Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03354

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,531,162	-				+0.3
3,531,176	-				-1.0
3,531,227	-				-0.7
3,531,357	-				-0.2
3,531,384	+		CCNA_03353	0.10	-2.1
3,531,395	+		CCNA_03353	0.12	-0.0
3,531,403	-		CCNA_03353	0.13	-3.0
3,531,411	+		CCNA_03353	0.14	-1.1
3,531,437	+		CCNA_03353	0.17	-1.6
3,531,437	+		CCNA_03353	0.17	-0.3
3,531,445	-		CCNA_03353	0.18	-1.6
3,531,496	+		CCNA_03353	0.24	-2.5
3,531,496	+		CCNA_03353	0.24	-0.3
3,531,504	-		CCNA_03353	0.25	-1.3
3,531,504	-		CCNA_03353	0.25	+0.7
3,531,504	-		CCNA_03353	0.25	-2.1
3,531,506	+		CCNA_03353	0.25	-1.4
3,531,528	+		CCNA_03353	0.28	-0.3
3,531,544	+		CCNA_03353	0.29	-0.7
3,531,544	+		CCNA_03353	0.29	-0.2
3,531,552	-		CCNA_03353	0.30	-0.9
3,531,557	-		CCNA_03353	0.31	-0.6
3,531,557	-		CCNA_03353	0.31	+0.1
3,531,559	-		CCNA_03353	0.31	-1.5
3,531,576	+		CCNA_03353	0.33	-1.1
3,531,609	+		CCNA_03353	0.37	-0.4
3,531,616	+		CCNA_03353	0.38	+0.4
3,531,622	+		CCNA_03353	0.39	-1.1
3,531,653	+		CCNA_03353	0.43	+0.4
3,531,655	+		CCNA_03353	0.43	+0.6
3,531,655	+		CCNA_03353	0.43	+0.2
3,531,698	+		CCNA_03353	0.48	-1.4
3,531,706	-		CCNA_03353	0.49	-0.7
3,531,706	-		CCNA_03353	0.49	+0.1
3,531,800	+		CCNA_03353	0.60	-2.4
3,531,882	+		CCNA_03353	0.70	+1.3
3,531,882	+		CCNA_03353	0.70	+0.9
3,531,884	+		CCNA_03353	0.70	-0.2
3,531,884	+		CCNA_03353	0.70	+0.1
3,531,884	+		CCNA_03353	0.70	+1.5
3,531,884	+		CCNA_03353	0.70	-1.7
3,531,884	+		CCNA_03353	0.70	+0.6
3,531,884	+		CCNA_03353	0.70	-0.7
3,531,884	+		CCNA_03353	0.70	-0.6
3,531,884	+		CCNA_03353	0.70	-2.0
3,531,889	+		CCNA_03353	0.71	+1.7
3,531,889	+		CCNA_03353	0.71	-1.5
3,531,889	+		CCNA_03353	0.71	-1.7
3,531,890	-		CCNA_03353	0.71	-0.1
3,531,890	-		CCNA_03353	0.71	-0.6
3,531,890	-		CCNA_03353	0.71	-0.6
3,531,890	-		CCNA_03353	0.71	-0.3
3,531,890	-		CCNA_03353	0.71	-0.1
3,531,892	-		CCNA_03353	0.71	+1.0
3,531,892	-		CCNA_03353	0.71	-0.5
3,531,892	-		CCNA_03353	0.71	-2.0
3,531,892	-		CCNA_03353	0.71	-1.3
3,531,892	-		CCNA_03353	0.71	+0.8
3,531,892	-		CCNA_03353	0.71	-1.4
3,531,892	-		CCNA_03353	0.71	-0.4
3,531,892	-		CCNA_03353	0.71	+1.0
3,531,896	+		CCNA_03353	0.72	-2.3
3,531,897	-		CCNA_03353	0.72	+0.4
3,531,897	-		CCNA_03353	0.72	-0.9
3,531,897	-		CCNA_03353	0.72	+0.3
3,531,906	+		CCNA_03353	0.73	-0.8
3,531,906	+		CCNA_03353	0.73	-0.4
3,531,927	+		CCNA_03353	0.75	+1.1
3,531,947	+		CCNA_03353	0.78	-0.6
3,531,955	-		CCNA_03353	0.79	-0.2
3,531,955	-		CCNA_03353	0.79	-0.7
3,531,955	-		CCNA_03353	0.79	-1.1
3,531,955	-		CCNA_03353	0.79	-0.1
3,531,970	+		CCNA_03353	0.81	-0.9
