Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03542

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,697,945	+		CCNA_03540	0.82	+0.1
3,697,963	-		CCNA_03540	0.84	-0.9
3,697,968	-		CCNA_03540	0.85	+2.0
3,697,995	+		CCNA_03540	0.89	+0.3
3,698,022	+				-0.1
3,698,027	+				-0.4
3,698,030	-				-1.8
3,698,030	-				+0.8
3,698,035	-				-0.5
3,698,067	-				+0.1
3,698,087	+				+0.3
3,698,095	-				+0.8
3,698,095	-				-0.4
3,698,121	+				+0.5
3,698,123	-				+0.2
3,698,149	+				+0.3
3,698,191	-		CCNA_03541	0.13	+0.4
3,698,231	+		CCNA_03541	0.17	-0.9
3,698,234	-		CCNA_03541	0.18	-1.4
3,698,234	-		CCNA_03541	0.18	+0.6
3,698,239	-		CCNA_03541	0.18	+1.1
3,698,273	-		CCNA_03541	0.22	+0.7
3,698,297	-		CCNA_03541	0.25	-0.5
3,698,312	+		CCNA_03541	0.27	+0.8
3,698,312	+		CCNA_03541	0.27	+0.8
3,698,312	+		CCNA_03541	0.27	-0.5
3,698,320	-		CCNA_03541	0.28	+1.0
3,698,320	-		CCNA_03541	0.28	+0.7
3,698,320	-		CCNA_03541	0.28	-0.7
3,698,320	-		CCNA_03541	0.28	-0.4
3,698,355	+		CCNA_03541	0.32	-0.3
3,698,355	+		CCNA_03541	0.32	+0.4
3,698,363	-		CCNA_03541	0.33	+0.7
3,698,408	+		CCNA_03541	0.38	+0.2
3,698,408	+		CCNA_03541	0.38	+0.3
3,698,408	+		CCNA_03541	0.38	-0.0
3,698,416	-		CCNA_03541	0.39	+0.5
3,698,422	-		CCNA_03541	0.40	-0.6
3,698,474	+		CCNA_03541	0.46	+0.7
3,698,475	+		CCNA_03541	0.46	-1.8
3,698,475	+		CCNA_03541	0.46	+0.4
3,698,483	-		CCNA_03541	0.47	-0.2
3,698,512	-		CCNA_03541	0.51	+0.3
3,698,519	+		CCNA_03541	0.52	-0.3
3,698,530	+		CCNA_03541	0.53	+0.3
3,698,540	+		CCNA_03541	0.54	-0.4
3,698,548	-		CCNA_03541	0.55	-0.4
3,698,578	+		CCNA_03541	0.59	+0.8
3,698,586	-		CCNA_03541	0.60	+0.0
3,698,606	+		CCNA_03541	0.62	-1.0
3,698,606	+		CCNA_03541	0.62	+1.6
3,698,606	+		CCNA_03541	0.62	+0.4
3,698,606	+		CCNA_03541	0.62	-1.2
3,698,614	-		CCNA_03541	0.63	+0.5
3,698,614	-		CCNA_03541	0.63	-1.6
3,698,655	+		CCNA_03541	0.68	+0.2
3,698,660	+		CCNA_03541	0.68	-1.2
3,698,660	+		CCNA_03541	0.68	+1.4
3,698,660	+		CCNA_03541	0.68	-0.0
3,698,660	+		CCNA_03541	0.68	+0.3
3,698,660	+		CCNA_03541	0.68	-0.6
3,698,660	+		CCNA_03541	0.68	-0.4
3,698,668	-		CCNA_03541	0.69	+0.1
3,698,668	-		CCNA_03541	0.69	-0.5
3,698,668	-		CCNA_03541	0.69	+0.1
3,698,668	-		CCNA_03541	0.69	-0.9
3,698,685	-		CCNA_03541	0.71	+2.0
3,698,687	+		CCNA_03541	0.72	+0.4
3,698,725	+		CCNA_03541	0.76	-1.8
3,698,730	+		CCNA_03541	0.77	+0.3
3,698,738	-		CCNA_03541	0.78	+0.7
3,698,743	-		CCNA_03541	0.78	+0.9
3,698,743	-		CCNA_03541	0.78	-0.8
3,698,743	-		CCNA_03541	0.78	+0.7
3,698,761	+		CCNA_03541	0.80	+0.5
3,698,764	-		CCNA_03541	0.81	-0.1
3,698,769	-		CCNA_03541	0.81	-0.5
3,698,782	+		CCNA_03541	0.83	+0.3
3,698,796	+		CCNA_03541	0.85	-0.9
3,698,803	+		CCNA_03541	0.85	+1.3
