Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03026

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,179,785	+		CCNA_03024	0.54	-1.2
3,179,785	+		CCNA_03024	0.54	-0.4
3,179,785	+		CCNA_03024	0.54	-0.1
3,179,785	+		CCNA_03024	0.54	-0.7
3,179,793	-		CCNA_03024	0.55	-0.5
3,179,793	-		CCNA_03024	0.55	-0.3
3,179,793	-		CCNA_03024	0.55	-0.7
3,179,804	+		CCNA_03024	0.56	-1.3
3,179,831	-		CCNA_03024	0.59	+0.5
3,179,846	-		CCNA_03024	0.60	-0.0
3,179,856	-		CCNA_03024	0.62	+0.2
3,179,859	-		CCNA_03024	0.62	+1.4
3,179,918	+		CCNA_03024	0.69	-1.7
3,179,918	+		CCNA_03024	0.69	-0.6
3,179,918	+		CCNA_03024	0.69	-1.5
3,179,927	-		CCNA_03024	0.70	+0.7
3,179,936	-		CCNA_03024	0.71	-0.8
3,179,955	-		CCNA_03024	0.73	+0.1
3,179,970	-		CCNA_03024	0.74	+0.1
3,179,974	+		CCNA_03024	0.75	+0.9
3,179,974	+		CCNA_03024	0.75	+0.5
3,179,974	+		CCNA_03024	0.75	-1.2
3,179,974	+		CCNA_03024	0.75	-0.4
3,179,982	-		CCNA_03024	0.76	+0.2
3,179,982	-		CCNA_03024	0.76	+2.5
3,179,982	-		CCNA_03024	0.76	+0.8
3,180,005	-		CCNA_03024	0.78	+0.4
3,180,046	-		CCNA_03024	0.83	+0.3
3,180,078	-		CCNA_03024	0.87	-0.4
3,180,088	+		CCNA_03024	0.88	+0.4
3,180,093	+		CCNA_03024	0.88	-0.5
3,180,093	+		CCNA_03024	0.88	+0.8
3,180,093	+		CCNA_03024	0.88	-0.7
3,180,101	-		CCNA_03024	0.89	+1.6
3,180,119	-				+0.4
3,180,154	+				-1.2
3,180,167	-				-0.6
3,180,184	-				+0.4
3,180,200	+				-0.4
3,180,208	-				+0.1
3,180,208	-				+0.8
3,180,227	+				-1.1
3,180,235	-				+0.2
3,180,248	-				+0.4
3,180,309	+				-0.0
3,180,314	+				+1.2
3,180,335	+		CCNA_03025	0.11	+1.0
3,180,337	+		CCNA_03025	0.12	+0.5
3,180,338	-		CCNA_03025	0.12	-1.8
3,180,340	-		CCNA_03025	0.12	-2.0
3,180,368	+		CCNA_03025	0.18	-0.4
3,180,374	+		CCNA_03025	0.19	+0.4
3,180,382	-		CCNA_03025	0.21	-1.0
3,180,401	+		CCNA_03025	0.24	+1.1
3,180,401	+		CCNA_03025	0.24	+1.8
3,180,401	+		CCNA_03025	0.24	+1.8
3,180,401	+		CCNA_03025	0.24	-0.2
3,180,409	-		CCNA_03025	0.26	-1.0
3,180,416	+		CCNA_03025	0.27	+0.1
3,180,417	+		CCNA_03025	0.27	-0.2
3,180,424	-		CCNA_03025	0.29	+0.1
3,180,439	-		CCNA_03025	0.32	+0.0
3,180,444	-		CCNA_03025	0.33	-1.7
3,180,482	+		CCNA_03025	0.40	+0.2
3,180,487	+		CCNA_03025	0.41	-0.4
3,180,490	-		CCNA_03025	0.42	-1.3
3,180,492	+		CCNA_03025	0.42	+0.8
