Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03398

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,567,948	+		CCNA_03396	0.63	-0.7
3,567,965	+		CCNA_03396	0.64	-0.5
3,567,968	-		CCNA_03396	0.64	+0.1
3,567,973	-		CCNA_03396	0.65	+0.4
3,568,028	+		CCNA_03396	0.68	+0.2
3,568,060	-		CCNA_03396	0.70	-0.1
3,568,066	+		CCNA_03396	0.70	-0.1
3,568,074	-		CCNA_03396	0.71	-0.1
3,568,118	+		CCNA_03396	0.73	+0.3
3,568,118	+		CCNA_03396	0.73	+0.3
3,568,150	-		CCNA_03396	0.75	+0.9
3,568,153	+		CCNA_03396	0.75	+2.1
3,568,161	-		CCNA_03396	0.76	+0.9
3,568,176	-		CCNA_03396	0.77	-0.3
3,568,263	+		CCNA_03396	0.82	+1.0
3,568,279	+		CCNA_03396	0.82	+0.6
3,568,279	+		CCNA_03396	0.82	-0.9
3,568,282	-		CCNA_03396	0.83	-1.7
3,568,291	+		CCNA_03396	0.83	-0.6
3,568,291	+		CCNA_03396	0.83	-0.5
3,568,291	+		CCNA_03396	0.83	+0.0
3,568,291	+		CCNA_03396	0.83	+0.3
3,568,291	+		CCNA_03396	0.83	+1.5
3,568,291	+		CCNA_03396	0.83	+0.0
3,568,299	-		CCNA_03396	0.84	+0.1
3,568,299	-		CCNA_03396	0.84	+0.1
3,568,325	-		CCNA_03396	0.85	+0.0
3,568,342	+		CCNA_03396	0.86	-0.7
3,568,360	-		CCNA_03396	0.87	+0.0
3,568,360	-		CCNA_03396	0.87	-0.2
3,568,415	+				-0.1
3,568,467	-				+0.4
3,568,504	+				+0.6
3,568,592	-				+0.4
3,568,602	-				-0.8
3,568,703	-		CCNA_03397	0.40	+0.5
3,568,780	+		CCNA_03397	0.74	-1.4
3,568,784	+		CCNA_03397	0.75	-1.1
3,568,816	+		CCNA_03397	0.89	-0.6
3,568,854	+				-0.3
3,568,861	-				-0.3
3,568,862	+				+0.5
3,568,870	-				+0.6
3,568,870	-				-0.0
3,568,878	+				+0.3
3,568,895	-				-0.3
3,568,903	-				-0.1
3,568,921	+				+0.0
3,568,921	+				-1.2
3,568,935	+				+0.3
3,568,935	+				+0.4
3,568,943	-				-0.6
3,568,943	-				+0.5
3,568,943	-				-1.2
3,568,943	-				+0.9
3,568,943	-				+0.2
3,568,943	-				-0.1
3,568,943	-				+0.6
3,568,943	-				+0.0
3,568,989	+		CCNA_03398	0.16	-0.4
3,568,997	-		CCNA_03398	0.18	+0.5
3,569,008	-		CCNA_03398	0.20	-0.4
3,569,033	+		CCNA_03398	0.24	+0.3
3,569,176	+		CCNA_03398	0.50	-0.5
3,569,184	-		CCNA_03398	0.52	-0.0
3,569,188	-		CCNA_03398	0.52	-0.2
3,569,229	+		CCNA_03398	0.60	+0.3
3,569,232	-		CCNA_03398	0.60	+0.1
3,569,232	-		CCNA_03398	0.60	+0.3
3,569,237	-		CCNA_03398	0.61	+0.2
3,569,237	-		CCNA_03398	0.61	+0.0
3,569,242	-		CCNA_03398	0.62	+0.3
3,569,251	+		CCNA_03398	0.64	+0.2
3,569,251	+		CCNA_03398	0.64	-0.0
3,569,259	-		CCNA_03398	0.65	+0.2
3,569,259	-		CCNA_03398	0.65	+0.5
3,569,259	-		CCNA_03398	0.65	+0.3
3,569,259	-		CCNA_03398	0.65	+0.2
3,569,259	-		CCNA_03398	0.65	+0.0
3,569,261	+		CCNA_03398	0.66	+0.7
3,569,317	+		CCNA_03398	0.76	-0.5
3,569,354	-		CCNA_03398	0.82	+0.4
3,569,355	-		CCNA_03398	0.83	+0.3
3,569,374	+		CCNA_03398	0.86	+0.3
3,569,382	-				+0.6
3,569,389	-				+0.8
3,569,389	-				+0.8
3,569,433	+				-0.9
3,569,578	-		CCNA_03399	0.33	-1.8
3,569,639	-		CCNA_03399	0.42	+0.3
3,569,708	+		CCNA_03399	0.54	+0.4
3,569,711	-		CCNA_03399	0.54	-0.2
3,569,711	-		CCNA_03399	0.54	-0.8
3,569,716	-		CCNA_03399	0.55	-0.3
3,569,723	+		CCNA_03399	0.56	-0.2
3,569,789	+		CCNA_03399	0.67	+2.2
3,569,789	+		CCNA_03399	0.67	-0.6
3,569,842	+		CCNA_03399	0.75	+0.8
3,569,842	+		CCNA_03399	0.75	+0.3
3,569,849	-		CCNA_03399	0.76	-0.6
3,570,069	-				+0.2
3,570,114	+				+0.6
3,570,121	+				+0.9
3,570,129	-				+0.8
3,570,158	-		CCNA_03400	0.20	+0.3
3,570,223	+		CCNA_03400	0.57	+0.3
3,570,234	+		CCNA_03400	0.63	+0.4
3,570,375	+				-2.3
3,570,376	+				-0.6
3,570,383	-				+0.4
3,570,383	-				-0.7
3,570,441	-				-0.6
3,570,441	-				+0.7