Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03138

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,285,022	+		CCNA_03137	0.43	+0.3
3,285,057	-		CCNA_03137	0.46	-0.6
3,285,059	+		CCNA_03137	0.46	-0.6
3,285,062	-		CCNA_03137	0.47	-1.1
3,285,113	-		CCNA_03137	0.51	+0.2
3,285,129	-		CCNA_03137	0.53	+0.4
3,285,266	-		CCNA_03137	0.66	+0.8
3,285,281	-		CCNA_03137	0.67	-0.4
3,285,286	-		CCNA_03137	0.68	-0.2
3,285,286	-		CCNA_03137	0.68	+0.3
3,285,323	+		CCNA_03137	0.71	+0.3
3,285,323	+		CCNA_03137	0.71	+0.2
3,285,328	+		CCNA_03137	0.72	-1.2
3,285,328	+		CCNA_03137	0.72	+1.7
3,285,336	-		CCNA_03137	0.73	-0.2
3,285,336	-		CCNA_03137	0.73	-1.6
3,285,336	-		CCNA_03137	0.73	-0.8
3,285,367	-		CCNA_03137	0.75	+0.2
3,285,388	-		CCNA_03137	0.77	-0.6
3,285,419	+		CCNA_03137	0.80	+0.5
3,285,446	+		CCNA_03137	0.83	-0.6
3,285,446	+		CCNA_03137	0.83	+0.5
3,285,446	+		CCNA_03137	0.83	-0.1
3,285,451	+				+0.7
3,285,454	-				+0.1
3,285,459	-				-0.5
3,285,459	-				-0.7
3,285,488	+				+0.0
3,285,552	-				-0.1
3,285,554	+				-0.1
3,285,563	-				+1.2
3,285,589	-				-0.1
3,285,589	-				+1.0
3,285,605	+				+0.2
3,285,640	+		CCNA_03986	0.49	-0.1
3,285,640	+		CCNA_03986	0.49	-0.9
3,285,648	-		CCNA_03986	0.51	-0.1
3,285,650	+		CCNA_03986	0.52	+0.4
3,285,658	-		CCNA_03986	0.54	+0.5
3,285,658	-		CCNA_03986	0.54	+0.4
3,285,658	-		CCNA_03986	0.54	-0.6
3,285,694	-		CCNA_03986	0.63	-0.1
3,285,697	+		CCNA_03986	0.64	-0.2
3,285,705	-		CCNA_03986	0.66	+0.9
3,285,705	-		CCNA_03986	0.66	-0.0
3,285,707	+		CCNA_03986	0.67	+0.6
3,285,710	-		CCNA_03986	0.67	-0.8
3,285,717	-		CCNA_03986	0.69	+0.1
3,285,741	+		CCNA_03986	0.75	-0.3
3,285,749	+		CCNA_03986	0.78	+0.4
3,285,781	-		CCNA_03986	0.86	+0.8
3,285,781	-		CCNA_03986	0.86	+1.0
3,285,781	-		CCNA_03986	0.86	+0.2
3,285,788	+		CCNA_03986	0.88	-0.1
3,285,789	-		CCNA_03986	0.88	-0.7
3,285,803	+				+0.5
3,285,806	+				+0.6
3,285,835	+				-1.0
3,285,845	+				-1.2
3,285,853	-				+0.4
3,285,860	-				-0.3
3,285,865	-				-1.7
3,285,878	+				-0.7
3,285,878	+				-0.2
3,285,886	-				-0.5
3,285,903	+				-0.2
3,285,983	+				-0.3
3,286,024	-				-0.3
3,286,079	+				+0.2
3,286,162	-				-0.6
3,286,178	+				-1.2
3,286,196	-				+0.1
3,286,255	-		CCNA_03138	0.11	+0.2
3,286,388	+		CCNA_03138	0.17	-0.6
3,286,426	+		CCNA_03138	0.19	+0.4
3,286,477	-		CCNA_03138	0.21	+1.7
3,286,482	-		CCNA_03138	0.22	-1.1
3,286,528	+		CCNA_03138	0.24	-0.7
3,286,580	+		CCNA_03138	0.26	-1.5
3,286,585	+		CCNA_03138	0.26	-0.8
3,286,585	+		CCNA_03138	0.26	+0.2
3,286,593	-		CCNA_03138	0.27	-0.3
3,286,640	+		CCNA_03138	0.29	+0.2
3,286,664	+		CCNA_03138	0.30	+0.4
3,286,664	+		CCNA_03138	0.30	+0.2
3,286,664	+		CCNA_03138	0.30	+0.2
3,286,672	-		CCNA_03138	0.30	-0.7
3,286,673	+		CCNA_03138	0.30	-1.0
3,286,750	-		CCNA_03138	0.34	-0.1