3,180,492	+		CCNA_03025	0.42	-0.0
3,180,499	+		CCNA_03025	0.44	+0.7
3,180,500	-		CCNA_03025	0.44	+0.1
3,180,528	+		CCNA_03025	0.49	-0.5
3,180,536	-		CCNA_03025	0.51	-0.3
3,180,536	-		CCNA_03025	0.51	+0.7
3,180,579	-		CCNA_03025	0.59	+0.8
3,180,590	-		CCNA_03025	0.62	+0.4
3,180,603	+		CCNA_03025	0.64	-0.5
3,180,655	-		CCNA_03025	0.74	-0.1
3,180,678	-		CCNA_03025	0.79	+0.7
3,180,678	-		CCNA_03025	0.79	-0.1
3,180,678	-		CCNA_03025	0.79	+1.7
3,180,785	+				+0.7
3,180,785	+				+0.4
3,180,785	+				+0.7
3,180,785	+				-1.1
3,180,793	-				+0.2
3,180,795	-				+0.9
3,180,849	+				-1.1
3,180,849	+				-2.1
3,180,859	+		CCNA_03026	0.11	+1.2
3,180,921	+		CCNA_03026	0.20	+0.7
3,180,921	+		CCNA_03026	0.20	-0.7
3,180,928	+		CCNA_03026	0.21	+1.7
3,180,928	+		CCNA_03026	0.21	-0.9
3,180,929	-		CCNA_03026	0.21	-1.3
3,180,954	+		CCNA_03026	0.25	-0.6
3,180,957	-		CCNA_03026	0.25	-0.4
3,181,081	+		CCNA_03026	0.43	+0.7
3,181,081	+		CCNA_03026	0.43	-0.1
3,181,151	+		CCNA_03026	0.53	-1.0
3,181,156	+		CCNA_03026	0.53	+0.3
3,181,156	+		CCNA_03026	0.53	+0.4
3,181,159	-		CCNA_03026	0.54	+0.7
3,181,195	-		CCNA_03026	0.59	-2.9
3,181,195	-		CCNA_03026	0.59	-0.7
3,181,202	+		CCNA_03026	0.60	-0.3
3,181,202	+		CCNA_03026	0.60	-0.3
3,181,203	-		CCNA_03026	0.60	+0.4
3,181,242	+		CCNA_03026	0.66	-1.0
3,181,242	+		CCNA_03026	0.66	+0.4
3,181,251	+		CCNA_03026	0.67	+0.2
3,181,339	-		CCNA_03026	0.79	-0.9
3,181,339	-		CCNA_03026	0.79	+0.4
3,181,339	-		CCNA_03026	0.79	-0.8
3,181,379	+		CCNA_03026	0.85	+0.6
3,181,415	-				-0.1
3,181,498	+				+0.3
3,181,550	-				+1.1
3,181,627	-				-0.1
3,181,635	+				-0.2
3,181,635	+				-0.2
3,181,635	+				-0.0
3,181,635	+				+0.6
3,181,656	-				+1.2
3,181,675	+				+0.1
3,181,756	+				-0.0
3,181,780	-		CCNA_03027	0.10	+1.2
3,181,791	-		CCNA_03027	0.11	+0.8
3,181,795	-		CCNA_03027	0.11	-0.1
3,181,806	+		CCNA_03027	0.12	-0.3
3,181,841	-		CCNA_03027	0.15	-0.4
3,181,843	+		CCNA_03027	0.15	-0.1
3,181,843	+		CCNA_03027	0.15	+1.1
3,181,843	+		CCNA_03027	0.15	+0.1
3,181,855	-		CCNA_03027	0.16	+0.1
3,181,856	-		CCNA_03027	0.16	+0.2
3,181,863	+		CCNA_03027	0.16	+0.6
3,181,899	+		CCNA_03027	0.19	+0.5
3,181,907	-		CCNA_03027	0.20	+0.1
3,181,955	-		CCNA_03027	0.23	-1.6
3,181,966	-		CCNA_03027	0.24	-0.4
