Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03548

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,703,266	+		CCNA_03547	0.16	-2.5
3,703,320	+		CCNA_03547	0.21	-0.3
3,703,651	-		CCNA_03547	0.53	-2.4
3,703,675	+		CCNA_03547	0.55	-0.5
3,703,710	-		CCNA_03547	0.58	-0.0
3,703,754	+		CCNA_03547	0.62	+1.1
3,703,759	-		CCNA_03547	0.63	-0.7
3,703,848	+		CCNA_03547	0.71	-0.9
3,703,940	+		CCNA_03547	0.80	+0.5
3,704,019	+		CCNA_03547	0.88	+0.1
3,704,048	+				+1.8
3,704,056	+				-0.1
3,704,057	+				-1.4
3,704,082	+				-1.6
3,704,095	+				+1.7
3,704,137	+				-1.0
3,704,199	+				+0.1
3,704,199	+				-3.1
3,704,199	+				-0.2
3,704,199	+				-0.4
3,704,199	+				+0.5
3,704,199	+				+2.1
3,704,207	-				-0.1
3,704,207	-				+0.7
3,704,207	-				+1.2
3,704,209	+				-0.5
3,704,211	+				+1.4
3,704,223	+				-0.4
3,704,238	+				-0.1
3,704,238	+				+0.7
3,704,238	+				-0.7
3,704,246	-				-1.7
3,704,246	-				-1.0
3,704,248	-				-0.8
3,704,320	+				+0.7
3,704,328	-				-1.6
3,704,396	-				+0.1
3,704,398	+				-1.3
3,704,400	+				-0.7
3,704,410	+		CCNA_03548	0.11	+0.5
3,704,419	-		CCNA_03548	0.11	+0.7
3,704,451	+		CCNA_03548	0.13	+0.1
3,704,469	-		CCNA_03548	0.15	+0.3
3,704,469	-		CCNA_03548	0.15	-1.3
3,704,473	+		CCNA_03548	0.15	-1.6
3,704,483	+		CCNA_03548	0.16	-0.9
3,704,491	-		CCNA_03548	0.16	+0.3
3,704,519	+		CCNA_03548	0.18	-1.8
3,704,527	-		CCNA_03548	0.19	-0.1
3,704,527	-		CCNA_03548	0.19	-0.8
3,704,567	+		CCNA_03548	0.22	+0.3
3,704,567	+		CCNA_03548	0.22	-0.1
3,704,575	-		CCNA_03548	0.22	-0.3
3,704,595	+		CCNA_03548	0.24	-0.7
3,704,624	+		CCNA_03548	0.26	-2.4
3,704,690	-		CCNA_03548	0.31	+0.7
3,704,752	-		CCNA_03548	0.35	-1.3
3,704,944	+		CCNA_03548	0.49	+0.1
3,704,951	+		CCNA_03548	0.49	-2.6
3,705,023	+		CCNA_03548	0.54	+0.3
3,705,023	+		CCNA_03548	0.54	-0.5
3,705,047	+		CCNA_03548	0.56	+0.7
3,705,062	+		CCNA_03548	0.57	-0.8
3,705,077	-		CCNA_03548	0.58	-0.9
3,705,177	-		CCNA_03548	0.66	+0.7
3,705,199	+		CCNA_03548	0.67	-0.5
3,705,207	-		CCNA_03548	0.68	+0.3
3,705,212	-		CCNA_03548	0.68	-0.5
3,705,219	+		CCNA_03548	0.69	+0.3
3,705,290	+		CCNA_03548	0.74	+0.7
3,705,298	+		CCNA_03548	0.74	-0.3
3,705,298	+		CCNA_03548	0.74	-0.3
3,705,356	+		CCNA_03548	0.78	-1.6
3,705,386	+		CCNA_03548	0.81	-0.3
3,705,495	+		CCNA_03548	0.88	-1.1
3,705,611	-				-0.7
3,705,655	-				-0.2
3,705,714	-				-0.3
3,705,740	+				-0.1
3,705,740	+				+0.2
3,705,766	-				+0.5
3,705,773	+				-0.4
3,705,773	+				-1.0
3,705,773	+				-0.5
3,705,781	-				+0.5
3,705,781	-				-0.1
3,705,808	+				-0.0
3,705,808	+				-0.2
3,705,816	-				+0.1
3,705,836	-				+0.2
3,705,840	-				-0.1
3,705,860	+				-0.1
3,705,933	-				+0.5
3,705,998	+		CCNA_03549	0.11	+0.3
3,706,007	-		CCNA_03549	0.11	+0.5
3,706,021	+		CCNA_03549	0.12	-0.2
3,706,029	-		CCNA_03549	0.12	+1.3
3,706,045	+		CCNA_03549	0.13	-0.9
3,706,053	-		CCNA_03549	0.13	+0.6
3,706,053	-		CCNA_03549	0.13	-0.5
3,706,093	+		CCNA_03549	0.15	+0.0
3,706,106	-		CCNA_03549	0.15	+0.2
3,706,132	+		CCNA_03549	0.16	-0.5
3,706,132	+		CCNA_03549	0.16	-0.8
3,706,132	+		CCNA_03549	0.16	-0.1
3,706,162	+		CCNA_03549	0.17	-0.0
3,706,162	+		CCNA_03549	0.17	-2.3
3,706,187	-		CCNA_03549	0.19	-0.8
3,706,198	-		CCNA_03549	0.19	-1.8
3,706,238	+		CCNA_03549	0.21	+0.3
3,706,238	+		CCNA_03549	0.21	-0.1
3,706,238	+		CCNA_03549	0.21	-1.9
3,706,238	+		CCNA_03549	0.21	+0.0
3,706,238	+		CCNA_03549	0.21	-0.4
3,706,238	+		CCNA_03549	0.21	+0.4
3,706,238	+		CCNA_03549	0.21	-1.0
3,706,238	+		CCNA_03549	0.21	+0.0
3,706,238	+		CCNA_03549	0.21	+0.7
3,706,238	+		CCNA_03549	0.21	+0.3
3,706,238	+		CCNA_03549	0.21	+1.4
3,706,246	-		CCNA_03549	0.21	-0.6
3,706,246	-		CCNA_03549	0.21	-0.3
3,706,246	-		CCNA_03549	0.21	+0.7
3,706,246	-		CCNA_03549	0.21	-0.7
3,706,246	-		CCNA_03549	0.21	-0.1
3,706,246	-		CCNA_03549	0.21	-0.5
3,706,246	-		CCNA_03549	0.21	-1.1
3,706,246	-		CCNA_03549	0.21	-1.8
3,706,246	-		CCNA_03549	0.21	-0.4
3,706,248	+		CCNA_03549	0.21	+0.1
3,706,251	-		CCNA_03549	0.21	+0.6
3,706,281	-		CCNA_03549	0.22	-0.5
3,706,281	-		CCNA_03549	0.22	-0.2
3,706,303	-		CCNA_03549	0.23	-0.9
3,706,315	-		CCNA_03549	0.24	-0.0
3,706,325	-		CCNA_03549	0.24	-1.4
3,706,448	+		CCNA_03549	0.29	+0.2
3,706,521	+		CCNA_03549	0.32	-0.7
3,706,528	+		CCNA_03549	0.33	-0.8
3,706,529	-		CCNA_03549	0.33	+0.2
3,706,536	-		CCNA_03549	0.33	-2.4
3,706,576	+		CCNA_03549	0.35	-0.9
3,706,582	-		CCNA_03549	0.35	-1.4
3,706,589	-		CCNA_03549	0.35	-1.5