Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03238

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,401,154	+				-1.0
3,401,157	-				+1.0
3,401,199	+		CCNA_03236	0.10	+0.1
3,401,199	+		CCNA_03236	0.10	-0.3
3,401,207	-		CCNA_03236	0.11	-0.3
3,401,218	+		CCNA_03236	0.12	-0.4
3,401,225	+		CCNA_03236	0.13	+0.3
3,401,226	-		CCNA_03236	0.13	-0.3
3,401,226	-		CCNA_03236	0.13	-0.0
3,401,233	-		CCNA_03236	0.14	-0.6
3,401,249	+		CCNA_03236	0.16	-1.3
3,401,283	+		CCNA_03236	0.20	+0.8
3,401,283	+		CCNA_03236	0.20	-0.0
3,401,283	+		CCNA_03236	0.20	-0.8
3,401,289	-		CCNA_03236	0.21	+0.2
3,401,291	-		CCNA_03236	0.21	+0.4
3,401,296	+		CCNA_03236	0.21	-0.3
3,401,298	+		CCNA_03236	0.22	+0.4
3,401,324	+		CCNA_03236	0.25	-0.3
3,401,326	-		CCNA_03236	0.25	+0.8
3,401,328	-		CCNA_03236	0.25	-0.3
3,401,330	+		CCNA_03236	0.25	-0.3
3,401,337	+		CCNA_03236	0.26	+0.2
3,401,337	+		CCNA_03236	0.26	-1.7
3,401,337	+		CCNA_03236	0.26	-1.0
3,401,345	-		CCNA_03236	0.27	-0.0
3,401,345	-		CCNA_03236	0.27	+0.8
3,401,345	-		CCNA_03236	0.27	+0.0
3,401,345	-		CCNA_03236	0.27	-0.4
3,401,345	-		CCNA_03236	0.27	-0.6
3,401,387	+		CCNA_03236	0.32	-0.6
3,401,411	-		CCNA_03236	0.34	+1.2
3,401,414	+		CCNA_03236	0.35	-1.6
3,401,422	-		CCNA_03236	0.36	+0.8
3,401,435	+		CCNA_03236	0.37	-0.7
3,401,443	-		CCNA_03236	0.38	-0.6
3,401,455	-		CCNA_03236	0.39	-0.1
3,401,457	+		CCNA_03236	0.40	-1.9
3,401,524	+		CCNA_03236	0.47	-0.9
3,401,539	-		CCNA_03236	0.49	-0.2
3,401,540	-		CCNA_03236	0.49	-0.7
3,401,540	-		CCNA_03236	0.49	+1.2
3,401,557	+		CCNA_03236	0.51	+1.2
3,401,562	+		CCNA_03236	0.52	+0.2
3,401,570	-		CCNA_03236	0.53	+0.0
3,401,570	-		CCNA_03236	0.53	-1.4
3,401,641	-		CCNA_03236	0.61	+0.7
3,401,651	-		CCNA_03236	0.62	-0.9
3,401,688	+		CCNA_03236	0.66	-1.8
3,401,688	+		CCNA_03236	0.66	-0.8
3,401,696	-		CCNA_03236	0.67	-0.2
3,401,701	+		CCNA_03236	0.68	+0.0
3,401,701	+		CCNA_03236	0.68	-1.4
3,401,701	+		CCNA_03236	0.68	-1.4
3,401,705	+		CCNA_03236	0.68	+0.4
3,401,709	-		CCNA_03236	0.68	-0.1
3,401,709	-		CCNA_03236	0.68	-0.7
3,401,709	-		CCNA_03236	0.68	+0.6
3,401,776	-		CCNA_03236	0.76	+0.1
3,401,824	+		CCNA_03236	0.82	-0.7
3,401,827	-		CCNA_03236	0.82	-1.2
3,401,886	+		CCNA_03236	0.89	-0.8
3,401,915	-				-1.8
3,401,915	-				-0.0
3,401,974	+				+0.8
3,401,977	+				-0.2
3,402,009	+				-0.2
3,402,046	+				-1.0
3,402,139	-				+0.3
3,402,154	+				-1.1
3,402,162	-				-0.6
3,402,208	+				-0.1
3,402,208	+				+1.0
3,402,208	+				-0.8
3,402,216	-				-0.4
