Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03553

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,709,013	+		CCNA_03552	0.18	+0.2
3,709,013	+		CCNA_03552	0.18	+0.4
3,709,021	-		CCNA_03552	0.19	-0.7
3,709,064	+		CCNA_03552	0.22	-0.2
3,709,066	-		CCNA_03552	0.22	-0.5
3,709,144	-		CCNA_03552	0.29	+0.7
3,709,145	-		CCNA_03552	0.29	-0.7
3,709,150	-		CCNA_03552	0.29	-0.6
3,709,207	+		CCNA_03552	0.34	+0.3
3,709,220	-		CCNA_03552	0.35	-0.3
3,709,225	-		CCNA_03552	0.36	-0.3
3,709,308	+		CCNA_03552	0.43	+0.1
3,709,312	+		CCNA_03552	0.43	+0.7
3,709,316	-		CCNA_03552	0.43	-0.8
3,709,340	+		CCNA_03552	0.45	+0.3
3,709,354	-		CCNA_03552	0.47	-0.9
3,709,366	+		CCNA_03552	0.48	-0.1
3,709,366	+		CCNA_03552	0.48	+0.7
3,709,374	-		CCNA_03552	0.48	-0.3
3,709,388	-		CCNA_03552	0.50	+0.2
3,709,398	-		CCNA_03552	0.50	+0.2
3,709,401	+		CCNA_03552	0.51	+0.2
3,709,401	+		CCNA_03552	0.51	+0.4
3,709,430	+		CCNA_03552	0.53	+0.3
3,709,433	-		CCNA_03552	0.53	+0.6
3,709,489	+		CCNA_03552	0.58	-0.2
3,709,489	+		CCNA_03552	0.58	+0.4
3,709,521	-		CCNA_03552	0.61	+0.4
3,709,552	+		CCNA_03552	0.63	+0.2
3,709,571	-		CCNA_03552	0.65	-0.1
3,709,597	+		CCNA_03552	0.67	+0.3
3,709,638	-		CCNA_03552	0.71	+0.3
3,709,640	+		CCNA_03552	0.71	-0.1
3,709,688	-		CCNA_03552	0.75	-1.0
3,709,704	+		CCNA_03552	0.76	+1.2
3,709,717	+		CCNA_03552	0.77	+0.3
3,709,744	-		CCNA_03552	0.80	-1.6
3,709,744	-		CCNA_03552	0.80	-0.4
3,709,758	+		CCNA_03552	0.81	+0.3
3,709,758	+		CCNA_03552	0.81	+0.2
3,709,766	-		CCNA_03552	0.81	-0.0
3,709,836	+		CCNA_03552	0.87	+1.6
3,709,838	+		CCNA_03552	0.88	+0.4
3,709,848	+		CCNA_03552	0.88	+1.0
3,709,883	-				-0.3
3,709,899	-				-0.3
3,709,916	+				-0.0
3,709,953	-				+1.7
3,709,993	+				-0.2
3,710,000	+				-0.5
3,710,000	+				+0.0
3,710,005	+				+0.3
3,710,008	-				+0.3
3,710,022	-				-0.4
3,710,066	-		CCNA_03553	0.11	+0.7
3,710,076	+		CCNA_03553	0.13	-0.2
3,710,089	-		CCNA_03553	0.16	+0.3
3,710,107	+		CCNA_03553	0.19	+0.9
3,710,150	-		CCNA_03553	0.27	+1.3
3,710,226	+		CCNA_03553	0.42	+0.1
3,710,250	-		CCNA_03553	0.47	-0.2
3,710,270	-		CCNA_03553	0.50	-1.8
3,710,271	-		CCNA_03553	0.51	-0.3
3,710,300	+		CCNA_03553	0.56	+0.2
3,710,300	+		CCNA_03553	0.56	+0.1
3,710,310	+		CCNA_03553	0.58	+0.4
3,710,318	-		CCNA_03553	0.60	+0.2
3,710,318	-		CCNA_03553	0.60	+0.6
3,710,433	+		CCNA_03553	0.82	-0.4
3,710,433	-		CCNA_03553	0.82	-2.2
3,710,455	+		CCNA_03553	0.86	-0.3
3,710,470	+		CCNA_03553	0.89	+0.0
3,710,476	+				-0.4
3,710,478	-				+0.2
3,710,520	+				-0.0
3,710,554	+				+1.0
3,710,554	+				+0.3
3,710,562	-				-0.0
3,710,562	-				+0.0
3,710,574	+				+0.5
3,710,575	+				+0.2
3,710,598	+				+0.2
3,710,598	+				-0.3
3,710,598	+				-0.2
3,710,598	+				-1.7
3,710,598	+				+1.0
3,710,598	+				-1.1
3,710,606	-				-0.2
3,710,606	-				-0.4
3,710,606	-				-0.5
3,710,606	-				-0.3
3,710,606	-				+0.3
3,710,606	-				-0.3
3,710,606	-				-0.7
3,710,613	-				-1.8
3,710,637	+				-1.5
3,710,663	+		CCNA_03554	0.10	-0.1
3,710,664	+		CCNA_03554	0.10	+0.9
3,710,691	-		CCNA_03554	0.12	-0.1
3,710,696	-		CCNA_03554	0.13	-0.7
3,710,732	-		CCNA_03554	0.16	-0.0
3,710,733	-		CCNA_03554	0.16	+0.0
3,710,734	-		CCNA_03554	0.16	+1.3
3,710,740	+		CCNA_03554	0.16	+0.3
3,710,783	-		CCNA_03554	0.19	-0.4
3,710,822	+		CCNA_03554	0.22	-0.4
3,710,822	+		CCNA_03554	0.22	+0.0
3,710,882	-		CCNA_03554	0.27	+0.3
3,710,901	+		CCNA_03554	0.28	-1.1
3,710,919	+		CCNA_03554	0.30	+0.1
3,710,922	-		CCNA_03554	0.30	+0.7
3,710,986	+		CCNA_03554	0.35	-0.1
3,710,994	-		CCNA_03554	0.35	+0.1
3,711,012	+		CCNA_03554	0.37	+0.4
3,711,025	+		CCNA_03554	0.38	+0.0
3,711,033	-		CCNA_03554	0.38	-0.7
3,711,042	+		CCNA_03554	0.39	-0.0
3,711,043	+		CCNA_03554	0.39	-0.0
3,711,051	-		CCNA_03554	0.40	+0.7
3,711,144	+		CCNA_03554	0.47	+0.3
3,711,165	-		CCNA_03554	0.48	-0.6
3,711,190	-		CCNA_03554	0.50	-0.4
3,711,326	-		CCNA_03554	0.61	+0.9
3,711,438	+		CCNA_03554	0.69	+0.6
3,711,438	+		CCNA_03554	0.69	+0.5
3,711,438	+		CCNA_03554	0.69	+0.3
3,711,446	-		CCNA_03554	0.70	-0.1
3,711,446	-		CCNA_03554	0.70	-0.1
3,711,446	-		CCNA_03554	0.70	+1.4
3,711,480	+		CCNA_03554	0.72	+0.4
3,711,488	-		CCNA_03554	0.73	-0.3
3,711,488	-		CCNA_03554	0.73	+0.3