Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03567

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,719,975	+		CCNA_03565	0.44	-0.3
3,719,975	+		CCNA_03565	0.44	-0.2
3,719,975	+		CCNA_03565	0.44	-0.6
3,719,975	+		CCNA_03565	0.44	-1.1
3,719,983	-		CCNA_03565	0.47	-0.1
3,720,001	-		CCNA_03565	0.52	+0.3
3,720,041	-		CCNA_03565	0.65	-0.1
3,720,041	-		CCNA_03565	0.65	+0.0
3,720,059	+		CCNA_03565	0.70	-0.0
3,720,059	+		CCNA_03565	0.70	+0.3
3,720,067	-		CCNA_03565	0.73	-0.3
3,720,086	+		CCNA_03565	0.79	-1.0
3,720,099	-		CCNA_03565	0.83	+0.0
3,720,140	-				+0.2
3,720,169	+				-0.7
3,720,180	+				+0.4
3,720,180	+				+0.2
3,720,209	-				-0.1
3,720,209	-				+0.3
3,720,221	-				-1.0
3,720,235	-				-0.5
3,720,385	-				-0.1
3,720,385	-				-0.3
3,720,406	-				+0.8
3,720,406	-				-0.5
3,720,406	-				+0.1
3,720,419	-				-0.0
3,720,422	+				+0.4
3,720,434	+				+0.3
3,720,434	+				+0.9
3,720,454	+		CCNA_03993	0.13	-0.5
3,720,454	+		CCNA_03993	0.13	-0.0
3,720,462	-		CCNA_03993	0.15	+0.2
3,720,565	+		CCNA_03993	0.40	-0.8
3,720,565	+		CCNA_03993	0.40	+0.6
3,720,608	+		CCNA_03993	0.50	+0.3
3,720,616	-		CCNA_03993	0.52	-0.2
3,720,630	-		CCNA_03993	0.55	+0.4
3,720,630	-		CCNA_03993	0.55	+0.0
3,720,643	+		CCNA_03993	0.58	-1.0
3,720,833	+				+0.5
3,720,833	+				+0.1
3,720,841	-				+0.3
3,720,846	-				+0.3
3,720,860	+				+0.3
3,720,860	+				-0.5
3,720,860	+				+1.5
3,720,868	-				+2.2
3,720,884	+				-0.5
3,720,892	-				+0.7
3,720,920	+				+0.1
3,720,928	-				-0.3
3,720,948	+				-1.5
3,720,991	+				-0.6
3,720,999	-				-0.2
3,721,009	-				-1.0
3,721,061	-				+1.4
3,721,063	+				+0.3
3,721,085	+		CCNA_03567	0.10	-0.4
3,721,085	+		CCNA_03567	0.10	-0.2
3,721,093	-		CCNA_03567	0.11	+0.1
3,721,093	-		CCNA_03567	0.11	-1.3
3,721,093	-		CCNA_03567	0.11	+0.5
3,721,110	+		CCNA_03567	0.12	+0.7
3,721,193	+		CCNA_03567	0.19	+0.1
3,721,193	+		CCNA_03567	0.19	+0.7
3,721,193	+		CCNA_03567	0.19	-2.0
3,721,193	+		CCNA_03567	0.19	+0.3
3,721,193	+		CCNA_03567	0.19	-0.1
3,721,193	+		CCNA_03567	0.19	+0.5
3,721,201	-		CCNA_03567	0.19	-0.3
3,721,201	-		CCNA_03567	0.19	-0.7
3,721,214	+		CCNA_03567	0.20	-0.1
3,721,219	+		CCNA_03567	0.20	+0.1
3,721,227	-		CCNA_03567	0.21	-1.3
3,721,227	-		CCNA_03567	0.21	+0.0
3,721,227	-		CCNA_03567	0.21	-0.6
3,721,266	+		CCNA_03567	0.24	-0.0
3,721,267	+		CCNA_03567	0.24	+0.4
3,721,267	+		CCNA_03567	0.24	+0.5
3,721,267	+		CCNA_03567	0.24	-0.1
3,721,274	-		CCNA_03567	0.25	-1.1
3,721,285	-		CCNA_03567	0.26	-0.1
3,721,408	+		CCNA_03567	0.35	+1.0
3,721,408	+		CCNA_03567	0.35	-0.6