3,531,978	-		CCNA_03353	0.82	-0.3
3,531,978	-		CCNA_03353	0.82	+1.4
3,531,981	+		CCNA_03353	0.82	-0.1
3,532,047	+		CCNA_03353	0.90	+0.3
3,532,072	+				-0.5
3,532,095	-				-0.1
3,532,142	+				-0.7
3,532,149	+				-0.4
3,532,168	-				-0.3
3,532,209	+				+0.2
3,532,270	-		CCNA_03354	0.18	+1.1
3,532,272	+		CCNA_03354	0.18	-0.6
3,532,275	-		CCNA_03354	0.19	-1.8
3,532,281	-		CCNA_03354	0.20	+0.6
3,532,330	+		CCNA_03354	0.27	-0.1
3,532,333	-		CCNA_03354	0.28	-0.2
3,532,349	+		CCNA_03354	0.30	+0.4
3,532,452	-		CCNA_03354	0.46	-1.4
3,532,516	+		CCNA_03354	0.56	-1.0
3,532,523	-		CCNA_03354	0.57	-0.1
3,532,524	-		CCNA_03354	0.58	-0.4
3,532,529	-		CCNA_03354	0.58	-2.3
3,532,550	+		CCNA_03354	0.62	+1.3
3,532,558	-		CCNA_03354	0.63	-2.5
3,532,589	-		CCNA_03354	0.68	+0.7
3,532,601	+		CCNA_03354	0.69	-1.2
3,532,601	+		CCNA_03354	0.69	-1.6
3,532,601	+		CCNA_03354	0.69	-2.1
3,532,609	-		CCNA_03354	0.71	-1.4
3,532,613	+		CCNA_03354	0.71	+0.8
3,532,627	-		CCNA_03354	0.73	+0.6
3,532,645	+		CCNA_03354	0.76	-1.3
3,532,725	+		CCNA_03354	0.89	-0.4
3,532,738	-				+2.3
3,532,865	-				+0.5
3,532,897	+				-1.0
3,532,990	+				-1.3
3,532,995	+				-0.0
3,533,057	-				-0.4
3,533,062	-				+1.0
3,533,082	+				-1.4
3,533,113	-				+0.5
3,533,114	+				-2.6
3,533,118	-				+0.2
3,533,124	+				+0.3
3,533,146	-				+0.1
3,533,147	-				-0.1
3,533,169	-				+0.7
3,533,174	-				+0.9
3,533,176	+				+0.1
3,533,184	-				-0.7
3,533,203	-				+0.7
3,533,222	+				+0.0
3,533,272	+				-0.3
3,533,272	+				-0.0
3,533,272	+				-0.5
3,533,280	-				+0.3
3,533,280	-				-0.1
3,533,280	-				-0.2
3,533,280	-				+0.3
3,533,354	+		CCNA_03355	0.11	-1.8
3,533,487	+		CCNA_03355	0.18	-1.5
3,533,487	+		CCNA_03355	0.18	-0.9
3,533,487	+		CCNA_03355	0.18	-1.0
3,533,487	+		CCNA_03355	0.18	-2.0
3,533,487	+		CCNA_03355	0.18	-1.2
3,533,495	-		CCNA_03355	0.18	-1.5
3,533,495	-		CCNA_03355	0.18	-0.3
3,533,495	-		CCNA_03355	0.18	-0.5
3,533,495	-		CCNA_03355	0.18	+0.3
3,533,495	-		CCNA_03355	0.18	+0.6
3,533,495	-		CCNA_03355	0.18	+1.0
3,533,517	+		CCNA_03355	0.19	+1.1
3,533,519	+		CCNA_03355	0.19	-0.2
3,533,539	+		CCNA_03355	0.20	-0.5
3,533,551	-		CCNA_03355	0.21	+1.1
3,533,557	-		CCNA_03355	0.21	+0.3
3,533,557	-		CCNA_03355	0.21	+0.5
3,533,583	+		CCNA_03355	0.23	+0.2
3,533,610	+		CCNA_03355	0.24	-0.3
3,533,610	+		CCNA_03355	0.24	-0.3
3,533,618	-		CCNA_03355	0.24	+0.1
3,533,642	-		CCNA_03355	0.26	+0.5
3,533,665	+		CCNA_03355	0.27	-0.7
3,533,694	-		CCNA_03355	0.28	+0.3
3,533,717	+		CCNA_03355	0.29	-0.3
3,533,720	-		CCNA_03355	0.30	+0.2
3,533,720	-		CCNA_03355	0.30	+0.6
3,533,725	-		CCNA_03355	0.30	-0.1
3,533,761	-		CCNA_03355	0.32	-1.0