Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03072

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,221,867	+		CCNA_03071	0.28	+0.2
3,221,875	-		CCNA_03071	0.29	-0.3
3,221,924	+		CCNA_03071	0.33	+0.7
3,221,932	-		CCNA_03071	0.33	-0.0
3,221,932	-		CCNA_03071	0.33	-2.6
3,221,944	+		CCNA_03071	0.34	+0.1
3,221,944	+		CCNA_03071	0.34	+1.2
3,221,944	+		CCNA_03071	0.34	-0.0
3,221,944	+		CCNA_03071	0.34	+0.3
3,221,944	+		CCNA_03071	0.34	-0.1
3,221,944	+		CCNA_03071	0.34	-0.5
3,221,952	-		CCNA_03071	0.35	+0.1
3,221,952	-		CCNA_03071	0.35	-0.0
3,221,952	-		CCNA_03071	0.35	-0.4
3,221,952	-		CCNA_03071	0.35	-0.5
3,221,952	-		CCNA_03071	0.35	-0.1
3,222,002	-		CCNA_03071	0.39	-2.8
3,222,006	+		CCNA_03071	0.39	-0.6
3,222,017	+		CCNA_03071	0.40	+0.8
3,222,019	+		CCNA_03071	0.40	-0.3
3,222,023	+		CCNA_03071	0.41	-0.1
3,222,041	-		CCNA_03071	0.42	+0.0
3,222,079	+		CCNA_03071	0.45	-0.6
3,222,087	-		CCNA_03071	0.46	-1.5
3,222,094	+		CCNA_03071	0.46	+0.1
3,222,102	-		CCNA_03071	0.47	-0.5
3,222,102	-		CCNA_03071	0.47	-0.7
3,222,122	-		CCNA_03071	0.48	+1.1
3,222,153	+		CCNA_03071	0.51	-0.3
3,222,161	-		CCNA_03071	0.51	-0.5
3,222,161	-		CCNA_03071	0.51	-0.4
3,222,161	-		CCNA_03071	0.51	-1.0
3,222,201	+		CCNA_03071	0.55	+0.7
3,222,216	+		CCNA_03071	0.56	+0.1
3,222,216	+		CCNA_03071	0.56	+0.5
3,222,218	+		CCNA_03071	0.56	+1.1
3,222,228	+		CCNA_03071	0.57	-0.9
3,222,228	+		CCNA_03071	0.57	+0.4
3,222,228	+		CCNA_03071	0.57	-0.2
3,222,236	-		CCNA_03071	0.57	-0.6
3,222,244	-		CCNA_03071	0.58	-0.2
3,222,327	+		CCNA_03071	0.64	+0.6
3,222,327	+		CCNA_03071	0.64	-0.3
3,222,327	+		CCNA_03071	0.64	+2.2
3,222,335	-		CCNA_03071	0.65	-0.5
3,222,380	+		CCNA_03071	0.69	-0.4
3,222,380	-		CCNA_03071	0.69	-0.0
3,222,408	+		CCNA_03071	0.71	-0.2
3,222,436	-		CCNA_03071	0.73	-2.5
3,222,441	-		CCNA_03071	0.73	-0.8
3,222,471	+		CCNA_03071	0.76	-1.4
3,222,472	+		CCNA_03071	0.76	-2.9
3,222,477	+		CCNA_03071	0.76	-0.6
3,222,479	-		CCNA_03071	0.76	+1.1
3,222,495	-		CCNA_03071	0.78	+2.0
3,222,504	-		CCNA_03071	0.78	-0.6
3,222,521	-		CCNA_03071	0.80	-2.5
3,222,523	+		CCNA_03071	0.80	-1.4
3,222,585	-		CCNA_03071	0.85	-0.4
3,222,603	+		CCNA_03071	0.86	-1.7
3,222,603	+		CCNA_03071	0.86	-2.3
3,222,620	-		CCNA_03071	0.87	-0.0
3,222,639	+		CCNA_03071	0.89	-0.7
3,222,742	+				+0.7