3,721,408	+		CCNA_03567	0.35	-0.7
3,721,416	-		CCNA_03567	0.36	+0.4
3,721,416	-		CCNA_03567	0.36	-1.1
3,721,416	-		CCNA_03567	0.36	+0.2
3,721,416	-		CCNA_03567	0.36	-1.1
3,721,416	-		CCNA_03567	0.36	-0.4
3,721,418	+		CCNA_03567	0.36	-1.0
3,721,426	-		CCNA_03567	0.36	-0.1
3,721,447	+		CCNA_03567	0.38	+0.1
3,721,451	+		CCNA_03567	0.38	+0.7
3,721,451	+		CCNA_03567	0.38	-0.7
3,721,459	-		CCNA_03567	0.39	+0.7
3,721,517	+		CCNA_03567	0.43	-1.3
3,721,539	-		CCNA_03567	0.45	-0.7
3,721,550	-		CCNA_03567	0.46	+0.3
3,721,575	+		CCNA_03567	0.48	-0.2
3,721,575	+		CCNA_03567	0.48	-0.0
3,721,580	+		CCNA_03567	0.48	-0.9
3,721,582	+		CCNA_03567	0.48	+0.3
3,721,584	+		CCNA_03567	0.48	-2.3
3,721,603	+		CCNA_03567	0.50	-2.6
3,721,609	+		CCNA_03567	0.50	+0.8
3,721,614	+		CCNA_03567	0.51	-0.2
3,721,617	-		CCNA_03567	0.51	-0.4
3,721,617	-		CCNA_03567	0.51	+0.2
3,721,652	+		CCNA_03567	0.54	-0.7
3,721,653	+		CCNA_03567	0.54	-0.6
3,721,655	-		CCNA_03567	0.54	+0.4
3,721,659	+		CCNA_03567	0.54	+0.3
3,721,661	-		CCNA_03567	0.54	+0.1
3,721,663	+		CCNA_03567	0.54	-0.2
3,721,702	-		CCNA_03567	0.57	+0.1
3,721,710	+		CCNA_03567	0.58	-1.1
3,721,710	+		CCNA_03567	0.58	-0.5
3,721,718	-		CCNA_03567	0.59	-0.6
3,721,746	+		CCNA_03567	0.61	-0.7
3,721,749	-		CCNA_03567	0.61	+0.1
3,721,753	+		CCNA_03567	0.61	-0.5
3,721,755	-		CCNA_03567	0.61	+0.1
3,721,758	+		CCNA_03567	0.62	-1.1
3,721,758	+		CCNA_03567	0.62	-1.3
3,721,766	-		CCNA_03567	0.62	+0.0
3,721,766	-		CCNA_03567	0.62	-0.7
3,721,805	-		CCNA_03567	0.65	-0.1
3,721,815	+		CCNA_03567	0.66	-0.3
3,721,833	-		CCNA_03567	0.67	+0.3
3,721,928	+		CCNA_03567	0.75	-0.7
3,721,928	+		CCNA_03567	0.75	-2.9
3,721,928	+		CCNA_03567	0.75	-2.0
3,721,962	+		CCNA_03567	0.77	-0.5
3,721,962	+		CCNA_03567	0.77	-1.2
3,721,982	+		CCNA_03567	0.79	-2.1
3,721,982	+		CCNA_03567	0.79	+0.1
3,721,982	-		CCNA_03567	0.79	-0.2
3,721,982	-		CCNA_03567	0.79	+0.3
3,721,982	-		CCNA_03567	0.79	-0.1
3,722,019	+		CCNA_03567	0.82	-0.2
3,722,019	+		CCNA_03567	0.82	-0.4
3,722,041	-		CCNA_03567	0.83	+0.5
3,722,041	-		CCNA_03567	0.83	-0.1
3,722,126	+		CCNA_03567	0.90	-0.1
3,722,126	+		CCNA_03567	0.90	-0.1
3,722,134	-				+0.6
3,722,134	-				-0.2
3,722,172	-				-0.4
3,722,191	-				-0.1
3,722,246	+				-0.1
3,722,246	+				+0.8
3,722,252	+				+0.2
3,722,252	+				+0.7
3,722,259	+				+0.7
3,722,275	-				+0.5
3,722,338	-				+0.7
3,722,358	-				-0.4
3,722,359	+				-0.6
3,722,367	-				-0.7
3,722,367	-				+0.6
3,722,413	+				+0.4
3,722,417	+		CCNA_03568	0.10	-0.7
3,722,425	-		CCNA_03568	0.12	-0.5
