Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03277

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,442,994	+		CCNA_03276	0.21	-1.0
3,443,001	+		CCNA_03276	0.22	+1.5
3,443,008	-		CCNA_03276	0.23	+0.4
3,443,013	-		CCNA_03276	0.23	-1.4
3,443,027	+		CCNA_03276	0.25	-0.7
3,443,030	-		CCNA_03276	0.25	-0.5
3,443,114	+		CCNA_03276	0.34	+0.6
3,443,166	+		CCNA_03276	0.39	-0.5
3,443,174	-		CCNA_03276	0.40	-0.0
3,443,211	-		CCNA_03276	0.43	+0.1
3,443,211	-		CCNA_03276	0.43	-0.1
3,443,287	-		CCNA_03276	0.51	+0.1
3,443,287	-		CCNA_03276	0.51	-0.0
3,443,287	-		CCNA_03276	0.51	+0.5
3,443,399	+		CCNA_03276	0.62	+0.2
3,443,400	+		CCNA_03276	0.62	+0.7
3,443,417	-		CCNA_03276	0.64	-0.9
3,443,450	-		CCNA_03276	0.67	-0.7
3,443,471	-		CCNA_03276	0.70	+0.1
3,443,519	+		CCNA_03276	0.74	-0.7
3,443,520	+		CCNA_03276	0.75	+0.2
3,443,527	-		CCNA_03276	0.75	-0.1
3,443,576	-		CCNA_03276	0.80	-0.4
3,443,599	+		CCNA_03276	0.83	-0.5
3,443,599	+		CCNA_03276	0.83	-0.0
3,443,599	+		CCNA_03276	0.83	-0.5
3,443,601	+		CCNA_03276	0.83	+0.4
3,443,601	+		CCNA_03276	0.83	-1.0
3,443,609	-		CCNA_03276	0.84	-0.3
3,443,620	+		CCNA_03276	0.85	-0.4
3,443,636	+		CCNA_03276	0.86	+0.1
3,443,644	-		CCNA_03276	0.87	+0.3
3,443,660	+		CCNA_03276	0.89	-2.6
3,443,697	+				-1.6
3,443,751	+				-0.5
3,443,756	+				-0.6
3,443,759	-				+0.3
3,443,759	-				-0.2
3,443,759	-				-0.6
3,443,769	-				-0.8
3,443,801	-				+0.1
3,443,802	+				-0.9
3,443,802	+				-1.7
3,443,802	+				-0.9
3,443,802	+				-0.7
3,443,802	+				-0.3
3,443,802	+				+0.1
3,443,803	-				-0.4
3,443,810	-				+0.7
3,443,810	-				-1.1
3,443,810	-				-0.1
3,443,810	-				+0.3
3,443,841	-				+0.5
3,443,922	+		CCNA_R0075	0.66	-0.0
3,443,922	+		CCNA_R0075	0.66	+0.2
3,443,935	+		CCNA_R0075	0.83	+0.0
3,443,953	-				+0.3
3,443,990	+				-0.1
3,444,023	+				+0.8
3,444,042	+				-0.2
3,444,042	+				+0.8
3,444,080	-				-0.2
3,444,094	+				-0.7
3,444,113	+		CCNA_03277	0.12	-0.1
3,444,152	+		CCNA_03277	0.15	-0.0
3,444,233	+		CCNA_03277	0.23	+0.2
3,444,270	-		CCNA_03277	0.26	-0.9
3,444,270	-		CCNA_03277	0.26	-0.0
3,444,270	-		CCNA_03277	0.26	+0.8
3,444,275	-		CCNA_03277	0.27	-0.2
3,444,353	-		CCNA_03277	0.34	-0.6
3,444,433	+		CCNA_03277	0.42	+0.8
3,444,459	-		CCNA_03277	0.44	-0.7
3,444,491	-		CCNA_03277	0.48	+0.7
3,444,654	-		CCNA_03277	0.63	+0.2
3,444,669	-		CCNA_03277	0.64	-1.5
3,444,671	-		CCNA_03277	0.65	-1.9
3,444,797	+		CCNA_03277	0.77	+0.8
3,444,797	+		CCNA_03277	0.77	+0.4
3,444,797	+		CCNA_03277	0.77	-1.0
3,444,797	+		CCNA_03277	0.77	-0.9
3,444,805	-		CCNA_03277	0.77	-0.0
3,444,805	-		CCNA_03277	0.77	-0.2
