Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02975

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,128,422	+		CCNA_02972	0.47	+0.2
3,128,473	+		CCNA_02972	0.55	-1.1
3,128,478	+		CCNA_02972	0.56	-0.6
3,128,481	-		CCNA_02972	0.57	-1.2
3,128,494	-		CCNA_02972	0.59	+0.3
3,128,531	-		CCNA_02972	0.65	-0.7
3,128,531	-		CCNA_02972	0.65	-0.6
3,128,554	+		CCNA_02972	0.68	-0.8
3,128,597	+		CCNA_02972	0.75	-0.5
3,128,603	+		CCNA_02972	0.76	-0.4
3,128,609	+		CCNA_02972	0.77	-0.3
3,128,610	+		CCNA_02972	0.77	-0.3
3,128,610	+		CCNA_02972	0.77	-0.3
3,128,610	+		CCNA_02972	0.77	-0.3
3,128,610	+		CCNA_02972	0.77	-0.1
3,128,610	+		CCNA_02972	0.77	+0.2
3,128,615	+		CCNA_02972	0.78	-0.9
3,128,618	-		CCNA_02972	0.79	+0.1
3,128,618	-		CCNA_02972	0.79	-0.7
3,128,618	-		CCNA_02972	0.79	+0.2
3,128,625	+		CCNA_02972	0.80	+0.6
3,128,625	+		CCNA_02972	0.80	+1.3
3,128,635	+		CCNA_02972	0.81	-0.0
3,128,663	-		CCNA_02972	0.86	-0.0
3,128,722	+				+0.2
3,128,763	+				+0.6
3,128,763	-				-0.0
3,128,767	-				+0.1
3,128,797	+				+0.9
3,128,810	-				-1.5
3,128,814	+				+0.9
3,128,850	+		CCNA_02973	0.13	+0.2
3,128,858	-		CCNA_02973	0.16	+0.8
3,128,860	-		CCNA_02973	0.17	-1.1
3,128,886	-		CCNA_02973	0.26	-0.0
3,128,930	+		CCNA_02973	0.41	-1.1
3,128,930	+		CCNA_02973	0.41	+0.1
3,128,931	+		CCNA_02973	0.41	-0.8
3,128,931	+		CCNA_02973	0.41	-0.5
3,128,931	+		CCNA_02973	0.41	-0.3
3,128,938	-		CCNA_02973	0.44	-0.7
3,128,938	-		CCNA_02973	0.44	+0.2
3,128,939	-		CCNA_02973	0.44	-0.2
3,128,939	-		CCNA_02973	0.44	-0.0
3,128,944	-		CCNA_02973	0.46	-1.6
3,128,962	+		CCNA_02973	0.52	-0.5
3,128,970	-		CCNA_02973	0.55	+0.1
3,128,978	-		CCNA_02973	0.57	-2.8
3,129,091	-				-0.2
3,129,134	+		CCNA_02974	0.13	-0.7
3,129,158	+		CCNA_02974	0.22	-0.4
3,129,158	+		CCNA_02974	0.22	-0.2
3,129,198	+		CCNA_02974	0.36	-1.3
3,129,198	+		CCNA_02974	0.36	-0.9
3,129,198	+		CCNA_02974	0.36	-0.9
3,129,198	+		CCNA_02974	0.36	-0.7
3,129,198	+		CCNA_02974	0.36	-0.3
3,129,198	+		CCNA_02974	0.36	-0.5
3,129,198	+		CCNA_02974	0.36	-1.5
3,129,198	+		CCNA_02974	0.36	-0.6
3,129,198	+		CCNA_02974	0.36	+0.0
3,129,198	+		CCNA_02974	0.36	-0.7
3,129,200	-		CCNA_02974	0.37	+0.1
3,129,203	+		CCNA_02974	0.38	-0.1
3,129,203	+		CCNA_02974	0.38	-0.7
3,129,203	+		CCNA_02974	0.38	-2.0
3,129,206	-		CCNA_02974	0.39	+0.5
3,129,206	-		CCNA_02974	0.39	+0.6
3,129,206	-		CCNA_02974	0.39	-1.0
3,129,206	-		CCNA_02974	0.39	+0.8
3,129,211	-		CCNA_02974	0.41	-0.2
3,129,211	-		CCNA_02974	0.41	+0.9
3,129,211	-		CCNA_02974	0.41	+1.1
3,129,211	-		CCNA_02974	0.41	-2.1
3,129,211	-		CCNA_02974	0.41	-0.3
3,129,211	-		CCNA_02974	0.41	+0.0
3,129,211	-		CCNA_02974	0.41	-0.4
3,129,213	+		CCNA_02974	0.41	-1.5
3,129,216	-		CCNA_02974	0.42	-0.3
3,129,221	-		CCNA_02974	0.44	-0.8