3,181,966	-		CCNA_03027	0.24	+1.7
3,181,981	+		CCNA_03027	0.25	-0.7
3,181,981	+		CCNA_03027	0.25	+0.8
3,181,981	+		CCNA_03027	0.25	+0.7
3,181,981	+		CCNA_03027	0.25	+0.4
3,181,981	+		CCNA_03027	0.25	-0.0
3,181,981	+		CCNA_03027	0.25	-1.1
3,181,981	+		CCNA_03027	0.25	+0.1
3,181,981	+		CCNA_03027	0.25	-0.3
3,181,981	+		CCNA_03027	0.25	+0.3
3,181,981	+		CCNA_03027	0.25	-0.4
3,181,981	+		CCNA_03027	0.25	-0.3
3,181,981	+		CCNA_03027	0.25	+0.4
3,181,981	+		CCNA_03027	0.25	-0.7
3,181,982	-		CCNA_03027	0.25	+0.2
3,181,989	-		CCNA_03027	0.26	+1.8
3,181,989	-		CCNA_03027	0.26	-0.8
3,181,989	-		CCNA_03027	0.26	+1.8
3,181,989	-		CCNA_03027	0.26	-1.0
3,181,989	-		CCNA_03027	0.26	+0.3
3,181,989	-		CCNA_03027	0.26	+0.3
3,182,025	-		CCNA_03027	0.28	+0.1
3,182,031	+		CCNA_03027	0.29	+0.3
3,182,039	-		CCNA_03027	0.29	+0.2
3,182,039	-		CCNA_03027	0.29	+0.7
3,182,098	+		CCNA_03027	0.34	+0.5
3,182,098	+		CCNA_03027	0.34	+0.9
3,182,103	+		CCNA_03027	0.34	+0.0
3,182,103	+		CCNA_03027	0.34	-0.3
3,182,103	-		CCNA_03027	0.34	-0.2
3,182,105	+		CCNA_03027	0.34	-0.3
3,182,105	+		CCNA_03027	0.34	-1.2
3,182,134	+		CCNA_03027	0.37	+0.3
3,182,142	-		CCNA_03027	0.37	+0.4
3,182,142	-		CCNA_03027	0.37	-1.2
3,182,147	+		CCNA_03027	0.38	+1.5
3,182,155	-		CCNA_03027	0.38	-0.6
3,182,188	+		CCNA_03027	0.41	+0.1
3,182,226	-		CCNA_03027	0.43	+0.3
3,182,317	+		CCNA_03027	0.50	+0.7
3,182,317	+		CCNA_03027	0.50	+0.5
3,182,317	+		CCNA_03027	0.50	+1.6
3,182,317	+		CCNA_03027	0.50	+0.1
3,182,317	+		CCNA_03027	0.50	+2.3
3,182,325	-		CCNA_03027	0.51	+0.1
3,182,333	+		CCNA_03027	0.51	-2.0
3,182,367	+		CCNA_03027	0.54	-0.1
3,182,393	+		CCNA_03027	0.56	-0.2
3,182,393	+		CCNA_03027	0.56	+1.5
3,182,393	+		CCNA_03027	0.56	+0.4
3,182,393	+		CCNA_03027	0.56	+0.4
3,182,401	-		CCNA_03027	0.57	+0.0
3,182,401	-		CCNA_03027	0.57	+0.6
3,182,401	-		CCNA_03027	0.57	+1.0
3,182,401	-		CCNA_03027	0.57	+0.7
3,182,401	-		CCNA_03027	0.57	+0.4
3,182,401	-		CCNA_03027	0.57	-0.6
3,182,401	-		CCNA_03027	0.57	+1.0
3,182,410	+		CCNA_03027	0.57	-0.2
3,182,418	-		CCNA_03027	0.58	+0.0
3,182,436	+		CCNA_03027	0.59	+0.2
3,182,442	+		CCNA_03027	0.60	+1.3
3,182,443	+		CCNA_03027	0.60	+0.4
3,182,443	+		CCNA_03027	0.60	+0.2
3,182,460	+		CCNA_03027	0.61	+0.5
3,182,475	-		CCNA_03027	0.62	-1.1