3,402,216	-				+1.0
3,402,300	-		CCNA_03238	0.19	-0.2
3,402,320	-		CCNA_03238	0.21	-0.2
3,402,320	-		CCNA_03238	0.21	-1.4
3,402,320	-		CCNA_03238	0.21	-0.0
3,402,330	+		CCNA_03238	0.22	-2.0
3,402,386	+		CCNA_03238	0.28	-1.7
3,402,386	+		CCNA_03238	0.28	+0.2
3,402,386	+		CCNA_03238	0.28	-0.8
3,402,386	+		CCNA_03238	0.28	+0.0
3,402,386	+		CCNA_03238	0.28	+0.1
3,402,386	+		CCNA_03238	0.28	+1.4
3,402,386	+		CCNA_03238	0.28	-0.6
3,402,387	+		CCNA_03238	0.28	+0.2
3,402,394	-		CCNA_03238	0.29	-0.3
3,402,394	-		CCNA_03238	0.29	+0.4
3,402,394	-		CCNA_03238	0.29	-0.2
3,402,394	-		CCNA_03238	0.29	-0.9
3,402,394	-		CCNA_03238	0.29	+0.3
3,402,394	-		CCNA_03238	0.29	+0.8
3,402,394	-		CCNA_03238	0.29	+0.2
3,402,396	-		CCNA_03238	0.29	-1.2
3,402,420	+		CCNA_03238	0.32	-0.4
3,402,420	+		CCNA_03238	0.32	-1.9
3,402,420	+		CCNA_03238	0.32	-1.0
3,402,420	+		CCNA_03238	0.32	-0.4
3,402,420	+		CCNA_03238	0.32	-1.2
3,402,426	+		CCNA_03238	0.32	-1.2
3,402,428	-		CCNA_03238	0.33	-1.3
3,402,428	-		CCNA_03238	0.33	+0.6
3,402,428	-		CCNA_03238	0.33	-1.0
3,402,428	-		CCNA_03238	0.33	-1.4
3,402,428	-		CCNA_03238	0.33	+0.5
3,402,431	+		CCNA_03238	0.33	-1.6
3,402,431	+		CCNA_03238	0.33	-0.5
3,402,457	+		CCNA_03238	0.36	-1.7
3,402,457	+		CCNA_03238	0.36	-1.4
3,402,457	+		CCNA_03238	0.36	+0.4
3,402,457	+		CCNA_03238	0.36	+0.4
3,402,462	+		CCNA_03238	0.36	-1.6
3,402,462	+		CCNA_03238	0.36	+1.2
3,402,462	+		CCNA_03238	0.36	-0.8
3,402,465	-		CCNA_03238	0.37	+0.3
3,402,467	+		CCNA_03238	0.37	-2.6
3,402,467	+		CCNA_03238	0.37	+0.4
3,402,467	+		CCNA_03238	0.37	-0.9
3,402,467	+		CCNA_03238	0.37	-1.5
3,402,617	-		CCNA_03238	0.53	-0.7
3,402,619	+		CCNA_03238	0.53	-2.3
3,402,625	+		CCNA_03238	0.54	+0.2
3,402,638	-		CCNA_03238	0.55	-0.1
3,402,643	-		CCNA_03238	0.56	-1.1
3,402,666	+		CCNA_03238	0.59	-0.9
3,402,666	+		CCNA_03238	0.59	-1.0
3,402,674	-		CCNA_03238	0.59	-0.8
3,402,687	-		CCNA_03238	0.61	-1.4
3,402,728	+		CCNA_03238	0.65	-0.2
3,402,735	-		CCNA_03238	0.66	+0.1
3,402,738	+		CCNA_03238	0.66	-1.2
3,402,765	-		CCNA_03238	0.69	-0.2
3,402,783	-		CCNA_03238	0.71	+0.0
3,402,786	+		CCNA_03238	0.72	-1.5
3,402,787	+		CCNA_03238	0.72	-1.4
3,402,794	-		CCNA_03238	0.72	-1.1
3,402,795	-		CCNA_03238	0.73	-1.6
3,402,795	-		CCNA_03238	0.73	+0.6
3,402,807	-		CCNA_03238	0.74	-0.6
3,402,807	-		CCNA_03238	0.74	-0.8
3,402,830	-		CCNA_03238	0.76	-1.1
3,402,849	+		CCNA_03238	0.78	-1.1
3,402,861	+		CCNA_03238	0.80	-0.8
3,402,868	+		CCNA_03238	0.80	+0.3
3,402,876	-		CCNA_03238	0.81	-1.0
