		CCNA_03712	0.22	+0.1
3,877,859	-		CCNA_03712	0.29	+0.3
3,877,899	+		CCNA_03712	0.35	-0.6
3,877,901	+		CCNA_03712	0.36	-0.5
3,877,901	+		CCNA_03712	0.36	-0.9
3,877,901	+		CCNA_03712	0.36	-0.6
3,877,901	+		CCNA_03712	0.36	-1.1
3,877,908	-		CCNA_03712	0.37	-0.9
3,877,909	-		CCNA_03712	0.37	+0.8
3,877,909	-		CCNA_03712	0.37	+0.1
3,877,910	+		CCNA_03712	0.37	+0.0
3,877,929	-		CCNA_03712	0.40	+0.6
3,877,935	-		CCNA_03712	0.41	+0.7
3,877,940	-		CCNA_03712	0.42	-0.2
3,877,950	-		CCNA_03712	0.44	+0.3
3,877,971	+		CCNA_03712	0.47	-0.2
3,877,971	+		CCNA_03712	0.47	-0.8
3,877,974	-		CCNA_03712	0.48	-0.2
3,877,979	-		CCNA_03712	0.48	+0.0
3,877,979	-		CCNA_03712	0.48	+0.2
3,877,979	-		CCNA_03712	0.48	+0.2
3,877,979	-		CCNA_03712	0.48	-0.4
3,877,979	-		CCNA_03712	0.48	-0.2
3,877,981	+		CCNA_03712	0.49	+0.1
3,877,981	+		CCNA_03712	0.49	+0.1
3,877,981	+		CCNA_03712	0.49	-1.6
3,877,989	-		CCNA_03712	0.50	+0.7
3,877,999	-		CCNA_03712	0.52	-0.1
3,878,061	+		CCNA_03712	0.62	+0.0
3,878,061	+		CCNA_03712	0.62	-0.3
3,878,061	+		CCNA_03712	0.62	+0.0
3,878,061	+		CCNA_03712	0.62	-0.1
3,878,069	-		CCNA_03712	0.63	+0.2
3,878,069	-		CCNA_03712	0.63	-0.1
3,878,115	+		CCNA_03712	0.71	-1.0
3,878,124	-		CCNA_03712	0.72	-0.8
3,878,126	+		CCNA_03712	0.72	+0.1
3,878,153	+		CCNA_03712	0.77	-0.6
3,878,153	+		CCNA_03712	0.77	-0.5
3,878,161	-		CCNA_03712	0.78	-0.8
3,878,161	-		CCNA_03712	0.78	+0.0
3,878,235	-				+0.1
3,878,240	-				-0.0
3,878,240	-				-0.4
3,878,257	+				+0.8
3,878,258	-				-0.3
3,878,298	-				-0.6
3,878,298	-				+1.3
3,878,299	+				-0.1
3,878,317	-				-0.2
3,878,363	-				+0.5
3,878,373	-				-0.9
3,878,788	-		CCNA_03713	0.30	-0.7
3,878,789	-		CCNA_03713	0.30	+0.3
3,878,922	+		CCNA_03713	0.39	-1.4
3,878,930	+		CCNA_03713	0.39	-0.6
3,878,971	+		CCNA_03713	0.42	+0.6
3,879,016	-		CCNA_03713	0.45	+0.8
3,879,035	-		CCNA_03713	0.46	-0.2
3,879,170	+		CCNA_03713	0.55	+0.8
3,879,177	+		CCNA_03713	0.56	+0.6
3,879,177	+		CCNA_03713	0.56	-0.8
3,879,178	-		CCNA_03713	0.56	+0.2
3,879,242	+		CCNA_03713	0.60	+0.3
3,879,268	-		CCNA_03713	0.62	+0.6
3,879,284	+		CCNA_03713	0.63	-0.6
3,879,347	+		CCNA_03713	0.67	-1.8
3,879,403	-		CCNA_03713	0.71	+0.9
3,879,413	-		CCNA_03713	0.71	-0.5
3,879,424	+		CCNA_03713	0.72	-1.6
3,879,553	+		CCNA_03713	0.81	-1.6
3,879,648	+		CCNA_03713	0.87	+1.4
3,879,656	-		CCNA_03713	0.88	+1.6
3,879,656	-		CCNA_03713	0.88	+0.4
3,879,741	+				-2.2
3,879,797	+				-0.1
3,879,805	-				-0.4
3,879,805	-				+0.1
3,879,805	-				+0.1
3,879,807	+				-0.8
3,879,845	+				-0.9
3,879,853	-				-0.4
3,879,853	-				-0.2
3,879,873	+				+0.6
3,879,891	+				-1.6
3,879,894	-				+0.2
3,879,928	+				-1.8
3,879,936	-				+0.2
3,879,953	+				+0.2