3,444,805	-		CCNA_03277	0.77	-1.2
3,444,805	-		CCNA_03277	0.77	-0.1
3,444,842	-		CCNA_03277	0.81	+0.8
3,444,855	+		CCNA_03277	0.82	-0.0
3,444,878	+		CCNA_03277	0.84	+0.8
3,444,886	-		CCNA_03277	0.85	+0.2
3,444,963	-				-0.2
3,444,980	+				+0.8
3,444,990	+				-1.9
3,444,990	+				+0.8
3,444,990	+				-0.2
3,444,990	+				-0.4
3,444,990	+				+1.0
3,444,998	-				-0.4
3,445,044	-				+1.4
3,445,048	+				-1.2
3,445,048	+				+0.3
3,445,056	-				-0.3
3,445,090	+				+0.4
3,445,098	-				-0.3
3,445,098	-				+0.6
3,445,098	-				+0.1
3,445,117	-				+0.0
3,445,122	+				+0.7
3,445,128	-				-0.9
3,445,145	+				-1.7
3,445,157	+				+0.5
3,445,157	+				+0.2
3,445,157	+				-0.6
3,445,165	-				-0.0
3,445,165	-				-0.1
3,445,180	-				+1.2
3,445,201	+				-0.4
3,445,204	-				+0.4
3,445,209	-				+0.3
3,445,209	-				+0.3
3,445,214	-				-0.4
3,445,225	+				+1.0
3,445,228	-				+0.0
3,445,228	-				+0.3
3,445,233	-				+0.0
3,445,293	+		CCNA_03278	0.13	-2.5
3,445,308	+		CCNA_03278	0.14	+0.2
3,445,361	+		CCNA_03278	0.19	-0.5
3,445,369	-		CCNA_03278	0.20	+0.1
3,445,369	-		CCNA_03278	0.20	-1.3
3,445,410	-		CCNA_03278	0.24	+0.8
3,445,428	-		CCNA_03278	0.25	-0.3
3,445,428	-		CCNA_03278	0.25	+0.8
3,445,438	+		CCNA_03278	0.26	-0.3
3,445,438	-		CCNA_03278	0.26	+0.7
3,445,525	-		CCNA_03278	0.34	+0.4
3,445,525	-		CCNA_03278	0.34	-0.5
3,445,542	-		CCNA_03278	0.35	-0.4
3,445,543	-		CCNA_03278	0.35	+0.3
3,445,562	-		CCNA_03278	0.37	-0.6
3,445,617	-		CCNA_03278	0.42	+0.5
3,445,617	-		CCNA_03278	0.42	+0.5
3,445,667	+		CCNA_03278	0.46	-0.1
3,445,680	-		CCNA_03278	0.48	+0.5
3,445,680	-		CCNA_03278	0.48	+0.5
3,445,694	-		CCNA_03278	0.49	-0.1
3,445,788	+		CCNA_03278	0.57	+0.3
3,445,791	-		CCNA_03278	0.58	+0.4
3,445,796	-		CCNA_03278	0.58	-0.0
3,445,846	-		CCNA_03278	0.62	-0.2
3,445,846	-		CCNA_03278	0.62	-1.5
3,445,880	+		CCNA_03278	0.66	-0.8
3,445,880	+		CCNA_03278	0.66	-0.7
3,445,880	+		CCNA_03278	0.66	+0.5
3,445,880	+		CCNA_03278	0.66	+0.2
3,445,883	-		CCNA_03278	0.66	-0.2
3,445,888	-		CCNA_03278	0.66	+0.1
3,445,888	-		CCNA_03278	0.66	-0.0
3,445,888	-		CCNA_03278	0.66	-0.1
3,445,893	-		CCNA_03278	0.67	+0.0
3,445,893	-		CCNA_03278	0.67	+0.7
3,445,928	+		CCNA_03278	0.70	-0.6
3,445,938	+		CCNA_03278	0.71	-0.0
3,445,938	+		CCNA_03278	0.71	+0.4
3,445,949	+		CCNA_03278	0.72	+0.1
3,445,949	+		CCNA_03278	0.72	-0.6
3,445,949	+		CCNA_03278	0.72	-0.1
3,445,949	+		CCNA_03278	0.72	-1.1
3,445,957	-		CCNA_03278	0.72	+0.2
3,445,957	-		CCNA_03278	0.72	-0.1
3,445,986	+		CCNA_03278	0.75	-3.0
3,446,035	+		CCNA_03278	0.79	-0.9
3,446,035	-		CCNA_03278	0.79	+0.4