3,402,876	-		CCNA_03238	0.81	-0.7
3,402,876	-		CCNA_03238	0.81	-0.7
3,402,923	+		CCNA_03238	0.86	-1.5
3,402,930	-		CCNA_03238	0.87	+0.9
3,402,958	+				-0.6
3,402,963	+				+0.6
3,402,968	+				+0.1
3,402,981	-				+1.2
3,403,052	+				-0.0
3,403,061	-				+1.0
3,403,078	-				-0.2
3,403,100	+				+0.1
3,403,100	+				+0.4
3,403,145	-				-0.2
3,403,172	+				+0.3
3,403,173	+				-0.2
3,403,180	-				+1.0
3,403,230	+				+2.3
3,403,232	+				-0.6
3,403,238	+				-0.9
3,403,265	-				+0.8
3,403,303	+		CCNA_03239	0.12	+0.4
3,403,349	-		CCNA_03239	0.16	-1.1
3,403,363	+		CCNA_03239	0.17	-0.7
3,403,368	+		CCNA_03239	0.17	-0.8
3,403,397	-		CCNA_03239	0.20	+0.1
3,403,455	-		CCNA_03239	0.25	+0.8
3,403,455	-		CCNA_03239	0.25	+0.4
3,403,455	-		CCNA_03239	0.25	-1.7
3,403,474	+		CCNA_03239	0.27	-0.6
3,403,544	+		CCNA_03239	0.33	+0.0
3,403,557	-		CCNA_03239	0.35	-0.1
3,403,569	+		CCNA_03239	0.36	+0.1
3,403,569	+		CCNA_03239	0.36	-0.4
3,403,582	-		CCNA_03239	0.37	-0.3
3,403,598	+		CCNA_03239	0.38	+0.3
3,403,620	-		CCNA_03239	0.40	-1.0
3,403,638	+		CCNA_03239	0.42	-1.8
3,403,646	-		CCNA_03239	0.43	+1.5
3,403,646	-		CCNA_03239	0.43	-1.6
3,403,646	-		CCNA_03239	0.43	+1.1
3,403,648	+		CCNA_03239	0.43	-1.2
3,403,655	-		CCNA_03239	0.43	-2.6
3,403,683	+		CCNA_03239	0.46	-1.0
3,403,703	+		CCNA_03239	0.48	+0.4
3,403,711	-		CCNA_03239	0.48	-0.3
3,403,711	-		CCNA_03239	0.48	-0.3
3,403,711	-		CCNA_03239	0.48	-1.4
3,403,711	-		CCNA_03239	0.48	+2.1
3,403,724	-		CCNA_03239	0.50	+0.4
3,403,740	+		CCNA_03239	0.51	-1.0
3,403,740	+		CCNA_03239	0.51	-0.9
3,403,740	+		CCNA_03239	0.51	+0.9
3,403,740	+		CCNA_03239	0.51	-0.9
3,403,742	+		CCNA_03239	0.51	-1.2
3,403,748	-		CCNA_03239	0.52	-1.2
3,403,748	-		CCNA_03239	0.52	-1.1
3,403,748	-		CCNA_03239	0.52	-1.2
3,403,748	-		CCNA_03239	0.52	-0.6
3,403,748	-		CCNA_03239	0.52	-1.0
3,403,755	+		CCNA_03239	0.52	+1.2
3,403,788	+		CCNA_03239	0.55	-1.2
3,403,795	-		CCNA_03239	0.56	-0.2
3,403,796	-		CCNA_03239	0.56	-1.1
3,403,796	-		CCNA_03239	0.56	+0.7
3,403,802	-		CCNA_03239	0.57	-0.3
3,403,810	+		CCNA_03239	0.57	+0.2
3,403,810	+		CCNA_03239	0.57	+0.3
3,403,828	+		CCNA_03239	0.59	+1.0
3,403,832	+		CCNA_03239	0.59	+0.2
3,403,836	-		CCNA_03239	0.60	-2.0
3,403,840	+		CCNA_03239	0.60	-1.0
3,403,860	+		CCNA_03239	0.62	-0.7
3,403,874	-		CCNA_03239	0.63	-0.7
3,403,880	-		CCNA_03239	0.64	-1.0
3,403,919	-		CCNA_03239	0.67	+0.3
3,403,941	-		CCNA_03239	0.69	-0.4
3,404,026	+		CCNA_03239	0.77	-0.6
3,404,045	-		CCNA_03239	0.79	-0.4