Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03101

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,250,454	-		CCNA_03099	0.15	+0.3
3,250,454	-		CCNA_03099	0.15	-1.1
3,250,454	-		CCNA_03099	0.15	-1.0
3,250,454	-		CCNA_03099	0.15	+1.7
3,250,455	+		CCNA_03099	0.15	+0.5
3,250,456	+		CCNA_03099	0.15	+0.6
3,250,456	+		CCNA_03099	0.15	+1.0
3,250,463	-		CCNA_03099	0.16	+0.4
3,250,465	+		CCNA_03099	0.16	-0.5
3,250,470	+		CCNA_03099	0.17	-1.2
3,250,494	+		CCNA_03099	0.20	+0.1
3,250,497	-		CCNA_03099	0.21	-0.3
3,250,502	-		CCNA_03099	0.21	-0.8
3,250,502	-		CCNA_03099	0.21	+0.2
3,250,528	-		CCNA_03099	0.25	-0.4
3,250,610	-		CCNA_03099	0.36	-0.4
3,250,644	-		CCNA_03099	0.41	-0.3
3,250,652	-		CCNA_03099	0.42	-0.0
3,250,664	+		CCNA_03099	0.43	+0.4
3,250,664	+		CCNA_03099	0.43	-1.0
3,250,671	+		CCNA_03099	0.44	-0.1
3,250,671	+		CCNA_03099	0.44	+0.0
3,250,672	-		CCNA_03099	0.44	-1.0
3,250,672	-		CCNA_03099	0.44	-0.6
3,250,679	-		CCNA_03099	0.45	-0.5
3,250,683	+		CCNA_03099	0.46	+0.7
3,250,711	-		CCNA_03099	0.50	-0.4
3,250,712	-		CCNA_03099	0.50	+0.5
3,250,717	-		CCNA_03099	0.50	-0.5
3,250,764	+		CCNA_03099	0.57	-0.3
3,250,766	-		CCNA_03099	0.57	+0.3
3,250,766	-		CCNA_03099	0.57	-0.0
3,250,797	+		CCNA_03099	0.61	+0.4
3,250,832	-		CCNA_03099	0.66	-0.8
3,250,836	+		CCNA_03099	0.67	-0.7
3,250,887	+		CCNA_03099	0.73	-0.9
3,250,893	+		CCNA_03099	0.74	-0.2
3,250,893	+		CCNA_03099	0.74	-1.1
3,250,982	-		CCNA_03099	0.86	-0.6
3,251,060	-				+0.1
3,251,089	+				-1.2
3,251,108	-				-0.7
3,251,121	+				-1.5
3,251,121	+				-0.4
3,251,127	+				-0.8
3,251,171	+		CCNA_03100	0.17	+0.7
3,251,186	+		CCNA_03100	0.23	+0.5
3,251,186	+		CCNA_03100	0.23	-0.0
3,251,187	+		CCNA_03100	0.24	+0.4
3,251,192	+		CCNA_03100	0.26	-1.0
3,251,192	+		CCNA_03100	0.26	-0.8
3,251,192	+		CCNA_03100	0.26	+0.4
3,251,245	-		CCNA_03100	0.50	-1.1
3,251,263	+		CCNA_03100	0.58	-1.6
3,251,276	+		CCNA_03100	0.64	+0.3
3,251,276	+		CCNA_03100	0.64	+0.2
3,251,276	+		CCNA_03100	0.64	+0.1
3,251,284	-		CCNA_03100	0.68	+0.3
3,251,284	-		CCNA_03100	0.68	+1.0
3,251,293	-		CCNA_03100	0.72	-0.7
3,251,295	+		CCNA_03100	0.73	-0.7
3,251,303	-		CCNA_03100	0.76	+0.7
3,251,322	-		CCNA_03100	0.85	-0.4
3,251,361	-				-0.4
3,251,420	+				-0.1
3,251,458	-				-0.9
3,251,458	-				-1.3
3,251,531	-				-0.1
3,251,531	-				+0.4
3,251,564	+		CCNA_03101	0.12	-0.3
3,251,629	-		CCNA_03101	0.19	-0.7
3,251,716	-		CCNA_03101	0.29	+0.7
3,251,754	+		CCNA_03101	0.33	-0.1
3,251,945	-		CCNA_03101	0.54	-1.3
3,251,987	-		CCNA_03101	0.58	+0.4
3,252,029	+		CCNA_03101	0.63	+0.4
3,252,037	-		CCNA_03101	0.64	-1.5
3,252,037	-		CCNA_03101	0.64	-0.9
3,252,233	+		CCNA_03101	0.85	+0.6
3,252,269	+		CCNA_03101	0.89	+1.4
3,252,356	-				-0.2
3,252,367	-				-0.1
3,252,382	-				-0.0
3,252,392	-				+0.1
3,252,434	+				+0.8
3,252,442	-				-0.0
3,252,503	-				+0.7
3,252,514	+				-0.5
3,252,541	-		CCNA_03102	0.12	-0.2
3,252,619	-		CCNA_03102	0.17	+0.1
3,252,619	-		CCNA_03102	0.17	-0.1
3,252,652	-		CCNA_03102	0.19	+0.0
3,252,725	-		CCNA_03102	0.24	+0.4
3,252,728	+		CCNA_03102	0.24	-0.5
3,252,750	+		CCNA_03102	0.26	-1.4
3,252,792	-		CCNA_03102	0.29	+0.3
3,252,792	-		CCNA_03102	0.29	+1.7
3,252,817	+		CCNA_03102	0.30	+2.2
3,252,825	-		CCNA_03102	0.31	-0.3
3,252,825	-		CCNA_03102	0.31	-0.1
3,252,848	+		CCNA_03102	0.32	-0.2
3,252,861	-		CCNA_03102	0.33	+0.1
3,252,892	-		CCNA_03102	0.35	+0.0
3,252,944	+		CCNA_03102	0.39	-0.2
3,252,949	+		CCNA_03102	0.39	-0.5
3,252,949	+		CCNA_03102	0.39	-0.5
3,252,952	-		CCNA_03102	0.39	+0.3
3,252,952	-		CCNA_03102	0.39	+0.7
3,253,032	-		CCNA_03102	0.45	+0.7
3,253,032	-		CCNA_03102	0.45	-0.2
3,253,037	-		CCNA_03102	0.45	+0.3
3,253,099	+		CCNA_03102	0.49	-0.7
3,253,100	+		CCNA_03102	0.49	+0.1
3,253,224	-		CCNA_03102	0.58	+0.2
3,253,260	+		CCNA_03102	0.60	-0.2
3,253,260	+		CCNA_03102	0.60	+0.5
3,253,260	+		CCNA_03102	0.60	-0.6
3,253,268	-		CCNA_03102	0.61	-0.1
3,253,272	+		CCNA_03102	0.61	-0.5
3,253,272	+		CCNA_03102	0.61	-1.0
3,253,295	+		CCNA_03102	0.62	+0.4
3,253,303	-		CCNA_03102	0.63	-0.5
3,253,358	+		CCNA_03102	0.67	-0.6