3,286,874	+		CCNA_03138	0.39	-1.9
3,286,874	+		CCNA_03138	0.39	+0.2
3,286,880	+		CCNA_03138	0.40	-3.0
3,286,880	+		CCNA_03138	0.40	-0.2
3,286,944	+		CCNA_03138	0.43	-0.4
3,287,011	+		CCNA_03138	0.46	+0.7
3,287,016	+		CCNA_03138	0.46	-0.1
3,287,027	+		CCNA_03138	0.46	-0.6
3,287,156	-		CCNA_03138	0.52	+0.4
3,287,193	+		CCNA_03138	0.54	+0.2
3,287,229	+		CCNA_03138	0.55	+0.4
3,287,265	+		CCNA_03138	0.57	+0.2
3,287,315	-		CCNA_03138	0.59	-0.2
3,287,333	-		CCNA_03138	0.60	-1.3
3,287,335	+		CCNA_03138	0.60	+0.6
3,287,373	-		CCNA_03138	0.62	-0.3
3,287,428	-		CCNA_03138	0.64	-0.4
3,287,432	+		CCNA_03138	0.65	-0.9
3,287,440	-		CCNA_03138	0.65	-0.1
3,287,572	+		CCNA_03138	0.71	+0.2
3,287,580	-		CCNA_03138	0.71	+0.4
3,287,733	-		CCNA_03138	0.78	+0.7
3,287,822	+		CCNA_03138	0.82	+1.2
3,287,848	-		CCNA_03138	0.83	+1.2
3,287,873	-		CCNA_03138	0.84	-0.2
3,288,040	+				-0.1
3,288,052	+				-0.0
3,288,060	-				-0.6
3,288,082	-				-0.3
3,288,119	+				-0.7
3,288,119	+				-0.1
3,288,119	+				+0.2
3,288,119	+				+1.0
3,288,127	-				+2.7
3,288,127	-				-0.2
3,288,127	-				-1.2
3,288,206	-				+2.6
3,288,212	+				-0.3
3,288,235	-				-1.3
3,288,390	-				+0.2
3,288,392	-				+0.0
3,288,417	+				+1.1
3,288,466	+				+0.6
3,288,486	+				+0.6
3,288,486	+				-0.5
3,288,546	+				+0.2
3,288,554	-				-0.0
3,288,554	-				+0.0
3,288,563	+				-0.5
3,288,566	-				+0.2
3,288,566	-				-0.3
3,288,587	-				-0.0
3,288,590	+				+0.6
3,288,590	+				+1.5
3,288,590	+				-0.2
3,288,590	+				+1.4
3,288,590	+				-0.2
3,288,598	-				+0.1
3,288,633	-				-0.1
3,288,635	+				-1.3
3,288,635	+				-1.1
3,288,643	+				-1.1
3,288,645	+				-0.6
3,288,653	-				+0.2
3,288,689	-		CCNA_03139	0.12	+0.0
3,288,707	-		CCNA_03139	0.13	+0.3
3,288,723	+		CCNA_03139	0.14	-0.8
3,288,778	-		CCNA_03139	0.17	-0.8
3,288,793	-		CCNA_03139	0.17	-0.1
3,288,886	+		CCNA_03139	0.22	-0.9
3,288,908	+		CCNA_03139	0.24	-0.4
3,288,908	+		CCNA_03139	0.24	-0.9
3,288,908	+		CCNA_03139	0.24	+0.0
3,288,916	-		CCNA_03139	0.24	+0.4
3,288,916	-		CCNA_03139	0.24	+0.2
3,288,916	-		CCNA_03139	0.24	-0.0
3,288,916	-		CCNA_03139	0.24	+0.2
3,288,982	+		CCNA_03139	0.28	-0.6
3,288,982	+		CCNA_03139	0.28	-1.4
3,288,990	-		CCNA_03139	0.28	+0.5
3,289,017	-		CCNA_03139	0.30	+0.5
3,289,022	-		CCNA_03139	0.30	+0.2
3,289,024	+		CCNA_03139	0.30	-1.3
3,289,027	-		CCNA_03139	0.30	+1.0
3,289,032	-		CCNA_03139	0.30	+0.1
3,289,053	-		CCNA_03139	0.31	-0.3
3,289,125	+		CCNA_03139	0.35	-0.4
3,289,136	-		CCNA_03139	0.36	+0.4
3,289,154	-		CCNA_03139	0.37	+0.2
3,289,184	+		CCNA_03139	0.39	+0.1
3,289,192	-		CCNA_03139	0.39	-0.0
3,289,192	-		CCNA_03139	0.39	-0.3
3,289,192	-		CCNA_03139	0.39	+0.2
3,289,192	-		CCNA_03139	0.39	+0.2
3,289,192	-		CCNA_03139	0.39	-0.8
3,289,197	+		CCNA_03139	0.39	-1.0
3,289,211	+		CCNA_03139	0.40	-0.8