Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03135

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,281,831	-				+0.2
3,281,831	-				+0.4
3,282,019	+		CCNA_03134	0.27	-1.5
3,282,019	+		CCNA_03134	0.27	-1.7
3,282,019	+		CCNA_03134	0.27	-0.3
3,282,027	-		CCNA_03134	0.28	-0.3
3,282,029	+		CCNA_03134	0.28	+0.3
3,282,029	+		CCNA_03134	0.28	-0.4
3,282,029	+		CCNA_03134	0.28	-0.5
3,282,030	+		CCNA_03134	0.28	-0.1
3,282,037	-		CCNA_03134	0.29	+1.5
3,282,037	-		CCNA_03134	0.29	-0.6
3,282,037	-		CCNA_03134	0.29	-0.1
3,282,037	-		CCNA_03134	0.29	+1.3
3,282,043	-		CCNA_03134	0.30	-0.3
3,282,048	-		CCNA_03134	0.30	-0.7
3,282,065	+		CCNA_03134	0.32	+0.4
3,282,066	+		CCNA_03134	0.32	-0.4
3,282,095	+		CCNA_03134	0.35	-0.5
3,282,095	+		CCNA_03134	0.35	-0.6
3,282,095	+		CCNA_03134	0.35	-0.7
3,282,095	+		CCNA_03134	0.35	+0.3
3,282,095	+		CCNA_03134	0.35	+0.0
3,282,095	+		CCNA_03134	0.35	-0.7
3,282,095	+		CCNA_03134	0.35	+1.3
3,282,103	-		CCNA_03134	0.36	+0.0
3,282,103	-		CCNA_03134	0.36	+0.1
3,282,103	-		CCNA_03134	0.36	+1.0
3,282,153	+		CCNA_03134	0.41	+0.0
3,282,202	+		CCNA_03134	0.45	-0.9
3,282,217	-		CCNA_03134	0.47	-0.4
3,282,217	-		CCNA_03134	0.47	+0.1
3,282,231	+		CCNA_03134	0.48	+0.7
3,282,239	+		CCNA_03134	0.49	-1.3
3,282,239	-		CCNA_03134	0.49	+0.7
3,282,291	+		CCNA_03134	0.54	-0.3
3,282,291	+		CCNA_03134	0.54	-2.5
3,282,299	-		CCNA_03134	0.55	+0.5
3,282,316	-		CCNA_03134	0.57	-2.2
3,282,372	+		CCNA_03134	0.62	+0.1
3,282,373	-		CCNA_03134	0.62	-0.6
3,282,393	-		CCNA_03134	0.64	-0.3
3,282,407	+		CCNA_03134	0.66	-0.1
3,282,407	+		CCNA_03134	0.66	-0.9
3,282,419	+		CCNA_03134	0.67	+0.1
3,282,426	-		CCNA_03134	0.68	+0.1
3,282,458	-		CCNA_03134	0.71	-0.6
3,282,472	+		CCNA_03134	0.72	-0.9
3,282,472	+		CCNA_03134	0.72	-1.1
3,282,472	+		CCNA_03134	0.72	+0.2
3,282,488	+		CCNA_03134	0.74	-0.1
3,282,508	+		CCNA_03134	0.76	-0.3
3,282,516	-		CCNA_03134	0.77	-0.5
3,282,522	-		CCNA_03134	0.77	-0.5
3,282,551	-		CCNA_03134	0.80	+0.0
3,282,572	-		CCNA_03134	0.82	-0.3
3,282,603	+		CCNA_03134	0.85	+0.2
3,282,603	+		CCNA_03134	0.85	-0.9
3,282,611	-		CCNA_03134	0.86	-1.2
3,282,651	+				-0.6
3,282,685	+				+0.3
3,282,685	+				+0.3
3,282,687	-				-0.4
3,282,735	-				-1.4
3,282,737	+				+0.0
3,282,785	+				-0.1
3,282,914	-				+0.4
3,282,935	+				-1.5
3,283,007	+		CCNA_03135	0.15	-0.7
3,283,022	-		CCNA_03135	0.16	-2.3
3,283,033	-		CCNA_03135	0.17	+0.4
3,283,112	-		CCNA_03135	0.23	-0.1
3,283,120	-		CCNA_03135	0.23	+0.6
3,283,227	+		CCNA_03135	0.31	-1.1