3,722,455	+		CCNA_03568	0.16	-0.1
3,722,455	+		CCNA_03568	0.16	-1.4
3,722,463	-		CCNA_03568	0.17	-1.3
3,722,463	-		CCNA_03568	0.17	+0.1
3,722,470	+		CCNA_03568	0.18	-0.1
3,722,550	+		CCNA_03568	0.31	+0.6
3,722,550	+		CCNA_03568	0.31	-0.1
3,722,552	-		CCNA_03568	0.31	-1.3
3,722,553	-		CCNA_03568	0.31	+0.9
3,722,560	+		CCNA_03568	0.32	-0.4
3,722,598	-		CCNA_03568	0.38	-1.4
3,722,614	-		CCNA_03568	0.41	+0.3
3,722,614	-		CCNA_03568	0.41	+0.1
3,722,616	+		CCNA_03568	0.41	-0.8
3,722,616	+		CCNA_03568	0.41	-0.3
3,722,619	-		CCNA_03568	0.41	+0.4
3,722,624	-		CCNA_03568	0.42	+1.0
3,722,624	-		CCNA_03568	0.42	+0.3
3,722,624	-		CCNA_03568	0.42	+0.2
3,722,624	-		CCNA_03568	0.42	-1.2
3,722,624	-		CCNA_03568	0.42	-0.8
3,722,624	-		CCNA_03568	0.42	+0.1
3,722,624	-		CCNA_03568	0.42	+0.0
3,722,624	-		CCNA_03568	0.42	-0.6
3,722,624	-		CCNA_03568	0.42	+0.5
3,722,624	-		CCNA_03568	0.42	+0.3
3,722,630	-		CCNA_03568	0.43	+0.2
3,722,637	-		CCNA_03568	0.44	+0.1
3,722,639	+		CCNA_03568	0.44	+0.7
3,722,655	+		CCNA_03568	0.47	+0.0
3,722,700	+		CCNA_03568	0.54	+0.5
3,722,703	-		CCNA_03568	0.54	-2.0
3,722,706	+		CCNA_03568	0.55	-0.0
3,722,706	+		CCNA_03568	0.55	+0.1
3,722,713	-		CCNA_03568	0.56	+0.3
3,722,714	-		CCNA_03568	0.56	-0.5
3,722,727	+		CCNA_03568	0.58	-0.5
3,722,754	+		CCNA_03568	0.62	-0.6
3,722,759	-		CCNA_03568	0.63	-1.0
3,722,775	+		CCNA_03568	0.65	+1.4
3,722,816	+		CCNA_03568	0.72	+0.5
3,722,830	+		CCNA_03568	0.74	-0.3
3,722,836	-		CCNA_03568	0.75	+0.1
3,722,838	+		CCNA_03568	0.75	-0.8
3,722,841	+		CCNA_03568	0.75	+0.1
3,722,861	+		CCNA_03568	0.78	-0.7
3,722,871	+		CCNA_03568	0.80	-0.2
3,722,874	-		CCNA_03568	0.80	+0.3
3,722,877	+		CCNA_03568	0.81	+0.3
3,722,882	+		CCNA_03568	0.82	+0.1
3,722,886	+		CCNA_03568	0.82	-0.0
3,722,894	-		CCNA_03568	0.84	-0.3
3,722,894	-		CCNA_03568	0.84	-0.2
3,722,894	-		CCNA_03568	0.84	-0.3
3,722,908	+		CCNA_03568	0.86	-0.1
3,722,916	+		CCNA_03568	0.87	+0.2
3,722,935	+		CCNA_03568	0.90	-0.3
3,722,935	+		CCNA_03568	0.90	+0.1
3,722,963	-				+0.7
3,722,992	+				+0.4
3,722,992	+				+0.2
3,723,047	-				-0.0
3,723,047	-				-1.1
3,723,064	-				-0.1
3,723,106	-		CCNA_03569	0.11	-0.1
3,723,138	-		CCNA_03569	0.15	+0.1
3,723,138	-		CCNA_03569	0.15	-0.1
3,723,160	-		CCNA_03569	0.17	-0.3
3,723,162	+		CCNA_03569	0.17	+0.9
3,723,162	+		CCNA_03569	0.17	+0.7
3,723,170	-		CCNA_03569	0.18	+0.0
3,723,170	-		CCNA_03569	0.18	+0.2
3,723,170	-		CCNA_03569	0.18	-0.1
3,723,197	+		CCNA_03569	0.21	-0.6
3,723,205	-		CCNA_03569	0.22	+0.3
3,723,212	+		CCNA_03569	0.23	-0.4