Experiment: PYE with Dimethyl Sulfoxide 0.4 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02633 and CCNA_02634 are separated by 85 nucleotides CCNA_02634 and CCNA_02635 overlap by 1 nucleotides
CCNA_02633: CCNA_02633 - membrane-bound glycosyl hydrolase, at 2,782,798 to 2,785,158
_02633
CCNA_02634: CCNA_02634 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase, at 2,785,244 to 2,786,329
_02634
CCNA_02635: CCNA_02635 - cell division protein FtsW, at 2,786,329 to 2,787,501
_02635
Position (kb)
2785
2786
2787 Strain fitness (log2 ratio)
-1
0
1 at 2784.247 kb on - strand, within CCNA_02633 at 2784.253 kb on - strand, within CCNA_02633 at 2784.279 kb on - strand, within CCNA_02633 at 2784.310 kb on + strand, within CCNA_02633 at 2784.310 kb on + strand, within CCNA_02633 at 2784.310 kb on + strand, within CCNA_02633 at 2784.319 kb on - strand, within CCNA_02633 at 2784.333 kb on + strand, within CCNA_02633 at 2784.333 kb on + strand, within CCNA_02633 at 2784.387 kb on + strand, within CCNA_02633 at 2784.395 kb on - strand, within CCNA_02633 at 2784.424 kb on + strand, within CCNA_02633 at 2784.442 kb on + strand, within CCNA_02633 at 2784.443 kb on + strand, within CCNA_02633 at 2784.451 kb on - strand, within CCNA_02633 at 2784.468 kb on + strand, within CCNA_02633 at 2784.475 kb on - strand, within CCNA_02633 at 2784.499 kb on + strand, within CCNA_02633 at 2784.506 kb on + strand, within CCNA_02633 at 2784.506 kb on - strand, within CCNA_02633 at 2784.545 kb on + strand, within CCNA_02633 at 2784.560 kb on + strand, within CCNA_02633 at 2784.573 kb on + strand, within CCNA_02633 at 2784.578 kb on + strand, within CCNA_02633 at 2784.698 kb on - strand, within CCNA_02633 at 2784.709 kb on + strand, within CCNA_02633 at 2784.711 kb on - strand, within CCNA_02633 at 2784.715 kb on + strand, within CCNA_02633 at 2784.760 kb on - strand, within CCNA_02633 at 2784.760 kb on - strand, within CCNA_02633 at 2784.760 kb on - strand, within CCNA_02633 at 2784.760 kb on - strand, within CCNA_02633 at 2784.765 kb on - strand, within CCNA_02633 at 2784.796 kb on - strand, within CCNA_02633 at 2784.815 kb on + strand, within CCNA_02633 at 2784.831 kb on + strand, within CCNA_02633 at 2784.847 kb on + strand, within CCNA_02633 at 2784.855 kb on - strand, within CCNA_02633 at 2784.855 kb on - strand, within CCNA_02633 at 2784.855 kb on - strand, within CCNA_02633 at 2784.880 kb on - strand, within CCNA_02633 at 2784.901 kb on - strand, within CCNA_02633 at 2784.911 kb on - strand, within CCNA_02633 at 2784.962 kb on + strand at 2784.970 kb on - strand at 2784.970 kb on - strand at 2784.994 kb on - strand at 2785.087 kb on - strand at 2785.126 kb on + strand at 2785.215 kb on + strand at 2785.215 kb on + strand at 2785.223 kb on - strand at 2785.223 kb on - strand at 2785.223 kb on - strand at 2785.223 kb on - strand at 2785.236 kb on - strand at 2785.242 kb on + strand at 2786.375 kb on - strand at 2786.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction PYE with Dimethyl Sulfoxide 0.4 % remove 2,784,247 - CCNA_02633 0.61 +0.1 2,784,253 - CCNA_02633 0.62 -0.3 2,784,279 - CCNA_02633 0.63 -0.6 2,784,310 + CCNA_02633 0.64 -0.3 2,784,310 + CCNA_02633 0.64 +1.0 2,784,310 + CCNA_02633 0.64 +1.4 2,784,319 - CCNA_02633 0.64 -0.5 2,784,333 + CCNA_02633 0.65 -1.3 2,784,333 + CCNA_02633 0.65 -0.0 2,784,387 + CCNA_02633 0.67 -1.2 2,784,395 - CCNA_02633 0.68 +0.4 2,784,424 + CCNA_02633 0.69 -1.1 2,784,442 + CCNA_02633 0.70 +0.1 2,784,443 + CCNA_02633 0.70 -1.6 2,784,451 - CCNA_02633 0.70 -0.3 2,784,468 + CCNA_02633 0.71 -0.8 2,784,475 - CCNA_02633 0.71 -0.5 2,784,499 + CCNA_02633 0.72 -0.7 2,784,506 + CCNA_02633 0.72 +0.5 2,784,506 - CCNA_02633 0.72 -0.8 2,784,545 + CCNA_02633 0.74 -1.3 2,784,560 + CCNA_02633 0.75 -0.6 2,784,573 + CCNA_02633 0.75 +0.2 2,784,578 + CCNA_02633 0.75 -1.7 2,784,698 - CCNA_02633 0.80 -0.2 2,784,709 + CCNA_02633 0.81 -0.4 2,784,711 - CCNA_02633 0.81 -0.8 2,784,715 + CCNA_02633 0.81 -1.5 2,784,760 - CCNA_02633 0.83 -0.2 2,784,760 - CCNA_02633 0.83 -0.4 2,784,760 - CCNA_02633 0.83 +0.6 2,784,760 - CCNA_02633 0.83 -0.3 2,784,765 - CCNA_02633 0.83 +0.6 2,784,796 - CCNA_02633 0.85 -0.2 2,784,815 + CCNA_02633 0.85 -0.1 2,784,831 + CCNA_02633 0.86 +0.8 2,784,847 + CCNA_02633 0.87 -0.3 2,784,855 - CCNA_02633 0.87 -0.4 2,784,855 - CCNA_02633 0.87 -0.6 2,784,855 - CCNA_02633 0.87 -0.9 2,784,880 - CCNA_02633 0.88 -0.7 2,784,901 - CCNA_02633 0.89 +1.0 2,784,911 - CCNA_02633 0.89 +0.3 2,784,962 + +0.2 2,784,970 - -0.4 2,784,970 - +0.0 2,784,994 - +0.4 2,785,087 - -0.3 2,785,126 + +0.1 2,785,215 + +0.0 2,785,215 + +0.5 2,785,223 - -0.1 2,785,223 - +0.2 2,785,223 - -0.4 2,785,223 - -0.1 2,785,236 - -0.0 2,785,242 + -0.4 2,786,375 - +0.3 2,786,383 - +0.4
Or see this region's nucleotide sequence