Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02645

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02643 and CCNA_02644 overlap by 4 nucleotidesCCNA_02644 and CCNA_02645 overlap by 4 nucleotidesCCNA_02645 and CCNA_02646 overlap by 4 nucleotides CCNA_02643: CCNA_02643 - penicillin-binding protein FtsI, at 2,796,353 to 2,798,122 _02643 CCNA_02644: CCNA_02644 - cell division protein FtsL, at 2,798,119 to 2,798,562 _02644 CCNA_02645: CCNA_02645 - S-adenosyl-methyltransferase MraW, at 2,798,559 to 2,799,494 _02645 CCNA_02646: CCNA_02646 - cell division protein MraZ, at 2,799,491 to 2,799,961 _02646 Position (kb) 2798 2799 2800Strain fitness (log2 ratio) -1 0 1at 2798.130 kb on - strandat 2798.198 kb on + strand, within CCNA_02644at 2798.231 kb on + strand, within CCNA_02644at 2798.239 kb on - strand, within CCNA_02644at 2798.239 kb on - strand, within CCNA_02644at 2798.239 kb on - strand, within CCNA_02644at 2798.580 kb on - strandat 2798.715 kb on - strand, within CCNA_02645at 2798.810 kb on + strand, within CCNA_02645at 2798.928 kb on - strand, within CCNA_02645at 2799.078 kb on - strand, within CCNA_02645at 2799.093 kb on - strand, within CCNA_02645at 2799.105 kb on - strand, within CCNA_02645at 2799.477 kb on - strandat 2799.504 kb on + strandat 2799.534 kb on - strandat 2799.702 kb on + strand, within CCNA_02646at 2799.707 kb on - strand, within CCNA_02646at 2799.707 kb on - strand, within CCNA_02646at 2799.789 kb on - strand, within CCNA_02646at 2799.834 kb on - strand, within CCNA_02646at 2799.842 kb on - strand, within CCNA_02646at 2799.966 kb on + strandat 2799.966 kb on + strandat 2799.973 kb on - strandat 2800.221 kb on + strandat 2800.244 kb on + strandat 2800.318 kb on + strandat 2800.326 kb on - strandat 2800.326 kb on - strandat 2800.326 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with Dimethyl Sulfoxide 0.4 %
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2,798,130 - +0.7
2,798,198 + CCNA_02644 0.18 -1.0
2,798,231 + CCNA_02644 0.25 +0.2
2,798,239 - CCNA_02644 0.27 +0.4
2,798,239 - CCNA_02644 0.27 +1.1
2,798,239 - CCNA_02644 0.27 +0.7
2,798,580 - -0.1
2,798,715 - CCNA_02645 0.17 +0.4
2,798,810 + CCNA_02645 0.27 +0.5
2,798,928 - CCNA_02645 0.39 +0.1
2,799,078 - CCNA_02645 0.55 -0.2
2,799,093 - CCNA_02645 0.57 -0.8
2,799,105 - CCNA_02645 0.58 +0.5
2,799,477 - +0.5
2,799,504 + -1.2
2,799,534 - +0.8
2,799,702 + CCNA_02646 0.45 -0.4
2,799,707 - CCNA_02646 0.46 +0.0
2,799,707 - CCNA_02646 0.46 +0.5
2,799,789 - CCNA_02646 0.63 +0.5
2,799,834 - CCNA_02646 0.73 +0.2
2,799,842 - CCNA_02646 0.75 -0.5
2,799,966 + -0.1
2,799,966 + -0.6
2,799,973 - +0.1
2,800,221 + -1.4
2,800,244 + -0.4
2,800,318 + +0.2
2,800,326 - +0.5
2,800,326 - +0.7
2,800,326 - +0.4

Or see this region's nucleotide sequence