3,283,233	+		CCNA_03135	0.32	-0.1
3,283,311	-		CCNA_03135	0.38	-0.3
3,283,348	-		CCNA_03135	0.40	-0.7
3,283,409	-		CCNA_03135	0.45	-1.0
3,283,432	+		CCNA_03135	0.47	-1.1
3,283,437	+		CCNA_03135	0.47	-1.3
3,283,437	+		CCNA_03135	0.47	-1.7
3,283,437	+		CCNA_03135	0.47	+0.7
3,283,445	-		CCNA_03135	0.48	+0.7
3,283,482	+		CCNA_03135	0.50	+0.5
3,283,490	-		CCNA_03135	0.51	+0.4
3,283,549	+		CCNA_03135	0.55	-1.9
3,283,552	-		CCNA_03135	0.56	+0.2
3,283,596	-		CCNA_03135	0.59	-1.3
3,283,608	+		CCNA_03135	0.60	+0.2
3,283,640	+		CCNA_03135	0.62	-2.3
3,283,640	+		CCNA_03135	0.62	-2.3
3,283,648	-		CCNA_03135	0.63	-1.6
3,283,656	+		CCNA_03135	0.63	+0.9
3,283,670	+		CCNA_03135	0.64	-2.3
3,283,708	+		CCNA_03135	0.67	-1.3
3,283,748	-		CCNA_03135	0.70	+0.4
3,283,971	-		CCNA_03135	0.87	-0.7
3,284,076	-				-0.3
3,284,127	-				-1.8
3,284,151	-				-1.2
3,284,374	+		CCNA_03136	0.54	-0.9
3,284,398	+		CCNA_03136	0.60	-0.0
3,284,425	+		CCNA_03136	0.66	+0.3
3,284,425	+		CCNA_03136	0.66	-1.6
3,284,425	+		CCNA_03136	0.66	-0.7
3,284,473	+		CCNA_03136	0.78	-0.6
3,284,473	+		CCNA_03136	0.78	-0.5
3,284,481	-		CCNA_03136	0.80	-1.7
3,284,481	-		CCNA_03136	0.80	+0.9
3,284,537	-				-0.5
3,284,605	+				+0.5
3,284,607	-				+1.3
3,284,613	-				-0.3
3,284,634	+				-0.3
3,284,642	-				-0.6
3,284,658	-				-0.3
3,284,661	+				+0.9
3,284,661	+				+0.1
3,284,667	-				-0.0
3,284,685	-		CCNA_03137	0.11	-1.4
3,284,704	+		CCNA_03137	0.13	+0.7
3,284,731	+		CCNA_03137	0.15	+0.2
3,284,754	-		CCNA_03137	0.18	+0.5
3,284,762	+		CCNA_03137	0.18	+1.3
3,284,770	-		CCNA_03137	0.19	-0.2
3,284,824	-		CCNA_03137	0.24	-0.1
3,284,824	-		CCNA_03137	0.24	-0.5
3,284,831	+		CCNA_03137	0.25	+0.3
3,284,881	+		CCNA_03137	0.30	+0.2
3,284,886	+		CCNA_03137	0.30	+0.3
3,284,886	+		CCNA_03137	0.30	+0.3
3,284,886	+		CCNA_03137	0.30	-0.5
3,284,886	+		CCNA_03137	0.30	+0.2
3,284,889	-		CCNA_03137	0.30	+0.6
3,284,891	+		CCNA_03137	0.31	-0.7
3,284,894	-		CCNA_03137	0.31	-1.1
3,284,896	+		CCNA_03137	0.31	-0.9
3,284,900	-		CCNA_03137	0.31	+0.2
3,284,900	-		CCNA_03137	0.31	-0.9
3,284,902	+		CCNA_03137	0.32	+0.6
3,284,906	+		CCNA_03137	0.32	+0.1
3,284,910	-		CCNA_03137	0.32	-0.7
3,284,914	-		CCNA_03137	0.33	-1.2
3,284,914	-		CCNA_03137	0.33	+0.2
3,284,934	+		CCNA_03137	0.35	-0.1
3,284,939	+		CCNA_03137	0.35	+0.0
3,284,947	-		CCNA_03137	0.36	-0.8
3,285,022	+		CCNA_03137	0.43	+0.3
3,285,057	-		CCNA_03137	0.46	-0.6
3,285,059	+		CCNA_03137	0.46	-0.6
3,285,062	-		CCNA_03137	0.47	-1.1
3,285,113	-		CCNA_03137	0.51	+0.2
3,285,129	-		CCNA_03137	0.53	+0.4