3,129,230	-		CCNA_02974	0.47	-1.0
3,129,230	-		CCNA_02974	0.47	-0.3
3,129,235	-		CCNA_02974	0.49	-0.9
3,129,305	+		CCNA_02974	0.74	+0.3
3,129,306	-		CCNA_02974	0.75	+0.5
3,129,306	-		CCNA_02974	0.75	-0.3
3,129,306	-		CCNA_02974	0.75	+0.4
3,129,308	-		CCNA_02974	0.75	+1.4
3,129,308	-		CCNA_02974	0.75	-1.1
3,129,319	+		CCNA_02974	0.79	-0.9
3,129,343	-		CCNA_02974	0.88	+0.1
3,129,350	+				+0.0
3,129,360	+				-0.6
3,129,360	+				+0.1
3,129,360	+				-1.9
3,129,360	+				-0.0
3,129,360	+				-1.0
3,129,360	+				-1.2
3,129,360	+				-0.5
3,129,368	-				-0.0
3,129,368	-				-0.4
3,129,368	-				+1.1
3,129,368	-				-1.0
3,129,368	-				-0.7
3,129,368	-				+0.2
3,129,368	-				-0.4
3,129,368	-				+1.5
3,129,368	-				-0.2
3,129,368	-				-0.1
3,129,368	-				+0.7
3,129,388	-				+0.6
3,129,398	-				-0.5
3,129,442	+				+0.2
3,129,455	+				-0.4
3,129,462	+				+0.0
3,129,465	-				-0.7
3,129,470	-				+0.3
3,129,488	-				+1.3
3,129,494	-				-0.2
3,129,507	-				-0.7
3,129,583	-				+0.2
3,129,601	+		CCNA_02975	0.10	-1.2
3,129,601	+		CCNA_02975	0.10	+0.9
3,129,609	-		CCNA_02975	0.11	-0.6
3,129,609	-		CCNA_02975	0.11	+0.8
3,129,610	-		CCNA_02975	0.11	-0.3
3,129,666	-		CCNA_02975	0.14	+0.2
3,129,712	-		CCNA_02975	0.16	+0.2
3,129,731	-		CCNA_02975	0.17	-1.3
3,129,734	+		CCNA_02975	0.17	-0.1
3,129,815	-		CCNA_02975	0.21	-1.2
3,129,835	+		CCNA_02975	0.22	-0.5
3,129,856	-		CCNA_02975	0.23	-0.7
3,129,875	-		CCNA_02975	0.24	-0.6
3,129,888	+		CCNA_02975	0.25	+0.2
3,129,889	+		CCNA_02975	0.25	+0.4
3,129,925	+		CCNA_02975	0.27	+0.3
3,129,937	+		CCNA_02975	0.28	-0.0
3,129,937	+		CCNA_02975	0.28	-0.5
3,129,957	+		CCNA_02975	0.29	-0.4
3,129,969	+		CCNA_02975	0.29	-0.2
3,129,977	-		CCNA_02975	0.30	+1.1
3,129,989	-		CCNA_02975	0.30	+0.2
3,129,991	+		CCNA_02975	0.30	+0.0
3,129,993	+		CCNA_02975	0.31	+0.5
3,129,998	+		CCNA_02975	0.31	-0.6
3,130,001	-		CCNA_02975	0.31	-0.2
3,130,033	+		CCNA_02975	0.33	+0.4
3,130,044	+		CCNA_02975	0.33	-0.4
3,130,052	-		CCNA_02975	0.34	-1.1
3,130,078	+		CCNA_02975	0.35	+0.3
3,130,078	+		CCNA_02975	0.35	+0.9
3,130,078	+		CCNA_02975	0.35	-0.4
3,130,078	+		CCNA_02975	0.35	-0.2
3,130,086	-		CCNA_02975	0.35	+1.1
3,130,092	+		CCNA_02975	0.36	+1.5
3,130,182	-		CCNA_02975	0.40	-0.4
3,130,189	+		CCNA_02975	0.41	+0.1
3,130,197	-		CCNA_02975	0.41	-0.0
3,130,257	-		CCNA_02975	0.44	+0.6
3,130,257	-		CCNA_02975	0.44	+2.2
3,130,257	-		CCNA_02975	0.44	-0.0
3,130,261	+		CCNA_02975	0.44	+0.6
3,130,290	+		CCNA_02975	0.46	-0.2
3,130,293	-		CCNA_02975	0.46	-1.1
3,130,293	-		CCNA_02975	0.46	-0.7
3,130,298	-		CCNA_02975	0.46	-0.0
3,130,374	+		CCNA_02975	0.50	+1.0
3,130,382	-		CCNA_02975	0.51	-0.1
3,130,398	+		CCNA_02975	0.52	+0.8
3,130,398	+		CCNA_02975	0.52	+0.3
3,130,398	+		CCNA_02975	0.52	+0.1