3,222,754	+				-1.2
3,222,762	-				-0.8
3,222,770	+				-0.3
3,222,770	+				-0.5
3,222,778	-				-0.4
3,222,778	-				-0.2
3,222,778	-				+0.0
3,222,783	+				-0.6
3,222,790	+				-2.6
3,222,790	-				-0.5
3,222,800	-				-0.5
3,222,814	-				+1.3
3,222,835	+				+0.7
3,222,866	+				+0.1
3,222,906	+				-0.8
3,223,182	+		CCNA_03072	0.46	+0.4
3,223,214	-		CCNA_03072	0.50	-1.2
3,223,259	+		CCNA_03072	0.57	-1.9
3,223,414	+		CCNA_03072	0.79	-0.3
3,223,422	-		CCNA_03072	0.80	+0.1
3,223,513	+				+0.6
3,223,513	+				+0.7
3,223,518	+				-2.0
3,223,521	-				+0.2
3,223,521	-				-0.4
3,223,523	-				-0.9
3,223,528	+				+0.1
3,223,536	-				+0.4
3,223,545	-				-0.5
3,223,566	-				-1.7
3,223,578	+				-0.0
3,223,578	+				-1.6
3,223,578	+				-0.3
3,223,586	-				+0.1
3,223,586	-				+0.1
3,223,586	-				+0.6
3,223,586	-				-1.0
3,223,647	-				-1.2
3,223,660	+				+0.3
3,223,682	+				-1.6
3,223,734	+		CCNA_03073	0.18	+0.5
3,223,734	+		CCNA_03073	0.18	-0.6
3,223,734	+		CCNA_03073	0.18	-0.5
3,223,739	+		CCNA_03073	0.18	-1.1
3,223,742	-		CCNA_03073	0.19	-1.1
3,223,742	-		CCNA_03073	0.19	-0.4
3,223,742	-		CCNA_03073	0.19	-0.0
3,223,749	-		CCNA_03073	0.20	+0.6
3,223,799	-		CCNA_03073	0.30	-0.6
3,223,834	-		CCNA_03073	0.37	-0.6
3,223,848	-		CCNA_03073	0.39	-0.4
3,223,855	+		CCNA_03073	0.41	+1.0
3,223,898	-		CCNA_03073	0.49	-1.3
3,223,912	+		CCNA_03073	0.51	-0.3
3,223,916	+		CCNA_03073	0.52	-0.2
3,224,020	+		CCNA_03073	0.72	+0.7
3,224,066	+		CCNA_03073	0.81	-0.3
3,224,084	+		CCNA_03073	0.84	-0.1
3,224,084	-		CCNA_03073	0.84	-0.6
3,224,129	+				+0.5
3,224,131	+				+0.0
3,224,131	+				+0.7
3,224,148	+				-1.2
3,224,155	+				-0.9
3,224,160	+				-1.7
3,224,269	-		CCNA_03074	0.14	-0.9
3,224,293	+		CCNA_03074	0.18	-0.8
3,224,301	-		CCNA_03074	0.19	+0.5
3,224,313	+		CCNA_03074	0.20	-0.2
3,224,315	+		CCNA_03074	0.21	-2.0
3,224,323	+		CCNA_03074	0.22	-0.5
3,224,354	-		CCNA_03074	0.26	+0.1
3,224,407	+		CCNA_03074	0.33	+0.5
3,224,425	+		CCNA_03074	0.36	-1.1
3,224,425	+		CCNA_03074	0.36	-0.4
3,224,506	+		CCNA_03074	0.47	+1.4
3,224,543	+		CCNA_03074	0.52	-0.7
3,224,545	+		CCNA_03074	0.52	-0.9
3,224,551	-		CCNA_03074	0.53	-0.1
3,224,551	-		CCNA_03074	0.53	+0.7
3,224,551	-		CCNA_03074	0.53	+0.6
3,224,551	-		CCNA_03074	0.53	-0.7
3,224,558	-		CCNA_03074	0.54	-0.1
3,224,563	-		CCNA_03074	0.55	+1.1