3,698,804	-		CCNA_03541	0.86	-0.3
3,698,818	+		CCNA_03541	0.87	+1.2
3,698,828	+		CCNA_03541	0.88	-0.2
3,698,842	-				+0.1
3,698,844	+				+1.2
3,698,900	+				-1.5
3,698,900	+				+0.7
3,698,901	+				-0.5
3,698,933	+				-0.9
3,698,933	+				+0.1
3,698,941	-				-0.3
3,698,941	-				-0.7
3,698,977	+		CCNA_03542	0.13	-0.7
3,698,987	+		CCNA_03542	0.15	+0.7
3,699,005	-		CCNA_03542	0.18	-0.8
3,699,136	+		CCNA_03542	0.41	-0.1
3,699,231	+		CCNA_03542	0.58	-0.7
3,699,239	-		CCNA_03542	0.59	-1.0
3,699,251	+		CCNA_03542	0.61	-0.3
3,699,290	-		CCNA_03542	0.68	+0.7
3,699,311	-		CCNA_03542	0.72	-1.1
3,699,313	-		CCNA_03542	0.72	-0.0
3,699,355	-		CCNA_03542	0.80	-0.9
3,699,355	-		CCNA_03542	0.80	-0.1
3,699,406	-		CCNA_03542	0.89	-1.3
3,699,439	+				-0.1
3,699,445	+				-0.0
3,699,445	+				-0.1
3,699,445	+				+0.1
3,699,450	+				-0.3
3,699,450	+				-0.1
3,699,450	+				+0.1
3,699,450	+				+0.2
3,699,450	+				-0.4
3,699,450	+				+1.4
3,699,450	+				+0.4
3,699,450	+				-0.9
3,699,450	+				-0.0
3,699,450	+				+1.8
3,699,450	+				+0.4
3,699,450	+				-0.3
3,699,450	+				-0.4
3,699,453	-				-1.8
3,699,455	+				-0.1
3,699,458	-				-2.0
3,699,458	-				-0.6
3,699,458	-				+0.4
3,699,458	-				-0.9
3,699,458	-				-1.7
3,699,458	-				-0.2
3,699,479	+				-1.4
3,699,479	+				-0.2
3,699,487	-				+0.6
3,699,503	+				-0.2
3,699,524	+				-0.0
3,699,534	+				+0.2
3,699,537	-				+1.0
3,699,549	-				-0.8
3,699,566	+				-0.3
3,699,566	+				+0.1
3,699,574	-				-2.0
3,699,574	-				-1.9
3,699,574	-				+0.1
3,699,574	-				-1.2
3,699,585	+				+0.2
3,699,654	+				-1.6
3,699,654	+				+1.1
3,699,654	+				-0.5
3,699,662	-				-0.4
3,699,670	+				+0.3
3,699,724	+				+0.1
3,699,783	-				+1.5
3,699,799	+				-0.3
3,699,799	+				+0.5
3,699,807	-				-0.2
3,699,807	-				-0.4
3,699,807	-				-1.2
3,699,807	-				-0.6
3,699,835	-				-0.4
3,699,847	+				-0.8
3,699,855	-				+0.1
3,699,857	-				+0.2
3,699,884	+				+0.9
3,699,884	+				-0.1
3,699,892	-				-1.2
3,699,894	+				+1.6
3,699,905	-				-0.6
3,699,905	-				+0.1
3,699,905	-				+0.7
3,699,915	+				-0.2
3,699,923	+				+0.4
3,700,029	+				-0.1
3,700,029	+				-0.3
3,700,029	+				+0.3
3,700,036	-				-1.1
3,700,149	+				-0.2
3,700,257	+		CCNA_03543	0.15	+0.5
3,700,257	+		CCNA_03543	0.15	+0.9
3,700,265	-		CCNA_03543	0.16	+0.1
3,700,287	-		CCNA_03543	0.17	+1.7
3,700,304	+		CCNA_03543	0.19	+0.9
3,700,312	+		CCNA_03543	0.19	+0.1
3,700,330	+		CCNA_03543	0.21	+1.3
3,700,340	-		CCNA_03543	0.21	+0.0
3,700,346	-		CCNA_03543	0.22	-0.8
3,700,389	-		CCNA_03543	0.25	-0.3
3,700,400	-		CCNA_03543	0.26	+0.7
3,700,407	-		CCNA_03543	0.27	-0.9
3,700,449	-		CCNA_03543	0.30	-0.1
3,700,460	+		CCNA_03543	0.31	-1.9
3,700,460	+		CCNA_03543	0.31	-0.3
3,700,468	-		CCNA_03543	0.32	+0.6