3,130,398	+		CCNA_02975	0.52	-0.2
3,130,398	+		CCNA_02975	0.52	+1.8
3,130,406	-		CCNA_02975	0.52	-0.2
3,130,406	-		CCNA_02975	0.52	-0.8
3,130,437	-		CCNA_02975	0.54	+0.2
3,130,467	+		CCNA_02975	0.55	-0.2
3,130,467	+		CCNA_02975	0.55	-0.1
3,130,488	-		CCNA_02975	0.56	-0.4
3,130,501	+		CCNA_02975	0.57	+2.1
3,130,560	-		CCNA_02975	0.60	+1.8
3,130,581	-		CCNA_02975	0.61	-0.4
3,130,581	-		CCNA_02975	0.61	+0.5
3,130,603	+		CCNA_02975	0.62	+1.4
3,130,603	+		CCNA_02975	0.62	-0.2
3,130,611	-		CCNA_02975	0.63	-0.7
3,130,611	-		CCNA_02975	0.63	-0.6
3,130,630	+		CCNA_02975	0.64	-0.1
3,130,637	+		CCNA_02975	0.64	-1.3
3,130,644	-		CCNA_02975	0.64	+1.3
3,130,672	+		CCNA_02975	0.66	-0.8
3,130,672	+		CCNA_02975	0.66	+2.1
3,130,728	-		CCNA_02975	0.69	+0.2
3,130,750	+		CCNA_02975	0.70	-0.7
3,130,758	-		CCNA_02975	0.70	+0.4
3,130,776	-		CCNA_02975	0.71	+0.2
3,130,790	+		CCNA_02975	0.72	+1.8
3,130,817	+		CCNA_02975	0.73	-0.2
3,130,822	+		CCNA_02975	0.74	-0.3
3,130,822	+		CCNA_02975	0.74	-0.4
3,130,856	+		CCNA_02975	0.75	+0.6
3,130,992	-		CCNA_02975	0.82	+1.4
3,130,998	-		CCNA_02975	0.83	+0.0
3,131,011	-		CCNA_02975	0.83	+0.2
3,131,042	+		CCNA_02975	0.85	-0.4
3,131,170	-				+0.2
3,131,172	+				-0.7
3,131,233	+				+0.6
3,131,251	+				+0.8
3,131,270	-				+0.2
3,131,276	+				+0.7
3,131,276	+				-0.5
3,131,286	+				+0.3
3,131,286	+				-0.2
3,131,294	-				-0.1
3,131,294	-				-0.1
3,131,322	+				+0.5
3,131,322	+				+0.1
3,131,324	+				-0.3
3,131,330	-				-0.1
3,131,331	-				+0.3
3,131,332	-				-0.1
3,131,369	+				-0.5
3,131,379	+				+0.2
3,131,391	+				+1.4
3,131,415	+				-0.1
3,131,471	-				+0.4
3,131,477	+				-0.5
3,131,484	-				+0.3
3,131,509	-				+0.4
3,131,542	-		CCNA_02976	0.17	+0.2
3,131,553	-		CCNA_02976	0.21	+0.3
3,131,553	-		CCNA_02976	0.21	-0.1
3,131,566	-		CCNA_02976	0.24	+0.5
3,131,597	+		CCNA_02976	0.33	-1.3
3,131,659	+		CCNA_02976	0.50	-1.1
3,131,667	-		CCNA_02976	0.52	+0.1
3,131,809	+				+0.1
3,131,809	+				-0.2
3,131,817	-				+0.3
3,131,817	-				+0.5
3,131,817	-				+0.2
3,131,817	-				+0.7
3,131,817	-				+0.2
3,131,847	-				+0.2
3,131,952	+				+0.7
3,131,952	+				-0.5
3,131,998	-				+1.8
3,132,043	-				+1.1
3,132,075	+				+0.2
3,132,088	-				+0.8
3,132,120	-		CCNA_02977	0.10	-0.4
3,132,127	-		CCNA_02977	0.11	-1.2
3,132,141	+		CCNA_02977	0.14	+0.2
3,132,151	-		CCNA_02977	0.15	-0.2
3,132,189	+		CCNA_02977	0.22	-0.5
3,132,194	+		CCNA_02977	0.23	-0.1
3,132,194	+		CCNA_02977	0.23	-0.4
3,132,201	-		CCNA_02977	0.24	-1.5
3,132,233	+		CCNA_02977	0.30	+0.9
3,132,239	+		CCNA_02977	0.31	+0.2
3,132,240	+		CCNA_02977	0.31	+0.8
3,132,247	-		CCNA_02977	0.32	-0.5
3,132,258	-		CCNA_02977	0.34	-0.2
3,132,269	+		CCNA_02977	0.36	-0.6
3,132,269	+		CCNA_02977	0.36	-0.2
3,132,274	+		CCNA_02977	0.37	+0.5